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The map label for this gene is ybaB [C]

Identifier: 146300310

GI number: 146300310

Start: 3038787

End: 3039107

Strand: Reverse

Name: ybaB [C]

Synonym: Fjoh_2555

Alternate gene names: 146300310

Gene position: 3039107-3038787 (Counterclockwise)

Preceding gene: 146300315

Following gene: 146300308

Centisome position: 49.85

GC content: 31.15

Gene sequence:

>321_bases
ATGGATTTAATGGGAATGATGGGTAAACTTAAAGAAACCCAGCAAAAAATTGAAGATACAAAGAAACGCCTTGATACTGT
TTTAATTGACGAACAAAGCGCTGACGGATTATTAAAAATTACAGTTACTGCAAATAGAAAAGTAAAATCAATCTCTATCG
ATGATTCTCTTTTAGAAGATAAAGAACAATTAGAAGATTACTTAGTTGTAACTCTAAACAAAGTAATCGAAAAAGCAACA
AGTGTAAATGAAAGAGAACTTGATGCTGTTGCCAGAATGGACATGCCTTCTATTCCTGGAATGGATAATTTGTTTAAATA
A

Upstream 100 bases:

>100_bases
ATCACATATAGAACGAAATTAAATTTTTCATAAAATATTCTATTGTAATCATACAGCAATATACTAATTTTGTATGAAAT
AATATTAAAATCAACAAAAA

Downstream 100 bases:

>100_bases
TTTTAAGAAACAAAGGTTCAGAGATACAAAGGGACAAAGGTTTTTTATTATGAAAACCTTGAATCAAAAAAAAGACGCAA
ATAATGCGTCTTTTTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MDLMGMMGKLKETQQKIEDTKKRLDTVLIDEQSADGLLKITVTANRKVKSISIDDSLLEDKEQLEDYLVVTLNKVIEKAT
SVNERELDAVARMDMPSIPGMDNLFK

Sequences:

>Translated_106_residues
MDLMGMMGKLKETQQKIEDTKKRLDTVLIDEQSADGLLKITVTANRKVKSISIDDSLLEDKEQLEDYLVVTLNKVIEKAT
SVNERELDAVARMDMPSIPGMDNLFK
>Mature_106_residues
MDLMGMMGKLKETQQKIEDTKKRLDTVLIDEQSADGLLKITVTANRKVKSISIDDSLLEDKEQLEDYLVVTLNKVIEKAT
SVNERELDAVARMDMPSIPGMDNLFK

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2555_FLAJ1 (A5FGU0)

Other databases:

- EMBL:   CP000685
- RefSeq:   YP_001194901.1
- ProteinModelPortal:   A5FGU0
- STRING:   A5FGU0
- GeneID:   5091069
- GenomeReviews:   CP000685_GR
- KEGG:   fjo:Fjoh_2555
- eggNOG:   NOG120061
- HOGENOM:   HBG734215
- OMA:   MKESKER
- ProtClustDB:   PRK14623
- BioCyc:   FJOH376686:FJOH_2555-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11986; Mature: 11986

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLMGMMGKLKETQQKIEDTKKRLDTVLIDEQSADGLLKITVTANRKVKSISIDDSLLED
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCHHHHHH
KEQLEDYLVVTLNKVIEKATSVNERELDAVARMDMPSIPGMDNLFK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLMGMMGKLKETQQKIEDTKKRLDTVLIDEQSADGLLKITVTANRKVKSISIDDSLLED
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCHHHHHH
KEQLEDYLVVTLNKVIEKATSVNERELDAVARMDMPSIPGMDNLFK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA