| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300687
Identifier: 146300687
GI number: 146300687
Start: 3481290
End: 3481889
Strand: Reverse
Name: 146300687
Synonym: Fjoh_2938
Alternate gene names: NA
Gene position: 3481889-3481290 (Counterclockwise)
Preceding gene: 146300693
Following gene: 146300686
Centisome position: 57.11
GC content: 34.67
Gene sequence:
>600_bases ATGAAGAAAAAATTACTCCTAAGTTTATGGTTTACATTACTATTTGCTTCAATAGGCTTTCTTTTCTGGCAGAACGAGTT TAAATACAGTCTGCCAACGCCAATTCCTAAAAACTATCATGATATAGCTATGGGAAGTAAAATAAATTTATCGCAATGCT GTCCTTTTGACAACAAGCCGGTTTTCTTTCATTTTTTTAATCCTGACTGCCCGTGCTCACGCTTTAATGTGCCGCATGTG AGTGATCTGATAAAAAAGTATGGCGATAGAATTAACTTTAAAATAGTTGTTTTAAACAAGCACAAAACTTTTACGATTGA AGAAATCCAACAAAAATTTGGAGCCCGGATTCCTGTATATTTTGATGAAGGAATTGCAAAAAAATGCGGTGTAATTTCTA CGCCGCAGGCTGTTCTTTTAGATCCTTCTCATAATTTATATTACCGGGGTAATTACAATAAAACAAGATATTGTACAGAT GCAGAGAGTAATTATGCTCAAATGGCGATCGATTCGCTGTTAAAACAAAACAATTCGCCCTCATTTAATGCTTTAGCTCT AAGAGCTTACGGATGTTCGTTACCAAATTGCACTAAATAA
Upstream 100 bases:
>100_bases TAGGATTGGTGTAGTTTTTTTGGGTTTTTTATAGAATTTGATTGATAATTGTATTAACAAGTGTTTATAATTTCTGTTCT TAATTGCTAAAAAATATTAT
Downstream 100 bases:
>100_bases AATCTATCACTAACTTAATTTTTTACCTATGAAAACAAAAGCCAGTTTGAATGAGCAAGATTATCTGCACAGTTTTATGT CTACAATGACACAAAAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKKKLLLSLWFTLLFASIGFLFWQNEFKYSLPTPIPKNYHDIAMGSKINLSQCCPFDNKPVFFHFFNPDCPCSRFNVPHV SDLIKKYGDRINFKIVVLNKHKTFTIEEIQQKFGARIPVYFDEGIAKKCGVISTPQAVLLDPSHNLYYRGNYNKTRYCTD AESNYAQMAIDSLLKQNNSPSFNALALRAYGCSLPNCTK
Sequences:
>Translated_199_residues MKKKLLLSLWFTLLFASIGFLFWQNEFKYSLPTPIPKNYHDIAMGSKINLSQCCPFDNKPVFFHFFNPDCPCSRFNVPHV SDLIKKYGDRINFKIVVLNKHKTFTIEEIQQKFGARIPVYFDEGIAKKCGVISTPQAVLLDPSHNLYYRGNYNKTRYCTD AESNYAQMAIDSLLKQNNSPSFNALALRAYGCSLPNCTK >Mature_199_residues MKKKLLLSLWFTLLFASIGFLFWQNEFKYSLPTPIPKNYHDIAMGSKINLSQCCPFDNKPVFFHFFNPDCPCSRFNVPHV SDLIKKYGDRINFKIVVLNKHKTFTIEEIQQKFGARIPVYFDEGIAKKCGVISTPQAVLLDPSHNLYYRGNYNKTRYCTD AESNYAQMAIDSLLKQNNSPSFNALALRAYGCSLPNCTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22873; Mature: 22873
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLLLSLWFTLLFASIGFLFWQNEFKYSLPTPIPKNYHDIAMGSKINLSQCCPFDNKP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCCCCC VFFHFFNPDCPCSRFNVPHVSDLIKKYGDRINFKIVVLNKHKTFTIEEIQQKFGARIPVY EEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCEEEHHHHHHHHCCCCCEE FDEGIAKKCGVISTPQAVLLDPSHNLYYRGNYNKTRYCTDAESNYAQMAIDSLLKQNNSP ECCCHHHHCCCCCCCCEEEECCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHHCCCCC SFNALALRAYGCSLPNCTK CCCEEEEEEECCCCCCCCC >Mature Secondary Structure MKKKLLLSLWFTLLFASIGFLFWQNEFKYSLPTPIPKNYHDIAMGSKINLSQCCPFDNKP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCCCCC VFFHFFNPDCPCSRFNVPHVSDLIKKYGDRINFKIVVLNKHKTFTIEEIQQKFGARIPVY EEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCEEEHHHHHHHHCCCCCEE FDEGIAKKCGVISTPQAVLLDPSHNLYYRGNYNKTRYCTDAESNYAQMAIDSLLKQNNSP ECCCHHHHCCCCCCCCEEEECCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHHCCCCC SFNALALRAYGCSLPNCTK CCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA