| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300254
Identifier: 146300254
GI number: 146300254
Start: 2986285
End: 2986833
Strand: Reverse
Name: 146300254
Synonym: Fjoh_2499
Alternate gene names: NA
Gene position: 2986833-2986285 (Counterclockwise)
Preceding gene: 146300255
Following gene: 146300253
Centisome position: 48.99
GC content: 33.52
Gene sequence:
>549_bases ATGAAAAAAATAATCTCTCTTTTATTACTTTTTACTTTTGGCTTGTCCAGCTGTGAGAAAGATGATATTTGCGACGCAAA TACGCCTACAACTCCCAGACTTGTAATTACATTTTATGATAACGCAGCTCCAACAAGTCTTAAAACGGTTACCAATTTAA AAGTAGTCGGCGAAGGTAAAGAGGATACTGATGCAATTATTTTTAACGAAACCGGAACTTCGGTAACTAAGTATTTAACA AATGCAAATACTATTTCTATTCCGTTAAAAACAGATGCAAAAACAACAACATACAAGTTTATTTATAATGCAACAAGCGC AACTCCAAATATCGATGTTTTGACGTTTAATTATGAAACTCAAAGTGTTTATGTTTCGAGAGCCTGCGGTTTTAAAACCA CTTTTACACTAAATCCTCGTGATAATACAGCCAATTCAGGATTGATAAGAACAGATCCCGCTGGTGACGGACTTTGGATG CTGAATATAAATGTAGTTAATTCTAATATCGAACTTGAAAATGAAACACACGTTAAAGTATACTTTTAG
Upstream 100 bases:
>100_bases AATACAAAGTAACACGTGTACGTCCGGTTGATATGTTCCCTCAAACGCATCATGTTGAAAATGTTGTACTTTTAGAACTT CGATAATTATAAAACTGTAA
Downstream 100 bases:
>100_bases TCTTTGTTTTCTTTTATCAATGTTCTTGGGATATTCTCAGGTGGTAATAAAAGATACCGTAACAGTAAGAGATCTTGATG ATCAAAAACCGAAAACTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKKIISLLLLFTFGLSSCEKDDICDANTPTTPRLVITFYDNAAPTSLKTVTNLKVVGEGKEDTDAIIFNETGTSVTKYLT NANTISIPLKTDAKTTTYKFIYNATSATPNIDVLTFNYETQSVYVSRACGFKTTFTLNPRDNTANSGLIRTDPAGDGLWM LNINVVNSNIELENETHVKVYF
Sequences:
>Translated_182_residues MKKIISLLLLFTFGLSSCEKDDICDANTPTTPRLVITFYDNAAPTSLKTVTNLKVVGEGKEDTDAIIFNETGTSVTKYLT NANTISIPLKTDAKTTTYKFIYNATSATPNIDVLTFNYETQSVYVSRACGFKTTFTLNPRDNTANSGLIRTDPAGDGLWM LNINVVNSNIELENETHVKVYF >Mature_182_residues MKKIISLLLLFTFGLSSCEKDDICDANTPTTPRLVITFYDNAAPTSLKTVTNLKVVGEGKEDTDAIIFNETGTSVTKYLT NANTISIPLKTDAKTTTYKFIYNATSATPNIDVLTFNYETQSVYVSRACGFKTTFTLNPRDNTANSGLIRTDPAGDGLWM LNINVVNSNIELENETHVKVYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20088; Mature: 20088
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIISLLLLFTFGLSSCEKDDICDANTPTTPRLVITFYDNAAPTSLKTVTNLKVVGEGK CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEECCC EDTDAIIFNETGTSVTKYLTNANTISIPLKTDAKTTTYKFIYNATSATPNIDVLTFNYET CCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEECCC QSVYVSRACGFKTTFTLNPRDNTANSGLIRTDPAGDGLWMLNINVVNSNIELENETHVKV CEEEEEECCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEEECEEEECCCEEEEE YF EC >Mature Secondary Structure MKKIISLLLLFTFGLSSCEKDDICDANTPTTPRLVITFYDNAAPTSLKTVTNLKVVGEGK CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEECCC EDTDAIIFNETGTSVTKYLTNANTISIPLKTDAKTTTYKFIYNATSATPNIDVLTFNYET CCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEECCC QSVYVSRACGFKTTFTLNPRDNTANSGLIRTDPAGDGLWMLNINVVNSNIELENETHVKV CEEEEEECCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEEECEEEECCCEEEEE YF EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA