| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300528
Identifier: 146300528
GI number: 146300528
Start: 3310805
End: 3311647
Strand: Direct
Name: 146300528
Synonym: Fjoh_2778
Alternate gene names: NA
Gene position: 3310805-3311647 (Clockwise)
Preceding gene: 146300527
Following gene: 146300531
Centisome position: 54.3
GC content: 36.42
Gene sequence:
>843_bases ATGAAAAAAATACTTATTGCATTAGCTGTTATTTTGGCTCCCTTTGCTGCAGAAGCTCAGGTTAAAACACCGCAGGCGAG TCCAAAAGCATACATCAAACAAACAGTTGGTTTAACCGACGTTGAAGTTACCTATTCAAGACCAGGTGCCAGAGGAAGAG CCGTTTTTGGTAATTTAGTTCCGTTTGGTAAACTTTGGAGAACTGGAGCAAACGAAAATACGATCATTAATTTTAGTGAT GATGTTGTAATTGATGGTAAGACTTTAAAGAAAGGTAAATATGCAATTTATACTATTCCTAAAATCGAAAGCTGGGAAGT TATCTTTTATCTTTCTACAGACAACTGGGGACTTCCTGAAAACTGGAACGATCAGTATGTTGTTTTAAGAACTACTGTAA AAGAAGATGCATTACCAACACCAGTTGAGACTTTCACAATTGGAATTAATGGCTTAGATCCAAACTATGCTTATTTAGAA ATGGCTTGGGAAAACTCTCATGTAGCTTTAAAATTTGAAGTGCCGACAGCTAAAACTGCTGTAGCAAGTATCGAGAAAAC ATTAGCAGGACCAACTTGGAATGATTATTACGCATCTGCTCAGTATTTATTTTCTTCAAACGGAAATATCGAAACAGCAA GAACTTATGTTGATAAAGCTTTAGATATGAGCACTGAAAAGCCATATTATGTTACAAGATTAAAATCGTTAATCCAGGCA AAACAAGGCGATAAAAAAGGAGCAGTTGAAACTGCAAAAGCTTCTTTAGCCGCAGCAGAAGCCGCAAACAATCAGGATTA CGTAAAAATGAATAAAGACAGTATCTCTGAGTGGAGCAGATAA
Upstream 100 bases:
>100_bases GCCGAAAAAATATCACAGCTTAAAGCTTGAATTATATAAAATTTAACATTTGTTAGGTAATTGAATTCGTAATTTTGAAA AAAAACAAATAAACTCTATA
Downstream 100 bases:
>100_bases GGTTTTAATCTCAATATTAAAAAAATCCAAATTCCAAAGACTTACGAGTTTTGGAATTTGGATTTTTTATTTAGATTAAT TTCTTCAGATTATTTCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKKILIALAVILAPFAAEAQVKTPQASPKAYIKQTVGLTDVEVTYSRPGARGRAVFGNLVPFGKLWRTGANENTIINFSD DVVIDGKTLKKGKYAIYTIPKIESWEVIFYLSTDNWGLPENWNDQYVVLRTTVKEDALPTPVETFTIGINGLDPNYAYLE MAWENSHVALKFEVPTAKTAVASIEKTLAGPTWNDYYASAQYLFSSNGNIETARTYVDKALDMSTEKPYYVTRLKSLIQA KQGDKKGAVETAKASLAAAEAANNQDYVKMNKDSISEWSR
Sequences:
>Translated_280_residues MKKILIALAVILAPFAAEAQVKTPQASPKAYIKQTVGLTDVEVTYSRPGARGRAVFGNLVPFGKLWRTGANENTIINFSD DVVIDGKTLKKGKYAIYTIPKIESWEVIFYLSTDNWGLPENWNDQYVVLRTTVKEDALPTPVETFTIGINGLDPNYAYLE MAWENSHVALKFEVPTAKTAVASIEKTLAGPTWNDYYASAQYLFSSNGNIETARTYVDKALDMSTEKPYYVTRLKSLIQA KQGDKKGAVETAKASLAAAEAANNQDYVKMNKDSISEWSR >Mature_280_residues MKKILIALAVILAPFAAEAQVKTPQASPKAYIKQTVGLTDVEVTYSRPGARGRAVFGNLVPFGKLWRTGANENTIINFSD DVVIDGKTLKKGKYAIYTIPKIESWEVIFYLSTDNWGLPENWNDQYVVLRTTVKEDALPTPVETFTIGINGLDPNYAYLE MAWENSHVALKFEVPTAKTAVASIEKTLAGPTWNDYYASAQYLFSSNGNIETARTYVDKALDMSTEKPYYVTRLKSLIQA KQGDKKGAVETAKASLAAAEAANNQDYVKMNKDSISEWSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31042; Mature: 31042
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILIALAVILAPFAAEAQVKTPQASPKAYIKQTVGLTDVEVTYSRPGARGRAVFGNLV CHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCC PFGKLWRTGANENTIINFSDDVVIDGKTLKKGKYAIYTIPKIESWEVIFYLSTDNWGLPE CCHHHHHCCCCCCEEEEECCCEEECCCEECCCCEEEEECCCCCCEEEEEEEECCCCCCCC NWNDQYVVLRTTVKEDALPTPVETFTIGINGLDPNYAYLEMAWENSHVALKFEVPTAKTA CCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCHHHH VASIEKTLAGPTWNDYYASAQYLFSSNGNIETARTYVDKALDMSTEKPYYVTRLKSLIQA HHHHHHHHCCCCCCCHHHCEEEEEECCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHH KQGDKKGAVETAKASLAAAEAANNQDYVKMNKDSISEWSR HCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCC >Mature Secondary Structure MKKILIALAVILAPFAAEAQVKTPQASPKAYIKQTVGLTDVEVTYSRPGARGRAVFGNLV CHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCC PFGKLWRTGANENTIINFSDDVVIDGKTLKKGKYAIYTIPKIESWEVIFYLSTDNWGLPE CCHHHHHCCCCCCEEEEECCCEEECCCEECCCCEEEEECCCCCCEEEEEEEECCCCCCCC NWNDQYVVLRTTVKEDALPTPVETFTIGINGLDPNYAYLEMAWENSHVALKFEVPTAKTA CCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCHHHH VASIEKTLAGPTWNDYYASAQYLFSSNGNIETARTYVDKALDMSTEKPYYVTRLKSLIQA HHHHHHHHCCCCCCCHHHCEEEEEECCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHH KQGDKKGAVETAKASLAAAEAANNQDYVKMNKDSISEWSR HCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA