| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is ywbO [H]
Identifier: 146300468
GI number: 146300468
Start: 3240365
End: 3240994
Strand: Reverse
Name: ywbO [H]
Synonym: Fjoh_2718
Alternate gene names: 146300468
Gene position: 3240994-3240365 (Counterclockwise)
Preceding gene: 146300470
Following gene: 146300457
Centisome position: 53.16
GC content: 35.56
Gene sequence:
>630_bases ATGAAAATAGAAATTTGGTCGGACATCATGTGTCCGTTTTGTTATATCGGAAAAAGGCAATTGGAAACGGCCTTACAACA GTTTCCAGATAACGACTTTGAAATTGAATGGAAAAGTTTTCAGCTTGATCCAACAATTACGCCTGAGCCGGGAAAAGACG TTTATACGTATTTAGCGGAACGAAAAGGAATGACAGTCGAGCAATCTAAAGAAATGCACAAAGGTGTCGCAGAACGTGCT AAAAGCGTTGGTTTAGAGTATAACTTTGACAAAGCAGTTATTTCAAATTCTTTAGAAGCGCATAGAATTATCCAATTGGC TAAAACTAAAAAATTAGGCGACGAAATTGAAGAAATTTTCTTTAAAGCTTATTTTACAGAAGGACGGGATTTAAACGACG GCCCGACTTTAATTGAATTAGCTGAAAAAGCCGGATTAGATAAAAATGATGTTTTAGAAGTATTAAAAAGCGATAATTTA TACTTAAAAGAAGTTGAACACGATATTGAAGAAGCACAGCAAATTGGCGTTCAGGGTGTTCCTTTCTTTGTTTTTGACCG AAAATATGCTGTTTCTGGTGCTCAGCCGGTTGAAGCTTTTGTGCAAACAATAAAAGAAGGTTTAAAATAA
Upstream 100 bases:
>100_bases TTTCTTTTTATATACAAAAATGAATTTCGTTTACTATTATTTACAGCCAACAAAATCTTAAATTTCAGGCCTTAAATAAA TTTTTCTGTATTTTTGTAAA
Downstream 100 bases:
>100_bases AATTTCAATTATAAAAAAAACGGATGAGTAAATTGCTCATCCGTTTTTTTTATAGTTTAATCGCAAAGAAAACTTACTGC TCCCAATAAGGCTGCAATTT
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKIEIWSDIMCPFCYIGKRQLETALQQFPDNDFEIEWKSFQLDPTITPEPGKDVYTYLAERKGMTVEQSKEMHKGVAERA KSVGLEYNFDKAVISNSLEAHRIIQLAKTKKLGDEIEEIFFKAYFTEGRDLNDGPTLIELAEKAGLDKNDVLEVLKSDNL YLKEVEHDIEEAQQIGVQGVPFFVFDRKYAVSGAQPVEAFVQTIKEGLK
Sequences:
>Translated_209_residues MKIEIWSDIMCPFCYIGKRQLETALQQFPDNDFEIEWKSFQLDPTITPEPGKDVYTYLAERKGMTVEQSKEMHKGVAERA KSVGLEYNFDKAVISNSLEAHRIIQLAKTKKLGDEIEEIFFKAYFTEGRDLNDGPTLIELAEKAGLDKNDVLEVLKSDNL YLKEVEHDIEEAQQIGVQGVPFFVFDRKYAVSGAQPVEAFVQTIKEGLK >Mature_209_residues MKIEIWSDIMCPFCYIGKRQLETALQQFPDNDFEIEWKSFQLDPTITPEPGKDVYTYLAERKGMTVEQSKEMHKGVAERA KSVGLEYNFDKAVISNSLEAHRIIQLAKTKKLGDEIEEIFFKAYFTEGRDLNDGPTLIELAEKAGLDKNDVLEVLKSDNL YLKEVEHDIEEAQQIGVQGVPFFVFDRKYAVSGAQPVEAFVQTIKEGLK
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 23875; Mature: 23875
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEIWSDIMCPFCYIGKRQLETALQQFPDNDFEIEWKSFQLDPTITPEPGKDVYTYLAE CEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHH RKGMTVEQSKEMHKGVAERAKSVGLEYNFDKAVISNSLEAHRIIQLAKTKKLGDEIEEIF HCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH FKAYFTEGRDLNDGPTLIELAEKAGLDKNDVLEVLKSDNLYLKEVEHDIEEAQQIGVQGV HHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC PFFVFDRKYAVSGAQPVEAFVQTIKEGLK CEEEECCHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKIEIWSDIMCPFCYIGKRQLETALQQFPDNDFEIEWKSFQLDPTITPEPGKDVYTYLAE CEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHH RKGMTVEQSKEMHKGVAERAKSVGLEYNFDKAVISNSLEAHRIIQLAKTKKLGDEIEEIF HCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH FKAYFTEGRDLNDGPTLIELAEKAGLDKNDVLEVLKSDNLYLKEVEHDIEEAQQIGVQGV HHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC PFFVFDRKYAVSGAQPVEAFVQTIKEGLK CEEEECCHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]