Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is gntK [H]
Identifier: 145296486
GI number: 145296486
Start: 2635877
End: 2636380
Strand: Direct
Name: gntK [H]
Synonym: cgR_2397
Alternate gene names: 145296486
Gene position: 2635877-2636380 (Clockwise)
Preceding gene: 145296485
Following gene: 145296487
Centisome position: 79.53
GC content: 58.13
Gene sequence:
>504_bases ATGTCAGCAGCCGAAGGCTTACACATTGTCATTATGGGCGTTTCCGGCTGCGGCAAATCCTCCGTCGGGGAAGCCCTAGC AGCGGAGCTCGGAATCGAATACAAAGACGGCGACGAACTTCACCCCCAGGAAAACATCGACAAGATGGCCTCCGGCCGGG CACTTGACGACGACGACCGTGCATGGTGGCTAGTCCAAGTTGGCAAGTGGCTCCGCGGCCGGCCAAGCGGCGTCATCGCA TGCTCCGCCCTCAAGCGCTCCTACCGCGATCTCCTGCGCACCAAATGCCCAGGAACCGTCTTCGTCCACCTCCACGGCGA CTACGATCTCCTACTTTCCCGCATGAAGGCCCGCGAAGATCACTTCATGCCATCCACCTTGCTAGATTCCCAATTTGCAA CCCTCGAGCCGCTCGAAGATGACGAAGATGGCAAGGTTTTCGACGTTGCCCATACCATCAGCGAACTGGCCGCCCAATCT GCAGAATGGGTTCGCAACAAATAA
Upstream 100 bases:
>100_bases CTTACAAAATTCTCCAAAAGGAGTTATGATAGTACCAATACGTTTTTGTGGCAGCCTCCTGCATTCGGCAGTCGAGACGC CACCAAAGAAAGGGTAAGAC
Downstream 100 bases:
>100_bases ACCCCTAACCCATATTAGAACAAGGATTTGTGCGCTTTTCCTGTTCTGGTGTGGGTTTTCCTCACATCTAACAATCGAAT AACTGTTCGAATAAAAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Gluconate kinase 2 [H]
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSAAEGLHIVIMGVSGCGKSSVGEALAAELGIEYKDGDELHPQENIDKMASGRALDDDDRAWWLVQVGKWLRGRPSGVIA CSALKRSYRDLLRTKCPGTVFVHLHGDYDLLLSRMKAREDHFMPSTLLDSQFATLEPLEDDEDGKVFDVAHTISELAAQS AEWVRNK
Sequences:
>Translated_167_residues MSAAEGLHIVIMGVSGCGKSSVGEALAAELGIEYKDGDELHPQENIDKMASGRALDDDDRAWWLVQVGKWLRGRPSGVIA CSALKRSYRDLLRTKCPGTVFVHLHGDYDLLLSRMKAREDHFMPSTLLDSQFATLEPLEDDEDGKVFDVAHTISELAAQS AEWVRNK >Mature_166_residues SAAEGLHIVIMGVSGCGKSSVGEALAAELGIEYKDGDELHPQENIDKMASGRALDDDDRAWWLVQVGKWLRGRPSGVIAC SALKRSYRDLLRTKCPGTVFVHLHGDYDLLLSRMKAREDHFMPSTLLDSQFATLEPLEDDEDGKVFDVAHTISELAAQSA EWVRNK
Specific function: Gluconate utilization system GNT-I. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=181, Percent_Identity=40.8839779005525, Blast_Score=122, Evalue=1e-28, Organism=Escherichia coli, GI87082265, Length=164, Percent_Identity=44.5121951219512, Blast_Score=135, Evalue=1e-33, Organism=Escherichia coli, GI1790719, Length=164, Percent_Identity=42.6829268292683, Blast_Score=135, Evalue=2e-33, Organism=Caenorhabditis elegans, GI25146487, Length=143, Percent_Identity=48.951048951049, Blast_Score=133, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6320454, Length=141, Percent_Identity=39.0070921985816, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 18455; Mature: 18324
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAEGLHIVIMGVSGCGKSSVGEALAAELGIEYKDGDELHPQENIDKMASGRALDDDDR CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC AWWLVQVGKWLRGRPSGVIACSALKRSYRDLLRTKCPGTVFVHLHGDYDLLLSRMKARED EEEHEEHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH HFMPSTLLDSQFATLEPLEDDEDGKVFDVAHTISELAAQSAEWVRNK CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAAEGLHIVIMGVSGCGKSSVGEALAAELGIEYKDGDELHPQENIDKMASGRALDDDDR CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC AWWLVQVGKWLRGRPSGVIACSALKRSYRDLLRTKCPGTVFVHLHGDYDLLLSRMKARED EEEHEEHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH HFMPSTLLDSQFATLEPLEDDEDGKVFDVAHTISELAAQSAEWVRNK CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9135111; 9278503; 8655507; 11468405 [H]