Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300483

Identifier: 146300483

GI number: 146300483

Start: 3257664

End: 3258911

Strand: Reverse

Name: 146300483

Synonym: Fjoh_2733

Alternate gene names: NA

Gene position: 3258911-3257664 (Counterclockwise)

Preceding gene: 146300484

Following gene: 146300482

Centisome position: 53.45

GC content: 32.85

Gene sequence:

>1248_bases
ATGAGAAAACTATATGCATTATTATTACTTGTACTTTTTAATCAGGTAGTTATGGCTCAAAAAACAGTCACTCTTCAAGA
TTGTGAGAGCCAGTTTTTAAAAAACAATCTTTTTTTGCTAGCCTCTCATTATAATATTGATGCCGCAAAAGCCATGACCA
TTCAGGCCCGAATATGGGATAATCCAAACCTTACTGCAGAATTAAACGCCTATAATCCTGAAAGGGATAAGTTTTTTGAC
ATTGGCAAACAAGGACAAAAAGTATTTGGTATCGAACAGTTAATCTATTTAGGCGGAAAAAAACGTAATGAAGTTAAACT
GGCAAAAACTAACGAACAATTAGCAGAACTTCAGTTCAATGATTTATTAAGAACATTAAAACTGCAGCTGCGCCAGAGTT
TTTACACGGTTTATTACAACACAAAAAGTCTTGAAATAACTGATAAACAATTGGTTCATATTGAAGATTTAATAAACTCC
TACTCTATTCAGGCTCAAAAAGGAAATATTCCTCTGCGAGATGTTGTGCGTTTACAGTCTCTGTATCTAAACTTTAAGAA
CGAACGAATGGAAGTCGTTAACAACAGCATTGAAGAGCAGGCAAATTTAAAATTACTGCTAAATTCAACTGAAACTATTA
TTCCTGATGTTTCTAAAGACGATTTTAATAAATACTTAAAAATAATTCCTTTTGATCTAAAATCTTTTGAAGATGAAGCA
ATTGCCAATCGTCCGGATTATTTAGCCAAACAAAAAGAAATTGAAGCTAATGAACTGAATGTAAAATGGCAAAAATCGCT
TTCTGTACCAGATATAACTTTGGGCGCTAATTATGATCAGCGAAGCGGTGCATTTAATAATGAGGCTAATATTTCTGTTG
GAATTCCGCTGCCGCTTTGGAACAAAAACAAAGGAAATATCAAAAATGCTCAGGCCGTTTTAGCCCAATCTAAAGTAGAA
AAGCAAAACTTTAATCTTCAATTGGAAACCGAAATCACATCGGCATGGAATAAATGGGATGAATCCCGAAAAAACTATGC
AGTTATAAAACCAACTGTAAACTCAGACTTTGAAGCGGTTTATAACGGAATCTTAACCAATTTCCAAAAAAGAAATATCA
GCTTATTAGAATTTACCGATTTTATGGAAAGTTACAATCAGGCTAATATTCAGGTTAATGAATTGAAGAAAAAATTGGCT
TTATCCGGCGAAGAATTAAATACTACTATCAACAAGGATTTATTTTAA

Upstream 100 bases:

>100_bases
ATTCTTTCATTAATATTTTATTTTAAGCTAATTTTAAGGTAGATTTTAAGCCCGCTTAAAGTCTGCCGATAGCATATTTG
TACAAAATAAAATAGATACA

Downstream 100 bases:

>100_bases
AACTAAATAATAATGAAACATACACTAATTATAGGAATTGCAATAGTAAGTTTATCACTTGCCAGCTGCAAAAAGGAAGT
AGAAAATCCTCAAACCAATA

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Cation Efflux System Protein CzcC; Chemiosmotic Efflux System C Protein C; Outer Membrane Protein; Cation Efflux-Related Outer Membrane Exported Protein; LC Outer Membrane Protein; Outer Membrane Cobalt-Zinc-Cadmium Resistance Protein CzcC; Heavy Metal Efflux Pump; Cation Efflux System Protein; Chemiosmotic Efflux System Protein C; LC-Related Efflux Protein; Outer Membrane Protein lC

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRKLYALLLLVLFNQVVMAQKTVTLQDCESQFLKNNLFLLASHYNIDAAKAMTIQARIWDNPNLTAELNAYNPERDKFFD
IGKQGQKVFGIEQLIYLGGKKRNEVKLAKTNEQLAELQFNDLLRTLKLQLRQSFYTVYYNTKSLEITDKQLVHIEDLINS
YSIQAQKGNIPLRDVVRLQSLYLNFKNERMEVVNNSIEEQANLKLLLNSTETIIPDVSKDDFNKYLKIIPFDLKSFEDEA
IANRPDYLAKQKEIEANELNVKWQKSLSVPDITLGANYDQRSGAFNNEANISVGIPLPLWNKNKGNIKNAQAVLAQSKVE
KQNFNLQLETEITSAWNKWDESRKNYAVIKPTVNSDFEAVYNGILTNFQKRNISLLEFTDFMESYNQANIQVNELKKKLA
LSGEELNTTINKDLF

Sequences:

>Translated_415_residues
MRKLYALLLLVLFNQVVMAQKTVTLQDCESQFLKNNLFLLASHYNIDAAKAMTIQARIWDNPNLTAELNAYNPERDKFFD
IGKQGQKVFGIEQLIYLGGKKRNEVKLAKTNEQLAELQFNDLLRTLKLQLRQSFYTVYYNTKSLEITDKQLVHIEDLINS
YSIQAQKGNIPLRDVVRLQSLYLNFKNERMEVVNNSIEEQANLKLLLNSTETIIPDVSKDDFNKYLKIIPFDLKSFEDEA
IANRPDYLAKQKEIEANELNVKWQKSLSVPDITLGANYDQRSGAFNNEANISVGIPLPLWNKNKGNIKNAQAVLAQSKVE
KQNFNLQLETEITSAWNKWDESRKNYAVIKPTVNSDFEAVYNGILTNFQKRNISLLEFTDFMESYNQANIQVNELKKKLA
LSGEELNTTINKDLF
>Mature_415_residues
MRKLYALLLLVLFNQVVMAQKTVTLQDCESQFLKNNLFLLASHYNIDAAKAMTIQARIWDNPNLTAELNAYNPERDKFFD
IGKQGQKVFGIEQLIYLGGKKRNEVKLAKTNEQLAELQFNDLLRTLKLQLRQSFYTVYYNTKSLEITDKQLVHIEDLINS
YSIQAQKGNIPLRDVVRLQSLYLNFKNERMEVVNNSIEEQANLKLLLNSTETIIPDVSKDDFNKYLKIIPFDLKSFEDEA
IANRPDYLAKQKEIEANELNVKWQKSLSVPDITLGANYDQRSGAFNNEANISVGIPLPLWNKNKGNIKNAQAVLAQSKVE
KQNFNLQLETEITSAWNKWDESRKNYAVIKPTVNSDFEAVYNGILTNFQKRNISLLEFTDFMESYNQANIQVNELKKKLA
LSGEELNTTINKDLF

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47842; Mature: 47842

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLYALLLLVLFNQVVMAQKTVTLQDCESQFLKNNLFLLASHYNIDAAKAMTIQARIWD
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEC
NPNLTAELNAYNPERDKFFDIGKQGQKVFGIEQLIYLGGKKRNEVKLAKTNEQLAELQFN
CCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHH
DLLRTLKLQLRQSFYTVYYNTKSLEITDKQLVHIEDLINSYSIQAQKGNIPLRDVVRLQS
HHHHHHHHHHHHCEEEEEEECCEEEECHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
LYLNFKNERMEVVNNSIEEQANLKLLLNSTETIIPDVSKDDFNKYLKIIPFDLKSFEDEA
HHHCCCHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCHHHHHHHHEEEECCHHCCCCHH
IANRPDYLAKQKEIEANELNVKWQKSLSVPDITLGANYDQRSGAFNNEANISVGIPLPLW
HCCCCHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCC
NKNKGNIKNAQAVLAQSKVEKQNFNLQLETEITSAWNKWDESRKNYAVIKPTVNSDFEAV
CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
YNGILTNFQKRNISLLEFTDFMESYNQANIQVNELKKKLALSGEELNTTINKDLF
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHCCCCCCCCC
>Mature Secondary Structure
MRKLYALLLLVLFNQVVMAQKTVTLQDCESQFLKNNLFLLASHYNIDAAKAMTIQARIWD
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEC
NPNLTAELNAYNPERDKFFDIGKQGQKVFGIEQLIYLGGKKRNEVKLAKTNEQLAELQFN
CCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHH
DLLRTLKLQLRQSFYTVYYNTKSLEITDKQLVHIEDLINSYSIQAQKGNIPLRDVVRLQS
HHHHHHHHHHHHCEEEEEEECCEEEECHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
LYLNFKNERMEVVNNSIEEQANLKLLLNSTETIIPDVSKDDFNKYLKIIPFDLKSFEDEA
HHHCCCHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCHHHHHHHHEEEECCHHCCCCHH
IANRPDYLAKQKEIEANELNVKWQKSLSVPDITLGANYDQRSGAFNNEANISVGIPLPLW
HCCCCHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCC
NKNKGNIKNAQAVLAQSKVEKQNFNLQLETEITSAWNKWDESRKNYAVIKPTVNSDFEAV
CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
YNGILTNFQKRNISLLEFTDFMESYNQANIQVNELKKKLALSGEELNTTINKDLF
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA