Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is yxiO [H]

Identifier: 146300498

GI number: 146300498

Start: 3280433

End: 3281752

Strand: Direct

Name: yxiO [H]

Synonym: Fjoh_2748

Alternate gene names: 146300498

Gene position: 3280433-3281752 (Clockwise)

Preceding gene: 146300497

Following gene: 146300503

Centisome position: 53.81

GC content: 32.95

Gene sequence:

>1320_bases
ATGAAAAACCTACAAAAAGGAGATAAGAAACTTTTAAATGCCTGGGCATTTTATGACTGGGCAAATTCAGTTTATACTTT
AACAATTGCATCTGCAGTATTTCCAATTTTTTATGAAACCTTATTCAGCGATCGTGATCATTATATAGATGTTTTTGGAA
TGCATCTTAAAAATTCAGCATTAATAAGTTTTATAACCGCTTTTGCTTTTATGGTGGTTTCATTTATTTCACCTTTATTG
TCTGGTATTGCTGATTATGTTGGAAACAAGAAATCTTTCATGAAGTTTTTCTGTTATGTAGGGGCTTTATCTTGTATGGG
ATTATATTGGTTTGACCTGGATAATATTTATGTTGGTCTTTTATTTTATTTTCTTGGACTTCTTGGATATTGGGGAAGTT
TAGTTTTTTACAACTCATACCTTCCGGATATTGCATTTGAAGAGCAGCAAGACAGAATTAGTGCAAAAGGATATTCATTA
GGATACATTGGAAGTGTTATTTTGTTGATAATCAATTTAGCAATGATAATGAAGCCGGAAGTCTTTAATATTACGGGAGA
TGGTGCAGCGATGAAAGCAATGCGTTATTCTTTTGTAATGGTAGGAGTTTGGTGGATTTTATTCAGCCAGTATACTTATT
ACTATTTACCAAAAGGGAGTAAAGAAACGGGACAAAAACTAACAAGATCTGTTGTATTTAATGGCTTTAAAGAATTAAAA
AAGGTTTGGGCGTTATTGAAACAGAATATTCCTTTAAAACGTTATTTAGGAGGTTTCTTTGTTTCCAGCATGGCTGTTCA
GACTGTAATGCTGGTTGCTACTTATTTTGGTGCACAGGAAATACAATGGTCATCTAAGGAAGAAAGCACTATTGGTTTAA
TTGTCTGTATTTTAATAATTCAATTAGTAGCCGTAGTTGGAGCGGTTCTAACTTCAAGAGCTTCAGAAAAATTTGGCAAC
GTTCCAACTTTAATATTTATTAACGGAATCTGGGCTGTATTTTGTGCTCTTGCATTTTTTATTACGCTGCCAATGCATTT
TTATGTTATGGCAACAATTGCAGGATTTGTAATGGGAGGAATTCAGGCATTATCTCGATCAACATATTCAAAACTATTAC
CGGAAACAGAAGACACAGCATCATTCTTTAGTTTTTATGATGTTGCAGAAAAAATAGGAATTGTAATTGGAATGTGTGTT
TACGGAATTATCGATCAAATCACAGGAAGCCCGCGTGCTGCAATTGTAATTTTAGGTATTTTCTTCGTTACAGCTATTTT
CTTATTAAGAAGAGTACATAAAAAAGACGTTTCAAACTAA

Upstream 100 bases:

>100_bases
TAGCTCAAGTTCATAATTTAATAATGTACGAATTGAATAATTTCTATTTGTTTATCATAAAAAATAGATAAATTCGTAGC
CTGTTAACAAAATCATTTCT

Downstream 100 bases:

>100_bases
TCGAAACGTCTTTAATAACAACCAATATCACGAATTACATGAAATTATTTGATTGATGATTTTTTTGTAATTCGTGATAT
TTCATTTAAATAATCAACCT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MKNLQKGDKKLLNAWAFYDWANSVYTLTIASAVFPIFYETLFSDRDHYIDVFGMHLKNSALISFITAFAFMVVSFISPLL
SGIADYVGNKKSFMKFFCYVGALSCMGLYWFDLDNIYVGLLFYFLGLLGYWGSLVFYNSYLPDIAFEEQQDRISAKGYSL
GYIGSVILLIINLAMIMKPEVFNITGDGAAMKAMRYSFVMVGVWWILFSQYTYYYLPKGSKETGQKLTRSVVFNGFKELK
KVWALLKQNIPLKRYLGGFFVSSMAVQTVMLVATYFGAQEIQWSSKEESTIGLIVCILIIQLVAVVGAVLTSRASEKFGN
VPTLIFINGIWAVFCALAFFITLPMHFYVMATIAGFVMGGIQALSRSTYSKLLPETEDTASFFSFYDVAEKIGIVIGMCV
YGIIDQITGSPRAAIVILGIFFVTAIFLLRRVHKKDVSN

Sequences:

>Translated_439_residues
MKNLQKGDKKLLNAWAFYDWANSVYTLTIASAVFPIFYETLFSDRDHYIDVFGMHLKNSALISFITAFAFMVVSFISPLL
SGIADYVGNKKSFMKFFCYVGALSCMGLYWFDLDNIYVGLLFYFLGLLGYWGSLVFYNSYLPDIAFEEQQDRISAKGYSL
GYIGSVILLIINLAMIMKPEVFNITGDGAAMKAMRYSFVMVGVWWILFSQYTYYYLPKGSKETGQKLTRSVVFNGFKELK
KVWALLKQNIPLKRYLGGFFVSSMAVQTVMLVATYFGAQEIQWSSKEESTIGLIVCILIIQLVAVVGAVLTSRASEKFGN
VPTLIFINGIWAVFCALAFFITLPMHFYVMATIAGFVMGGIQALSRSTYSKLLPETEDTASFFSFYDVAEKIGIVIGMCV
YGIIDQITGSPRAAIVILGIFFVTAIFLLRRVHKKDVSN
>Mature_439_residues
MKNLQKGDKKLLNAWAFYDWANSVYTLTIASAVFPIFYETLFSDRDHYIDVFGMHLKNSALISFITAFAFMVVSFISPLL
SGIADYVGNKKSFMKFFCYVGALSCMGLYWFDLDNIYVGLLFYFLGLLGYWGSLVFYNSYLPDIAFEEQQDRISAKGYSL
GYIGSVILLIINLAMIMKPEVFNITGDGAAMKAMRYSFVMVGVWWILFSQYTYYYLPKGSKETGQKLTRSVVFNGFKELK
KVWALLKQNIPLKRYLGGFFVSSMAVQTVMLVATYFGAQEIQWSSKEESTIGLIVCILIIQLVAVVGAVLTSRASEKFGN
VPTLIFINGIWAVFCALAFFITLPMHFYVMATIAGFVMGGIQALSRSTYSKLLPETEDTASFFSFYDVAEKIGIVIGMCV
YGIIDQITGSPRAAIVILGIFFVTAIFLLRRVHKKDVSN

Specific function: Unknown

COG id: COG2270

COG function: function code R; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49346; Mature: 49346

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]