Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is hisI
Identifier: 145296055
GI number: 145296055
Start: 2175590
End: 2175946
Strand: Reverse
Name: hisI
Synonym: cgR_1977
Alternate gene names: 145296055
Gene position: 2175946-2175590 (Counterclockwise)
Preceding gene: 145296056
Following gene: 145296054
Centisome position: 65.66
GC content: 56.3
Gene sequence:
>357_bases ATGAGTGACAATCCACAAGAGTATGAGCTGGATTGGGACGTCGAAAAGCGATTAAAGCTTAACGACGCCGGCCTGGTGCC GGCAATCGTCCAGGCCGACGGGACCAACGAGGTCCTCATGATGGCCTGGATGGATACCCACGCGCTAGCCTATACTTTGG CGACCCGCCGTGGAACCTATTTTTCTAGGTCCCGCAACGAGTACTGGATCAAGGGCCTGACCTCTGGAAACGTCCAAGAA GTCACCGGAGTTGCCCTCGACTGCGACGGCGACACCGTCCTTCTGACCGTGAAACAAACCGGCGGTGCGTGCCACACTGG TGCCCACACATGTTTCGACAATGACGTTTTGCTGTAA
Upstream 100 bases:
>100_bases GCGCCAACGCAGTGCTTGCCGCGACCATTTTCCACTTCCGCGAAGTAACCATCGCCGAAGTAAAGGGAGCCATTAAAGAT GCAGGATTTGAGGTGCGGAA
Downstream 100 bases:
>100_bases AAGCAACAACGATTAAGGGAGAAGTCTTATGAAGCCACGCGTGCTGTCAGCATTAGGCATTGGAGCTGGCGCCCTGGTTG TCTGGATCAGCTCACGCATG
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSDNPQEYELDWDVEKRLKLNDAGLVPAIVQADGTNEVLMMAWMDTHALAYTLATRRGTYFSRSRNEYWIKGLTSGNVQE VTGVALDCDGDTVLLTVKQTGGACHTGAHTCFDNDVLL
Sequences:
>Translated_118_residues MSDNPQEYELDWDVEKRLKLNDAGLVPAIVQADGTNEVLMMAWMDTHALAYTLATRRGTYFSRSRNEYWIKGLTSGNVQE VTGVALDCDGDTVLLTVKQTGGACHTGAHTCFDNDVLL >Mature_117_residues SDNPQEYELDWDVEKRLKLNDAGLVPAIVQADGTNEVLMMAWMDTHALAYTLATRRGTYFSRSRNEYWIKGLTSGNVQEV TGVALDCDGDTVLLTVKQTGGACHTGAHTCFDNDVLL
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=112, Percent_Identity=41.0714285714286, Blast_Score=92, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6319819, Length=90, Percent_Identity=38.8888888888889, Blast_Score=68, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS3_CORGB (A4QFF8)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001138876.1 - ProteinModelPortal: A4QFF8 - SMR: A4QFF8 - STRING: A4QFF8 - GeneID: 4994337 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_1977 - eggNOG: COG0139 - HOGENOM: HBG294308 - OMA: LWLKGES - ProtClustDB: PRK00051 - GO: GO:0005737 - HAMAP: MF_01021 - InterPro: IPR002496 - ProDom: PD002610
Pfam domain/function: PF01502 PRA-CH
EC number: =3.5.4.19
Molecular weight: Translated: 13027; Mature: 12896
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNPQEYELDWDVEKRLKLNDAGLVPAIVQADGTNEVLMMAWMDTHALAYTLATRRGTY CCCCCCCEEECCCCCCEEEECCCCCCEEEEECCCCCCEEEEEEECCCEEEEEEECCCCCE FSRSRNEYWIKGLTSGNVQEVTGVALDCDGDTVLLTVKQTGGACHTGAHTCFDNDVLL EECCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEEECCCCEECCCCCCCCCCCCCC >Mature Secondary Structure SDNPQEYELDWDVEKRLKLNDAGLVPAIVQADGTNEVLMMAWMDTHALAYTLATRRGTY CCCCCCEEECCCCCCEEEECCCCCCEEEEECCCCCCEEEEEEECCCEEEEEEECCCCCE FSRSRNEYWIKGLTSGNVQEVTGVALDCDGDTVLLTVKQTGGACHTGAHTCFDNDVLL EECCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEEECCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA