| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300686
Identifier: 146300686
GI number: 146300686
Start: 3480407
End: 3481261
Strand: Reverse
Name: 146300686
Synonym: Fjoh_2937
Alternate gene names: NA
Gene position: 3481261-3480407 (Counterclockwise)
Preceding gene: 146300687
Following gene: 146300685
Centisome position: 57.1
GC content: 30.53
Gene sequence:
>855_bases ATGAAAACAAAAGCCAGTTTGAATGAGCAAGATTATCTGCACAGTTTTATGTCTACAATGACACAAAAATCAGATACTAT TATTAATTACGTTCTTGTTGTTTATTTTCTTCTCGGAATTGGATTATCATTTAAGTACGATACATTCGAAATAGGAGTGG GAGTAGGAACTCTTAATCTCTTAGCGTATTATTCTGCCAAGTTTTTTATGAAGAATTCAAAATTCTATCAGTATGTTTTG TCTGTTATACTGGCAATATTTATGGCGCAGTACATTTACCAAATGCATGGTTTGTTTGAAATGCATTTTACGGTTTTTAT TGCAAGTACTATTTTAATTATTTACCAAAACTGGAAATTACAAATTCCGCTTACGCTTTTAGTTATACTGCATCATGCTG GTCTGGCTTATTTGCAAAATTTCGTTTTTAACGATGCAAACGGTCTTCAGGTTTATTTTTCTCAGGTAAACTTTGATTTA GAAACCCTGATTATTCATACTGTTTTAGCGGCAGTTGTATTTTTTATGAATGGGTATTGGGCCTATTATTTTAAAGAACA CAGTCAGAATCATATTTCTAAAATTTCTGATGAATATGAATTAGAAAACATGAAACTTGCTTCGGCAAAATTCAGTTCAA TGTCGGCTACAAAAGAATACAATGATTTTATTCACAGAACAACTTTAGATTTAAAGCTTCCGGTTAATTCTGTTTTAAAA TTAATTGATGTTTCAAAAGGTCATACAGATAATGATAAACTGCTGACTTATCTGGATATGATGCGTGAAAGTGCTAAAAA AATCGATGATTTGGTAAATGATATTCATGTAAAATCTACTAATACCAGACATTAA
Upstream 100 bases:
>100_bases AACAATTCGCCCTCATTTAATGCTTTAGCTCTAAGAGCTTACGGATGTTCGTTACCAAATTGCACTAAATAAAATCTATC ACTAACTTAATTTTTTACCT
Downstream 100 bases:
>100_bases AATAATTAAAAACCAACTTCCAAAAAAATACACGCAGCACTACCATTGTTTGTTAATTATTAATAGAAAATTTATGGACA CTAGATTTACCCGCCCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: Gaf Domain Protein
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKTKASLNEQDYLHSFMSTMTQKSDTIINYVLVVYFLLGIGLSFKYDTFEIGVGVGTLNLLAYYSAKFFMKNSKFYQYVL SVILAIFMAQYIYQMHGLFEMHFTVFIASTILIIYQNWKLQIPLTLLVILHHAGLAYLQNFVFNDANGLQVYFSQVNFDL ETLIIHTVLAAVVFFMNGYWAYYFKEHSQNHISKISDEYELENMKLASAKFSSMSATKEYNDFIHRTTLDLKLPVNSVLK LIDVSKGHTDNDKLLTYLDMMRESAKKIDDLVNDIHVKSTNTRH
Sequences:
>Translated_284_residues MKTKASLNEQDYLHSFMSTMTQKSDTIINYVLVVYFLLGIGLSFKYDTFEIGVGVGTLNLLAYYSAKFFMKNSKFYQYVL SVILAIFMAQYIYQMHGLFEMHFTVFIASTILIIYQNWKLQIPLTLLVILHHAGLAYLQNFVFNDANGLQVYFSQVNFDL ETLIIHTVLAAVVFFMNGYWAYYFKEHSQNHISKISDEYELENMKLASAKFSSMSATKEYNDFIHRTTLDLKLPVNSVLK LIDVSKGHTDNDKLLTYLDMMRESAKKIDDLVNDIHVKSTNTRH >Mature_284_residues MKTKASLNEQDYLHSFMSTMTQKSDTIINYVLVVYFLLGIGLSFKYDTFEIGVGVGTLNLLAYYSAKFFMKNSKFYQYVL SVILAIFMAQYIYQMHGLFEMHFTVFIASTILIIYQNWKLQIPLTLLVILHHAGLAYLQNFVFNDANGLQVYFSQVNFDL ETLIIHTVLAAVVFFMNGYWAYYFKEHSQNHISKISDEYELENMKLASAKFSSMSATKEYNDFIHRTTLDLKLPVNSVLK LIDVSKGHTDNDKLLTYLDMMRESAKKIDDLVNDIHVKSTNTRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32924; Mature: 32924
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKASLNEQDYLHSFMSTMTQKSDTIINYVLVVYFLLGIGLSFKYDTFEIGVGVGTLNL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHH LAYYSAKFFMKNSKFYQYVLSVILAIFMAQYIYQMHGLFEMHFTVFIASTILIIYQNWKL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEE QIPLTLLVILHHAGLAYLQNFVFNDANGLQVYFSQVNFDLETLIIHTVLAAVVFFMNGYW EHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHCCHH AYYFKEHSQNHISKISDEYELENMKLASAKFSSMSATKEYNDFIHRTTLDLKLPVNSVLK EEEEHHHCHHHHHHHCHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHH LIDVSKGHTDNDKLLTYLDMMRESAKKIDDLVNDIHVKSTNTRH HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure MKTKASLNEQDYLHSFMSTMTQKSDTIINYVLVVYFLLGIGLSFKYDTFEIGVGVGTLNL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHH LAYYSAKFFMKNSKFYQYVLSVILAIFMAQYIYQMHGLFEMHFTVFIASTILIIYQNWKL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEE QIPLTLLVILHHAGLAYLQNFVFNDANGLQVYFSQVNFDLETLIIHTVLAAVVFFMNGYW EHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHCCHH AYYFKEHSQNHISKISDEYELENMKLASAKFSSMSATKEYNDFIHRTTLDLKLPVNSVLK EEEEHHHCHHHHHHHCHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHH LIDVSKGHTDNDKLLTYLDMMRESAKKIDDLVNDIHVKSTNTRH HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA