| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is menC [C]
Identifier: 146300538
GI number: 146300538
Start: 3321464
End: 3322531
Strand: Direct
Name: menC [C]
Synonym: Fjoh_2788
Alternate gene names: 146300538
Gene position: 3321464-3322531 (Clockwise)
Preceding gene: 146300537
Following gene: 146300541
Centisome position: 54.48
GC content: 34.46
Gene sequence:
>1068_bases ATGAAAGCGACTTACTACAAATATATGCTGGAGTTTAAACGTCCGTCTGGCACGTCTCGAGGCATTATGACCGAAAAAGA AACCTGGTTTATTATTCTCGAAGAAAATGGTAAAAAAGGAATAGGCGAGTGTGGTATTCTCCGCAGTTTAAGTGCTGATG ACCGTGACGATTATGAAGAAAAACTAAAGTGGACCTGCGAAAATATTCATTTAGGTGAAAAAGCACTTTGGGAATCTTTA ATGGAATTTCCATCGATTCAATTTGGAGTCGAAATGGCTTTTTTATCTCTTAAAAGTGAAAATCCATTTTTACTTTTTCC TTCTGATTTTACAAACAATTCAAAATCAATTGTAATAAATGGCTTGGTCTGGATGGGGGAGCCGGCTTTTATGAAAGAAC AAATTGAAGAAAAATTAGCCGCAGGTTTTAACTGTATTAAACTTAAAATCGGGGCAATTGATTTTCAAAAAGAACTAGAA TTATTAGCTTTTATCCGCAGTCATTTTTCTGCCGAAGAAATCGAAATTCGTGTAGATGCAAATGGTGCTTTTGCTTTAAA TGAAGCTTTAGATAAATTAAACCAATTATATAAATTTCAGCTGCATAGTATAGAACAGCCAATTAAAAAAGGAAACATCC AGGCAATGGCTGATTTATGTAAAATTACTCCTTTTCCAATAGCTTTGGATGAAGAATTAATCGGTATATTTTCATTCAAA GACAAAGAAAAATTATTGCAGGAAATCATGCCACAGTATATTATTTTAAAACCAAGTTTTATTGGTGGTTTTAGAGGAAC GCTGGAATGGATTACATTGGCAGAAAAATACAATATTGGCTGGTGGATAACTTCTGCATTAGAGAGCAATATAGGTTTAA ATGCCATTGCACAATGGACTCATACTCTAAATTCTAAAATACCTCAAGGACTTGGAACCGGAGCACTTTATACCAATAAT TTTGATTGTCCGCTTGAAGTCTCAAAAGGCCAGTTATGGTACAGCGAATCTCAAAAATGGGATTCGGAAATTTTAAAAAA GGTGCAGAGTAACAAAGGTGCAGAGTAA
Upstream 100 bases:
>100_bases ATTTTTGAAAAAGCGGGTTTACCTTCAAAAGACTTCGAAAAAGTTTTAAAACTATACAACTAAGCAGCTAAGAAACTTAG TATCTCAGCATCTAAAAAAA
Downstream 100 bases:
>100_bases CAAAGGTGCAGAGTAACAAATGTACAACAATTGAACCTTTGCCACTCTGCACCTCTGAACCTTTTTTTTTACTCTTTCCC TCCAAGAAGGCTTTCCTGCC
Product: mandelate racemase/muconate lactonizing protein
Products: O-Succinylbenzoate; H2O. [C]
Alternate protein names: Chloromuconate Cycloisomerase; Mandelate Racemase/Muconate Lactonizing Family Protein; O-Succinylbenzoic Acid Synthetase; O-Succinylbenzoate Synthase; O-Succinylbenzoate-CoA Synthase; Mandelate Racemase/Muconate Lactonizing; N-Acylamino Acid Racemase; Muconate Cycloisomerase I Protein; O-Succinylbenzoate Synthase II MenC; L-Alanine-DL-Glutamate Epimerase; O-Succinylbenzoic Acid Synthase; Muconate Cycloisomerase
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKATYYKYMLEFKRPSGTSRGIMTEKETWFIILEENGKKGIGECGILRSLSADDRDDYEEKLKWTCENIHLGEKALWESL MEFPSIQFGVEMAFLSLKSENPFLLFPSDFTNNSKSIVINGLVWMGEPAFMKEQIEEKLAAGFNCIKLKIGAIDFQKELE LLAFIRSHFSAEEIEIRVDANGAFALNEALDKLNQLYKFQLHSIEQPIKKGNIQAMADLCKITPFPIALDEELIGIFSFK DKEKLLQEIMPQYIILKPSFIGGFRGTLEWITLAEKYNIGWWITSALESNIGLNAIAQWTHTLNSKIPQGLGTGALYTNN FDCPLEVSKGQLWYSESQKWDSEILKKVQSNKGAE
Sequences:
>Translated_355_residues MKATYYKYMLEFKRPSGTSRGIMTEKETWFIILEENGKKGIGECGILRSLSADDRDDYEEKLKWTCENIHLGEKALWESL MEFPSIQFGVEMAFLSLKSENPFLLFPSDFTNNSKSIVINGLVWMGEPAFMKEQIEEKLAAGFNCIKLKIGAIDFQKELE LLAFIRSHFSAEEIEIRVDANGAFALNEALDKLNQLYKFQLHSIEQPIKKGNIQAMADLCKITPFPIALDEELIGIFSFK DKEKLLQEIMPQYIILKPSFIGGFRGTLEWITLAEKYNIGWWITSALESNIGLNAIAQWTHTLNSKIPQGLGTGALYTNN FDCPLEVSKGQLWYSESQKWDSEILKKVQSNKGAE >Mature_355_residues MKATYYKYMLEFKRPSGTSRGIMTEKETWFIILEENGKKGIGECGILRSLSADDRDDYEEKLKWTCENIHLGEKALWESL MEFPSIQFGVEMAFLSLKSENPFLLFPSDFTNNSKSIVINGLVWMGEPAFMKEQIEEKLAAGFNCIKLKIGAIDFQKELE LLAFIRSHFSAEEIEIRVDANGAFALNEALDKLNQLYKFQLHSIEQPIKKGNIQAMADLCKITPFPIALDEELIGIFSFK DKEKLLQEIMPQYIILKPSFIGGFRGTLEWITLAEKYNIGWWITSALESNIGLNAIAQWTHTLNSKIPQGLGTGALYTNN FDCPLEVSKGQLWYSESQKWDSEILKKVQSNKGAE
Specific function: Converts Shchc To Osb. [C]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.- [C]
Molecular weight: Translated: 40459; Mature: 40459
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00909 MR_MLE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATYYKYMLEFKRPSGTSRGIMTEKETWFIILEENGKKGIGECGILRSLSADDRDDYEE CCCHHEEHHHEECCCCCCCCCCEECCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCHHH KLKWTCENIHLGEKALWESLMEFPSIQFGVEMAFLSLKSENPFLLFPSDFTNNSKSIVIN HHHEECCCCCCCHHHHHHHHHHCCCHHHHHEEEEEEECCCCCEEEECCCCCCCCCEEEEE GLVWMGEPAFMKEQIEEKLAAGFNCIKLKIGAIDFQKELELLAFIRSHFSAEEIEIRVDA EEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECC NGAFALNEALDKLNQLYKFQLHSIEQPIKKGNIQAMADLCKITPFPIALDEELIGIFSFK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCHHHEEECCC DKEKLLQEIMPQYIILKPSFIGGFRGTLEWITLAEKYNIGWWITSALESNIGLNAIAQWT CHHHHHHHHCCCEEEECCCCCCCCCHHHHHEEEHHHCCCCEEEHHHHHCCCCHHHHHHHH HTLNSKIPQGLGTGALYTNNFDCPLEVSKGQLWYSESQKWDSEILKKVQSNKGAE HHHHHHCCCCCCCCCEEECCCCCCEEECCCEEEECCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKATYYKYMLEFKRPSGTSRGIMTEKETWFIILEENGKKGIGECGILRSLSADDRDDYEE CCCHHEEHHHEECCCCCCCCCCEECCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCHHH KLKWTCENIHLGEKALWESLMEFPSIQFGVEMAFLSLKSENPFLLFPSDFTNNSKSIVIN HHHEECCCCCCCHHHHHHHHHHCCCHHHHHEEEEEEECCCCCEEEECCCCCCCCCEEEEE GLVWMGEPAFMKEQIEEKLAAGFNCIKLKIGAIDFQKELELLAFIRSHFSAEEIEIRVDA EEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECC NGAFALNEALDKLNQLYKFQLHSIEQPIKKGNIQAMADLCKITPFPIALDEELIGIFSFK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCHHHEEECCC DKEKLLQEIMPQYIILKPSFIGGFRGTLEWITLAEKYNIGWWITSALESNIGLNAIAQWT CHHHHHHHHCCCEEEECCCCCCCCCHHHHHEEEHHHCCCCEEEHHHHHCCCCHHHHHHHH HTLNSKIPQGLGTGALYTNNFDCPLEVSKGQLWYSESQKWDSEILKKVQSNKGAE HHHHHHCCCCCCCCCEEECCCCCCEEECCCEEEECCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: @SUCC01.txt*2-Succinyl-6-Hydroxy-2,4-Cyclohexadiene-1- Carboxylate! [C]
Specific reaction: @SUCC01.txt*2-Succinyl-6-Hydroxy-2,4-Cyclohexadiene-1- Carboxylate! = O-Succinylbenzoate + H2O. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA