| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300646
Identifier: 146300646
GI number: 146300646
Start: 3440407
End: 3440835
Strand: Reverse
Name: 146300646
Synonym: Fjoh_2897
Alternate gene names: NA
Gene position: 3440835-3440407 (Counterclockwise)
Preceding gene: 146300647
Following gene: 146300645
Centisome position: 56.44
GC content: 32.17
Gene sequence:
>429_bases ATGTACAAAGAATTAGAAAAATTTAAATCAAGTAATAGTTTTACTTTTACTGTAAATGATAGTTTAGAAGAAGTTTGCAA TGCTCCGGAAGGAAGTGCAGGGATTTTTGTGGTTTATGAAATTGACGGAGATTCAAAAGAATTAATTATGGTAGGTTCTA CCGGAACAGTTCAAAATGACGGAACTCTTAAAACTAAAAATGGAGGTTTATACGATAAAATTGTAAACGGACATCAATTT GCTAAAACTGGGAGAAAATATTCTTGGCCTGCACAAATGAAATTAGAGAACATTTCTGTTCTTGAAGTAGTTTGGTACGA AACTTTTAATGCAGATGTAAAAGCTATTCCAACTGCAGTTGAAGGACAGGTTTTGCAAAACTTTTTAGATGCAAATGCAA AATTACCTAGATGGAATGTAGCTTTCTAA
Upstream 100 bases:
>100_bases ACTTTTTTACATTTTAAAAACTGAGGCATAGATAGGAAAAACTTAGCATCGGAGAACCTCAGTCCCGATAGCTATCGGGA TAGAAGCTTAAAAAGAAAAT
Downstream 100 bases:
>100_bases AAAGCGGTTTAAATAACAGTAACTACACATTTAAAGCCTTATAGATTCTATAAGGCTTTTGCTTTTTTAAGTTGTATTAA TTCGTGAAATGCTGTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MYKELEKFKSSNSFTFTVNDSLEEVCNAPEGSAGIFVVYEIDGDSKELIMVGSTGTVQNDGTLKTKNGGLYDKIVNGHQF AKTGRKYSWPAQMKLENISVLEVVWYETFNADVKAIPTAVEGQVLQNFLDANAKLPRWNVAF
Sequences:
>Translated_142_residues MYKELEKFKSSNSFTFTVNDSLEEVCNAPEGSAGIFVVYEIDGDSKELIMVGSTGTVQNDGTLKTKNGGLYDKIVNGHQF AKTGRKYSWPAQMKLENISVLEVVWYETFNADVKAIPTAVEGQVLQNFLDANAKLPRWNVAF >Mature_142_residues MYKELEKFKSSNSFTFTVNDSLEEVCNAPEGSAGIFVVYEIDGDSKELIMVGSTGTVQNDGTLKTKNGGLYDKIVNGHQF AKTGRKYSWPAQMKLENISVLEVVWYETFNADVKAIPTAVEGQVLQNFLDANAKLPRWNVAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15795; Mature: 15795
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKELEKFKSSNSFTFTVNDSLEEVCNAPEGSAGIFVVYEIDGDSKELIMVGSTGTVQND CCCHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCC GTLKTKNGGLYDKIVNGHQFAKTGRKYSWPAQMKLENISVLEVVWYETFNADVKAIPTAV CEEEECCCCCHHHHCCCCHHHHCCCCCCCCCCEEECCCEEEEEEEEECCCCCCEECCCCC EGQVLQNFLDANAKLPRWNVAF CHHHHHHHHCCCCCCCEEECCC >Mature Secondary Structure MYKELEKFKSSNSFTFTVNDSLEEVCNAPEGSAGIFVVYEIDGDSKELIMVGSTGTVQND CCCHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCC GTLKTKNGGLYDKIVNGHQFAKTGRKYSWPAQMKLENISVLEVVWYETFNADVKAIPTAV CEEEECCCCCHHHHCCCCHHHHCCCCCCCCCCEEECCCEEEEEEEEECCCCCCEECCCCC EGQVLQNFLDANAKLPRWNVAF CHHHHHHHHCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA