| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300253
Identifier: 146300253
GI number: 146300253
Start: 2985489
End: 2986313
Strand: Reverse
Name: 146300253
Synonym: Fjoh_2498
Alternate gene names: NA
Gene position: 2986313-2985489 (Counterclockwise)
Preceding gene: 146300254
Following gene: 146300249
Centisome position: 48.98
GC content: 33.21
Gene sequence:
>825_bases ATGAAACACACGTTAAAGTATACTTTTAGTCTTTGTTTTCTTTTATCAATGTTCTTGGGATATTCTCAGGTGGTAATAAA AGATACCGTAACAGTAAGAGATCTTGATGATCAAAAACCGAAAACTGAAGTTGCGGCAAAACCTTCAGTCAAAGAAATTA AAAAAGACAGTATTTCTATAAAAACTGATCGTTATGGTTTAAGAGTTGGTGTCGATCTATATAAACTAACCAGAGGCTTT TATGATAAAAATTATAAAGGAATTGAGTTTACAGCAGACTGGCGTTTAACTAAAAAGTATTACATCGCAGCCGAATTAGG TTTTGAAGATAAAACTACAGATGACGATAGATTAAATTCTACAGCTACAGGAACGTACATAAAAGGAGGTTTTGATTATA ATTTATATGACAACTGGCTTGATATGGAAAACCTTATAACGATTGGTTTAAGAGGAGGTTTTAGTTCTTTCAGCCAGGAT TTAAACAGTTATAAAATATACAATCCAAATCCATATTGGGGAGAACAGCCCGCAATGTCAGCAAATCAAAAATACAACGG ATTATCTGCTGCCTGGTTAGAAGTTGCATTGGGAGTAAAAGCCAAAGTTTTCAATAATATCTTTGTTGGATTTGGTGTAC AGCTTAAACTTTTGGCAATGAACAACAAACCTTCAGGATTTGATAATCTTTACATTCCGGGATTCAACAGAACGTATGAC GGAAGTTTTGGAGTAGGATTCAATTACACTGTTTCGTATTTCATTCCTATCTACAAGAAAAAAACAATTGTACCTGAAAT CATAAACCAAGCTCCAAAAAAGTAA
Upstream 100 bases:
>100_bases GATAATACAGCCAATTCAGGATTGATAAGAACAGATCCCGCTGGTGACGGACTTTGGATGCTGAATATAAATGTAGTTAA TTCTAATATCGAACTTGAAA
Downstream 100 bases:
>100_bases CGTTTTAATTCATAAAAAAAGCCCTGAATTTAAAAATTCAGGGCTTTTTTATTTAAGACAACTGAAATTCAACAGCCGCT TTTGCGTGTATTAAAGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKHTLKYTFSLCFLLSMFLGYSQVVIKDTVTVRDLDDQKPKTEVAAKPSVKEIKKDSISIKTDRYGLRVGVDLYKLTRGF YDKNYKGIEFTADWRLTKKYYIAAELGFEDKTTDDDRLNSTATGTYIKGGFDYNLYDNWLDMENLITIGLRGGFSSFSQD LNSYKIYNPNPYWGEQPAMSANQKYNGLSAAWLEVALGVKAKVFNNIFVGFGVQLKLLAMNNKPSGFDNLYIPGFNRTYD GSFGVGFNYTVSYFIPIYKKKTIVPEIINQAPKK
Sequences:
>Translated_274_residues MKHTLKYTFSLCFLLSMFLGYSQVVIKDTVTVRDLDDQKPKTEVAAKPSVKEIKKDSISIKTDRYGLRVGVDLYKLTRGF YDKNYKGIEFTADWRLTKKYYIAAELGFEDKTTDDDRLNSTATGTYIKGGFDYNLYDNWLDMENLITIGLRGGFSSFSQD LNSYKIYNPNPYWGEQPAMSANQKYNGLSAAWLEVALGVKAKVFNNIFVGFGVQLKLLAMNNKPSGFDNLYIPGFNRTYD GSFGVGFNYTVSYFIPIYKKKTIVPEIINQAPKK >Mature_274_residues MKHTLKYTFSLCFLLSMFLGYSQVVIKDTVTVRDLDDQKPKTEVAAKPSVKEIKKDSISIKTDRYGLRVGVDLYKLTRGF YDKNYKGIEFTADWRLTKKYYIAAELGFEDKTTDDDRLNSTATGTYIKGGFDYNLYDNWLDMENLITIGLRGGFSSFSQD LNSYKIYNPNPYWGEQPAMSANQKYNGLSAAWLEVALGVKAKVFNNIFVGFGVQLKLLAMNNKPSGFDNLYIPGFNRTYD GSFGVGFNYTVSYFIPIYKKKTIVPEIINQAPKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31223; Mature: 31223
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHTLKYTFSLCFLLSMFLGYSQVVIKDTVTVRDLDDQKPKTEVAAKPSVKEIKKDSISI CCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCEEE KTDRYGLRVGVDLYKLTRGFYDKNYKGIEFTADWRLTKKYYIAAELGFEDKTTDDDRLNS EECCCEEEECHHHHHHHHHHHCCCCCCEEEEECEEEEEEEEEEEEECCCCCCCCCHHCCC TATGTYIKGGFDYNLYDNWLDMENLITIGLRGGFSSFSQDLNSYKIYNPNPYWGEQPAMS CCCCCEEECCEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHCEEEECCCCCCCCCCCCC ANQKYNGLSAAWLEVALGVKAKVFNNIFVGFGVQLKLLAMNNKPSGFDNLYIPGFNRTYD CCCCCCCCHHHHHHHHHCCHHHHHHCEEEECCEEEEEEEECCCCCCCCCEEECCCCCCCC GSFGVGFNYTVSYFIPIYKKKTIVPEIINQAPKK CCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCC >Mature Secondary Structure MKHTLKYTFSLCFLLSMFLGYSQVVIKDTVTVRDLDDQKPKTEVAAKPSVKEIKKDSISI CCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCEEE KTDRYGLRVGVDLYKLTRGFYDKNYKGIEFTADWRLTKKYYIAAELGFEDKTTDDDRLNS EECCCEEEECHHHHHHHHHHHCCCCCCEEEEECEEEEEEEEEEEEECCCCCCCCCHHCCC TATGTYIKGGFDYNLYDNWLDMENLITIGLRGGFSSFSQDLNSYKIYNPNPYWGEQPAMS CCCCCEEECCEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHCEEEECCCCCCCCCCCCC ANQKYNGLSAAWLEVALGVKAKVFNNIFVGFGVQLKLLAMNNKPSGFDNLYIPGFNRTYD CCCCCCCCHHHHHHHHHCCHHHHHHCEEEECCEEEEEEEECCCCCCCCCEEECCCCCCCC GSFGVGFNYTVSYFIPIYKKKTIVPEIINQAPKK CCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA