| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300537
Identifier: 146300537
GI number: 146300537
Start: 3320224
End: 3321426
Strand: Direct
Name: 146300537
Synonym: Fjoh_2787
Alternate gene names: NA
Gene position: 3320224-3321426 (Clockwise)
Preceding gene: 146300536
Following gene: 146300538
Centisome position: 54.46
GC content: 32.0
Gene sequence:
>1203_bases ATGAATTTCAAAAGAATATTTTTAATCCTATTAATCGCTTCGGCGTACAATTCTTTTGCTCAAAAAGATGGTTATTGGGA TAAAGAGCGTGCCACAACAAAAGAAATTTTAGTTTCTGCCGGAGATCGTATTGTTGTAAAAACAGAAGATCTGCCAGTAG GAACAACTGAAATTGTTTACAGAATTACACTTCTGGATAAAAACCAGCAAATGGCCAATAGTCTGGTTTCTCTTCTAAAA TCAATTCCCGATCCATACGGAATTGGACAAGGCTCTGCAGGAGCTGTTTTTTTAATGTCTAATATTTCCGGAGACGATCA ATGCACTTATTCGCTTTTTACTTCCAGCGAAAACACTAAAAAATATATAACTGACGGTAAAGTTGATAATGCCTGTTTTT CGCAAAAAGAACCAGTAAGCAAAGACGCAAAACGTATTTCATTAGATAAAAATTCTTGTTTAAAAGAAAATACAAAAGCA ATTTGGTTTGGTTTTGAAAGCAAAAACTGGTTTTTAAGCCAAAAAGTAGTTTTAGAAGTTGTGCCGTGGGTTGATGTAAA ATTAAACAGAGGCTGGAATCAGGATAACAAAAATGAAATTATCAGTCTTTGCAAAACCTCTACAATGGCACAGAAAATGG CCAATTCTGATGATTTTTGTGTTTGTATTTTAGAGAAAATCATGAAACAATATCGTTATTCTGAATTTCAAAAACTACTT GCCGTTGAAAAAACAAAAGTCTATAAGGACTTTGGAAATGTATGTTATAAAGATGCCGACATTTCTAAAAACGTGTATAA CGATTTAAGAAATCAGGTTTCAGGTTTAATAAAACAGCAAAAATACAATGAAGCAATTCCAAAATTGGGTACTATTATCA ACGATGGAAAAGCTACAGCATTAGATTACAATTCAATTGGTTACTGCTATATTCTAACCAAACAATATGCAAAAGCATTA AAATTTCTGCAAGAAGGTGAAAAGTTAGACGAAACAGAATTACTTATAAAATTGAATTTGGCACACGTTTATTTGGTGAG TCATAATTACAGCGATGCCAAAGCAATCTATAAAAAATATCAAAATCAAAACGTTACTGACAGCATGAGCTGGAAAGACA AAACAAAATCTGATTTTACTATTTTTGAAAAAGCGGGTTTACCTTCAAAAGACTTCGAAAAAGTTTTAAAACTATACAAC TAA
Upstream 100 bases:
>100_bases ATAATAGTATACATATCGCTTTATAAGAAAGATATTCTCATTTTGTCATTGCTTATGAATGGCAGAATGAGAATAAAAAT AAATAGCTATCATTCAGGTT
Downstream 100 bases:
>100_bases GCAGCTAAGAAACTTAGTATCTCAGCATCTAAAAAAAATGAAAGCGACTTACTACAAATATATGCTGGAGTTTAAACGTC CGTCTGGCACGTCTCGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MNFKRIFLILLIASAYNSFAQKDGYWDKERATTKEILVSAGDRIVVKTEDLPVGTTEIVYRITLLDKNQQMANSLVSLLK SIPDPYGIGQGSAGAVFLMSNISGDDQCTYSLFTSSENTKKYITDGKVDNACFSQKEPVSKDAKRISLDKNSCLKENTKA IWFGFESKNWFLSQKVVLEVVPWVDVKLNRGWNQDNKNEIISLCKTSTMAQKMANSDDFCVCILEKIMKQYRYSEFQKLL AVEKTKVYKDFGNVCYKDADISKNVYNDLRNQVSGLIKQQKYNEAIPKLGTIINDGKATALDYNSIGYCYILTKQYAKAL KFLQEGEKLDETELLIKLNLAHVYLVSHNYSDAKAIYKKYQNQNVTDSMSWKDKTKSDFTIFEKAGLPSKDFEKVLKLYN
Sequences:
