Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300528

Identifier: 146300528

GI number: 146300528

Start: 3310805

End: 3311647

Strand: Direct

Name: 146300528

Synonym: Fjoh_2778

Alternate gene names: NA

Gene position: 3310805-3311647 (Clockwise)

Preceding gene: 146300527

Following gene: 146300531

Centisome position: 54.3

GC content: 36.42

Gene sequence:

>843_bases
ATGAAAAAAATACTTATTGCATTAGCTGTTATTTTGGCTCCCTTTGCTGCAGAAGCTCAGGTTAAAACACCGCAGGCGAG
TCCAAAAGCATACATCAAACAAACAGTTGGTTTAACCGACGTTGAAGTTACCTATTCAAGACCAGGTGCCAGAGGAAGAG
CCGTTTTTGGTAATTTAGTTCCGTTTGGTAAACTTTGGAGAACTGGAGCAAACGAAAATACGATCATTAATTTTAGTGAT
GATGTTGTAATTGATGGTAAGACTTTAAAGAAAGGTAAATATGCAATTTATACTATTCCTAAAATCGAAAGCTGGGAAGT
TATCTTTTATCTTTCTACAGACAACTGGGGACTTCCTGAAAACTGGAACGATCAGTATGTTGTTTTAAGAACTACTGTAA
AAGAAGATGCATTACCAACACCAGTTGAGACTTTCACAATTGGAATTAATGGCTTAGATCCAAACTATGCTTATTTAGAA
ATGGCTTGGGAAAACTCTCATGTAGCTTTAAAATTTGAAGTGCCGACAGCTAAAACTGCTGTAGCAAGTATCGAGAAAAC
ATTAGCAGGACCAACTTGGAATGATTATTACGCATCTGCTCAGTATTTATTTTCTTCAAACGGAAATATCGAAACAGCAA
GAACTTATGTTGATAAAGCTTTAGATATGAGCACTGAAAAGCCATATTATGTTACAAGATTAAAATCGTTAATCCAGGCA
AAACAAGGCGATAAAAAAGGAGCAGTTGAAACTGCAAAAGCTTCTTTAGCCGCAGCAGAAGCCGCAAACAATCAGGATTA
CGTAAAAATGAATAAAGACAGTATCTCTGAGTGGAGCAGATAA

Upstream 100 bases:

>100_bases
GCCGAAAAAATATCACAGCTTAAAGCTTGAATTATATAAAATTTAACATTTGTTAGGTAATTGAATTCGTAATTTTGAAA
AAAAACAAATAAACTCTATA

Downstream 100 bases:

>100_bases
GGTTTTAATCTCAATATTAAAAAAATCCAAATTCCAAAGACTTACGAGTTTTGGAATTTGGATTTTTTATTTAGATTAAT
TTCTTCAGATTATTTCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKKILIALAVILAPFAAEAQVKTPQASPKAYIKQTVGLTDVEVTYSRPGARGRAVFGNLVPFGKLWRTGANENTIINFSD
DVVIDGKTLKKGKYAIYTIPKIESWEVIFYLSTDNWGLPENWNDQYVVLRTTVKEDALPTPVETFTIGINGLDPNYAYLE
MAWENSHVALKFEVPTAKTAVASIEKTLAGPTWNDYYASAQYLFSSNGNIETARTYVDKALDMSTEKPYYVTRLKSLIQA
KQGDKKGAVETAKASLAAAEAANNQDYVKMNKDSISEWSR

Sequences:

>Translated_280_residues
MKKILIALAVILAPFAAEAQVKTPQASPKAYIKQTVGLTDVEVTYSRPGARGRAVFGNLVPFGKLWRTGANENTIINFSD
DVVIDGKTLKKGKYAIYTIPKIESWEVIFYLSTDNWGLPENWNDQYVVLRTTVKEDALPTPVETFTIGINGLDPNYAYLE
MAWENSHVALKFEVPTAKTAVASIEKTLAGPTWNDYYASAQYLFSSNGNIETARTYVDKALDMSTEKPYYVTRLKSLIQA
KQGDKKGAVETAKASLAAAEAANNQDYVKMNKDSISEWSR
>Mature_280_residues
MKKILIALAVILAPFAAEAQVKTPQASPKAYIKQTVGLTDVEVTYSRPGARGRAVFGNLVPFGKLWRTGANENTIINFSD
DVVIDGKTLKKGKYAIYTIPKIESWEVIFYLSTDNWGLPENWNDQYVVLRTTVKEDALPTPVETFTIGINGLDPNYAYLE
MAWENSHVALKFEVPTAKTAVASIEKTLAGPTWNDYYASAQYLFSSNGNIETARTYVDKALDMSTEKPYYVTRLKSLIQA
KQGDKKGAVETAKASLAAAEAANNQDYVKMNKDSISEWSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31042; Mature: 31042

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILIALAVILAPFAAEAQVKTPQASPKAYIKQTVGLTDVEVTYSRPGARGRAVFGNLV
CHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCC
PFGKLWRTGANENTIINFSDDVVIDGKTLKKGKYAIYTIPKIESWEVIFYLSTDNWGLPE
CCHHHHHCCCCCCEEEEECCCEEECCCEECCCCEEEEECCCCCCEEEEEEEECCCCCCCC
NWNDQYVVLRTTVKEDALPTPVETFTIGINGLDPNYAYLEMAWENSHVALKFEVPTAKTA
CCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCHHHH
VASIEKTLAGPTWNDYYASAQYLFSSNGNIETARTYVDKALDMSTEKPYYVTRLKSLIQA
HHHHHHHHCCCCCCCHHHCEEEEEECCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KQGDKKGAVETAKASLAAAEAANNQDYVKMNKDSISEWSR
HCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCC
>Mature Secondary Structure
MKKILIALAVILAPFAAEAQVKTPQASPKAYIKQTVGLTDVEVTYSRPGARGRAVFGNLV
CHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCC
PFGKLWRTGANENTIINFSDDVVIDGKTLKKGKYAIYTIPKIESWEVIFYLSTDNWGLPE
CCHHHHHCCCCCCEEEEECCCEEECCCEECCCCEEEEECCCCCCEEEEEEEECCCCCCCC
NWNDQYVVLRTTVKEDALPTPVETFTIGINGLDPNYAYLEMAWENSHVALKFEVPTAKTA
CCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCHHHH
VASIEKTLAGPTWNDYYASAQYLFSSNGNIETARTYVDKALDMSTEKPYYVTRLKSLIQA
HHHHHHHHCCCCCCCHHHCEEEEEECCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KQGDKKGAVETAKASLAAAEAANNQDYVKMNKDSISEWSR
HCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA