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The map label for this gene is ycaP [H]

Identifier: 146300372

GI number: 146300372

Start: 3112980

End: 3113672

Strand: Reverse

Name: ycaP [H]

Synonym: Fjoh_2617

Alternate gene names: 146300372

Gene position: 3113672-3112980 (Counterclockwise)

Preceding gene: 146300373

Following gene: 146300371

Centisome position: 51.07

GC content: 36.94

Gene sequence:

>693_bases
ATGAAAGAAATCTTCGAATGGAATAGGCTCTTTTTTAACGAACTGCCAGAGGTTTTTCTTCTGGAAGTAATATTTCGTTC
GACAGTAATGTTTACCATTTTACTGCTAACGTTAAAACTAGCCGGTAAACGAGGCGTAAAACAATTATCTATTTTCGAAA
CCGTAATTATCATTGCATTAGGTTCTGCTGCGGGCGACCCAATGTTTTATGAAGATGTTGGAATCGTGCCTGCGGCAATT
GTTTTTTTGGTAATTATTACCCTTTATCGTTCTGTAACCTGGCTTACCGGAAAGAGCAAAAAATTTGAAGAGTTTATAGA
AGGCAAAACCGAATGCTTAATCAACGACGGTAAGTTTTCTGTATCGAGTTTTAAAAAAGAAACTTTGGCACAAGACGAAT
TTTTCTCTGAACTCCGCGTAAAATCAATCGAACATTTAGGACAGGTAAAACATGCTTTTATAGAACCAAGCGGCGAAATA
AGTGTGTTTTTCTATGAAGATAAAGAAGTGAAACACGGACTGCCTATTTTACCCGGTTTATTTAATGAAAAAAGTAAAAT
AATCGCAACAGACGGGATTTATGCCTGTACTTTCTGCGGTCATACAGAAGAAGTAAAAAAAGGAACCGCAAGCTGCGAAA
TCTGCCATAAAGATGAATGGGTTCCAGCAATCAAAACCCTTAGAATAACCTAA

Upstream 100 bases:

>100_bases
CTTAGCACCTTATTTTTTAAACCTATAAATATCAGACTAAACAAAGTAAAGTCAAAACCTTAGAATCTTAGCAGCTTAGA
ACCTTAGCACCTTAAAAAAA

Downstream 100 bases:

>100_bases
AATAAAAATCCAAATTCCAAAAGCAAAGCTTAATCCCGATAACTATTGGTATAGCAACTTAAAATATCAGAACCTTAGAA
CCTCAAAAAAATGAGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKEIFEWNRLFFNELPEVFLLEVIFRSTVMFTILLLTLKLAGKRGVKQLSIFETVIIIALGSAAGDPMFYEDVGIVPAAI
VFLVIITLYRSVTWLTGKSKKFEEFIEGKTECLINDGKFSVSSFKKETLAQDEFFSELRVKSIEHLGQVKHAFIEPSGEI
SVFFYEDKEVKHGLPILPGLFNEKSKIIATDGIYACTFCGHTEEVKKGTASCEICHKDEWVPAIKTLRIT

Sequences:

>Translated_230_residues
MKEIFEWNRLFFNELPEVFLLEVIFRSTVMFTILLLTLKLAGKRGVKQLSIFETVIIIALGSAAGDPMFYEDVGIVPAAI
VFLVIITLYRSVTWLTGKSKKFEEFIEGKTECLINDGKFSVSSFKKETLAQDEFFSELRVKSIEHLGQVKHAFIEPSGEI
SVFFYEDKEVKHGLPILPGLFNEKSKIIATDGIYACTFCGHTEEVKKGTASCEICHKDEWVPAIKTLRIT
>Mature_230_residues
MKEIFEWNRLFFNELPEVFLLEVIFRSTVMFTILLLTLKLAGKRGVKQLSIFETVIIIALGSAAGDPMFYEDVGIVPAAI
VFLVIITLYRSVTWLTGKSKKFEEFIEGKTECLINDGKFSVSSFKKETLAQDEFFSELRVKSIEHLGQVKHAFIEPSGEI
SVFFYEDKEVKHGLPILPGLFNEKSKIIATDGIYACTFCGHTEEVKKGTASCEICHKDEWVPAIKTLRIT

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=227, Percent_Identity=42.7312775330396, Blast_Score=198, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 26044; Mature: 26044

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIFEWNRLFFNELPEVFLLEVIFRSTVMFTILLLTLKLAGKRGVKQLSIFETVIIIAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GSAAGDPMFYEDVGIVPAAIVFLVIITLYRSVTWLTGKSKKFEEFIEGKTECLINDGKFS
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCC
VSSFKKETLAQDEFFSELRVKSIEHLGQVKHAFIEPSGEISVFFYEDKEVKHGLPILPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCC
FNEKSKIIATDGIYACTFCGHTEEVKKGTASCEICHKDEWVPAIKTLRIT
CCCCCCEEEECCEEEEEECCCHHHHHCCCCCEEEECCCCCCCHHHEEECC
>Mature Secondary Structure
MKEIFEWNRLFFNELPEVFLLEVIFRSTVMFTILLLTLKLAGKRGVKQLSIFETVIIIAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GSAAGDPMFYEDVGIVPAAIVFLVIITLYRSVTWLTGKSKKFEEFIEGKTECLINDGKFS
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCC
VSSFKKETLAQDEFFSELRVKSIEHLGQVKHAFIEPSGEISVFFYEDKEVKHGLPILPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCC
FNEKSKIIATDGIYACTFCGHTEEVKKGTASCEICHKDEWVPAIKTLRIT
CCCCCCEEEECCEEEEEECCCHHHHHCCCCCEEEECCCCCCCHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]