>Translated_400_residues MNFKRIFLILLIASAYNSFAQKDGYWDKERATTKEILVSAGDRIVVKTEDLPVGTTEIVYRITLLDKNQQMANSLVSLLK SIPDPYGIGQGSAGAVFLMSNISGDDQCTYSLFTSSENTKKYITDGKVDNACFSQKEPVSKDAKRISLDKNSCLKENTKA IWFGFESKNWFLSQKVVLEVVPWVDVKLNRGWNQDNKNEIISLCKTSTMAQKMANSDDFCVCILEKIMKQYRYSEFQKLL AVEKTKVYKDFGNVCYKDADISKNVYNDLRNQVSGLIKQQKYNEAIPKLGTIINDGKATALDYNSIGYCYILTKQYAKAL KFLQEGEKLDETELLIKLNLAHVYLVSHNYSDAKAIYKKYQNQNVTDSMSWKDKTKSDFTIFEKAGLPSKDFEKVLKLYN >Mature_400_residues MNFKRIFLILLIASAYNSFAQKDGYWDKERATTKEILVSAGDRIVVKTEDLPVGTTEIVYRITLLDKNQQMANSLVSLLK SIPDPYGIGQGSAGAVFLMSNISGDDQCTYSLFTSSENTKKYITDGKVDNACFSQKEPVSKDAKRISLDKNSCLKENTKA IWFGFESKNWFLSQKVVLEVVPWVDVKLNRGWNQDNKNEIISLCKTSTMAQKMANSDDFCVCILEKIMKQYRYSEFQKLL AVEKTKVYKDFGNVCYKDADISKNVYNDLRNQVSGLIKQQKYNEAIPKLGTIINDGKATALDYNSIGYCYILTKQYAKAL KFLQEGEKLDETELLIKLNLAHVYLVSHNYSDAKAIYKKYQNQNVTDSMSWKDKTKSDFTIFEKAGLPSKDFEKVLKLYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45613; Mature: 45613
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKRIFLILLIASAYNSFAQKDGYWDKERATTKEILVSAGDRIVVKTEDLPVGTTEIVY CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHEEE RITLLDKNQQMANSLVSLLKSIPDPYGIGQGSAGAVFLMSNISGDDQCTYSLFTSSENTK EEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCC KYITDGKVDNACFSQKEPVSKDAKRISLDKNSCLKENTKAIWFGFESKNWFLSQKVVLEV EEECCCCCCCHHCCCCCCCCHHHHHEECCCHHHHHCCCCEEEEEECCCCCEEHHHHHHHH VPWVDVKLNRGWNQDNKNEIISLCKTSTMAQKMANSDDFCVCILEKIMKQYRYSEFQKLL CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AVEKTKVYKDFGNVCYKDADISKNVYNDLRNQVSGLIKQQKYNEAIPKLGTIINDGKATA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEE LDYNSIGYCYILTKQYAKALKFLQEGEKLDETELLIKLNLAHVYLVSHNYSDAKAIYKKY EECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEECCCCHHHHHHHHH QNQNVTDSMSWKDKTKSDFTIFEKAGLPSKDFEKVLKLYN CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure MNFKRIFLILLIASAYNSFAQKDGYWDKERATTKEILVSAGDRIVVKTEDLPVGTTEIVY CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHEEE RITLLDKNQQMANSLVSLLKSIPDPYGIGQGSAGAVFLMSNISGDDQCTYSLFTSSENTK EEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCC KYITDGKVDNACFSQKEPVSKDAKRISLDKNSCLKENTKAIWFGFESKNWFLSQKVVLEV EEECCCCCCCHHCCCCCCCCHHHHHEECCCHHHHHCCCCEEEEEECCCCCEEHHHHHHHH VPWVDVKLNRGWNQDNKNEIISLCKTSTMAQKMANSDDFCVCILEKIMKQYRYSEFQKLL CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AVEKTKVYKDFGNVCYKDADISKNVYNDLRNQVSGLIKQQKYNEAIPKLGTIINDGKATA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEE LDYNSIGYCYILTKQYAKALKFLQEGEKLDETELLIKLNLAHVYLVSHNYSDAKAIYKKY EECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEECCCCHHHHHHHHH QNQNVTDSMSWKDKTKSDFTIFEKAGLPSKDFEKVLKLYN CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA