Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300380

Identifier: 146300380

GI number: 146300380

Start: 3120599

End: 3120988

Strand: Reverse

Name: 146300380

Synonym: Fjoh_2625

Alternate gene names: NA

Gene position: 3120988-3120599 (Counterclockwise)

Preceding gene: 146300381

Following gene: 146300379

Centisome position: 51.19

GC content: 33.08

Gene sequence:

>390_bases
ATGTTTACAATCGACCAAATCAAAGAAGCACATTCTAAAGTAAAAAGCGGTGCTGATTTTCCAAATTATATACAAGATTT
AATTATTCTGGGTGTAAAAGGTTATGACACTTTTGTGAATGACGGACACGTTGAATACTATGGTGTAAATGGCTATATCG
TTACATCTGACGAAAAATATAATCTTATTTCAGTTGCGGCAACGGTCAATAAAGAGCTTTTTATTGAATTTCTTGTAAAA
CATCAGCAGGGTGAAACAGATTACTTAACTTTCTGTAATCATGCAGGACAATGCGGTATTGCAAAATGGAGAGTTGATAT
TATCGAAATGACCTGCACGTATTTTGACAGTGCTGAAAATGAAATTTTAATCGAGAAAATTCCAGAATAA

Upstream 100 bases:

>100_bases
ATTTATAAAACCATTAATCGTATTTTTGAAACAATAATTTTTTTTCAATGCAAGGCAATTGCGCTGGAAACCTATATAAC
TAATCTAAAATTAAAATAAT

Downstream 100 bases:

>100_bases
ATTCTAAAATGACAAATTTTAATTCAATTTATTCAACAGCTAAAAAAGGTATCTTTTTGATGCTTTTTTTAGTTTGTTTT
ACAGGATTTTCTCAGCATAA

Product: Phage envelope protein-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKYNLISVAATVNKELFIEFLVK
HQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAENEILIEKIPE

Sequences:

>Translated_129_residues
MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKYNLISVAATVNKELFIEFLVK
HQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAENEILIEKIPE
>Mature_129_residues
MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKYNLISVAATVNKELFIEFLVK
HQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAENEILIEKIPE

Specific function: Unknown

COG id: COG5562

COG function: function code R; Phage envelope protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14683; Mature: 14683

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKY
CCCHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCCCEEEEECCCEEEECCCCC
NLISVAATVNKELFIEFLVKHQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAEN
EEEEEEEHHCHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEHHHHEEEEEEEHHCCCCCC
EILIEKIPE
EEEEEECCC
>Mature Secondary Structure
MFTIDQIKEAHSKVKSGADFPNYIQDLIILGVKGYDTFVNDGHVEYYGVNGYIVTSDEKY
CCCHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCCCEEEEECCCEEEECCCCC
NLISVAATVNKELFIEFLVKHQQGETDYLTFCNHAGQCGIAKWRVDIIEMTCTYFDSAEN
EEEEEEEHHCHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEHHHHEEEEEEEHHCCCCCC
EILIEKIPE
EEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA