| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300536
Identifier: 146300536
GI number: 146300536
Start: 3319450
End: 3320127
Strand: Direct
Name: 146300536
Synonym: Fjoh_2786
Alternate gene names: NA
Gene position: 3319450-3320127 (Clockwise)
Preceding gene: 146300535
Following gene: 146300537
Centisome position: 54.45
GC content: 33.33
Gene sequence:
>678_bases ATGAAAATAACATTCTACGGACACGCCTCTTTAGCGATTGAAGTTGGAGGAAAACACATTATTGTCGATCCTTTTATTAC AGGAAATCCACAAGCGGCAGCTATCGATATAAATACATTAAAAGCTGATTATATTTTATTGACTCACGCACATGGCGATC ATGTTTTAGATGTTGAAACAATTGCAAAAAATACAAATGCAGTTATTGTTTCAAATGCTGAAATTACAAGCTATTATGCT AAAAAAGGCTTTAATTCACATCCAATGAATCATGGCGGAAGCTGGAAATTCGATTTTGGAAAAGTAAAATACGTTAATGC AATTCACTCAAGTTCTTTCCCTGACGGAACATACGGAGGAAATCCTGGAGGATTTGTTATCGAAGGCGAACATAAAAACA TTTACATCGCAGGCGATACAGCGCTTACGTATGACATGAAATTGATTCCGCTTAGAACAAAATTAGATTTAGCTATTCTT CCAATTGGAAATAATTTTACAATGGATGTAGAAGATGCTATTATCGCATCAGACTTTATAGAGTGCGATAAAATCTTAGG ATATCACTTTGATACTTTTGGCTATATCGAAATCAATCACGAAGAATCAATTAAAAAATTCTTTGACAAAGGAAAAGATT TGATGCTTTTAGCAATTGGTGAATCTATAGAATTATAA
Upstream 100 bases:
>100_bases TACTATTAACTGTCTGCATGATTTCATTAATAGCAGATATTTTTGTTAATCTTTTCTTAGGCGGAAGATAAAAATCAAGT TCAATTTAAAATTAAAAAAA
Downstream 100 bases:
>100_bases TAGTATACATATCGCTTTATAAGAAAGATATTCTCATTTTGTCATTGCTTATGAATGGCAGAATGAGAATAAAAATAAAT AGCTATCATTCAGGTTATGA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MKITFYGHASLAIEVGGKHIIVDPFITGNPQAAAIDINTLKADYILLTHAHGDHVLDVETIAKNTNAVIVSNAEITSYYA KKGFNSHPMNHGGSWKFDFGKVKYVNAIHSSSFPDGTYGGNPGGFVIEGEHKNIYIAGDTALTYDMKLIPLRTKLDLAIL PIGNNFTMDVEDAIIASDFIECDKILGYHFDTFGYIEINHEESIKKFFDKGKDLMLLAIGESIEL
Sequences:
>Translated_225_residues MKITFYGHASLAIEVGGKHIIVDPFITGNPQAAAIDINTLKADYILLTHAHGDHVLDVETIAKNTNAVIVSNAEITSYYA KKGFNSHPMNHGGSWKFDFGKVKYVNAIHSSSFPDGTYGGNPGGFVIEGEHKNIYIAGDTALTYDMKLIPLRTKLDLAIL PIGNNFTMDVEDAIIASDFIECDKILGYHFDTFGYIEINHEESIKKFFDKGKDLMLLAIGESIEL >Mature_225_residues MKITFYGHASLAIEVGGKHIIVDPFITGNPQAAAIDINTLKADYILLTHAHGDHVLDVETIAKNTNAVIVSNAEITSYYA KKGFNSHPMNHGGSWKFDFGKVKYVNAIHSSSFPDGTYGGNPGGFVIEGEHKNIYIAGDTALTYDMKLIPLRTKLDLAIL PIGNNFTMDVEDAIIASDFIECDKILGYHFDTFGYIEINHEESIKKFFDKGKDLMLLAIGESIEL
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2786_FLAJ1 (A5FG55)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001195127.1 - ProteinModelPortal: A5FG55 - STRING: A5FG55 - GeneID: 5093231 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_2786 - eggNOG: COG2220 - HOGENOM: HBG741314 - OMA: VILLTHG - ProtClustDB: CLSK851641 - BioCyc: FJOH376686:FJOH_2786-MONOMER - HAMAP: MF_00457 - InterPro: IPR001279 - InterPro: IPR022877 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: NA
Molecular weight: Translated: 24756; Mature: 24756
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00147 ARGINASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITFYGHASLAIEVGGKHIIVDPFITGNPQAAAIDINTLKADYILLTHAHGDHVLDVET CEEEEEECEEEEEEECCCEEEECCEECCCCCEEEEEEEEEEEEEEEEEECCCCEEEEHHH IAKNTNAVIVSNAEITSYYAKKGFNSHPMNHGGSWKFDFGKVKYVNAIHSSSFPDGTYGG HCCCCCEEEEECCHHEEHHHHCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCC NPGGFVIEGEHKNIYIAGDTALTYDMKLIPLRTKLDLAILPIGNNFTMDVEDAIIASDFI CCCCEEEECCCCEEEEECCCEEEEEEEEEEEEEECCEEEEEECCCEEEEHHHHHHHHHHH ECDKILGYHFDTFGYIEINHEESIKKFFDKGKDLMLLAIGESIEL HHHHHHCEECCCEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCC >Mature Secondary Structure MKITFYGHASLAIEVGGKHIIVDPFITGNPQAAAIDINTLKADYILLTHAHGDHVLDVET CEEEEEECEEEEEEECCCEEEECCEECCCCCEEEEEEEEEEEEEEEEEECCCCEEEEHHH IAKNTNAVIVSNAEITSYYAKKGFNSHPMNHGGSWKFDFGKVKYVNAIHSSSFPDGTYGG HCCCCCEEEEECCHHEEHHHHCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCC NPGGFVIEGEHKNIYIAGDTALTYDMKLIPLRTKLDLAILPIGNNFTMDVEDAIIASDFI CCCCEEEECCCCEEEEECCCEEEEEEEEEEEEEECCEEEEEECCCEEEEHHHHHHHHHHH ECDKILGYHFDTFGYIEINHEESIKKFFDKGKDLMLLAIGESIEL HHHHHHCEECCCEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA