Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is cdsA [H]
Identifier: 145295925
GI number: 145295925
Start: 2055243
End: 2056136
Strand: Reverse
Name: cdsA [H]
Synonym: cgR_1850
Alternate gene names: 145295925
Gene position: 2056136-2055243 (Counterclockwise)
Preceding gene: 145295926
Following gene: 145295923
Centisome position: 62.04
GC content: 52.57
Gene sequence:
>894_bases ATGAATGAACCGGAGCAACATCACCGGTCCATGAGGATGCCCAAACCCAAAAATAATGCGGGTCGAGATCTCAAAGCTGC CATTGCTGTGGGTATCGGACTGGGGGTCCTGGTTCTTTTGGGGATTGTCCTAAGCCCATGGGGTTGGTACATCCTCGTTG CAGGTTTTATGGCTGCAGCAACATGGGAAGTTGGTAGCAGACTTAAAGAAGGCGGCTATCATTTGCCACTGCCGATTATG ATCATCGGCGGTCAGGCAATCATCTGGCTGTCATGGCCATTTGGCACGATGGGCATTTTGGCGTCTTTTGTGGCCACTGT GTTGGTGCTGATGTATTTCCGAATTTTCTACAATGGCACGGAAAAAGAAGCCCGCAACTATTTGAGGGACACCTCTGTGG GCATCTTCGTGCTCACCTGGATTCCATTGTTCGGAAGCTTCGCTGCGATGCTGTCGCTGATGCAAAACAATTCCATCCCG GGTACATACTTCATTTTGACGTTCATGCTGTGTGTGATCGCATCGGATGTGGGCGGGTATATCGCGGGTGTGTTCTTTGG ATCGCACCCAATGGCGCCGTTGGTGAGTCCGAAGAAGTCTTGGGAAGGCTTTGCCGGCTCCATTGTCTTAGGATCGGTCA CTGGTGCACTTAGTGTTCACTTCCTGCTCGATCACCACTGGTGGATGGGTGTGATCTTGGGTTGTGCCCTCGTTGTGTGC GCCACGTTGGGTGACTTGGTTGAGTCGCAGTTCAAACGCGATTTGGGCATCAAGGATATGTCGAACCTTCTTCCAGGCCA CGGCGGATTGATGGACCGTTTGGATGGCATGCTCCCGGCCGCGATGGTGACGTGGTTGATCCTGAGTGTGATCAGCAGCT CGTATCCGTCGTAA
Upstream 100 bases:
>100_bases AAACGACGCTTTCTTTTGCTTGCAAGAGTGTTTGGAAGAATTTTTTCGAAAATGCTGGCACCATCAACAGTGACATTGTT AGAAACTTCAAGGAGAACCC
Downstream 100 bases:
>100_bases AGCTTGGGCCAGCTTTAAGTTCAAAAAACTTGAAAGGCGCTGAGGTGCATAACGTGTGCTCCTCAGCGCCTTTTTGGCTG TCAAAGCTTAAAGGGCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MNEPEQHHRSMRMPKPKNNAGRDLKAAIAVGIGLGVLVLLGIVLSPWGWYILVAGFMAAATWEVGSRLKEGGYHLPLPIM IIGGQAIIWLSWPFGTMGILASFVATVLVLMYFRIFYNGTEKEARNYLRDTSVGIFVLTWIPLFGSFAAMLSLMQNNSIP GTYFILTFMLCVIASDVGGYIAGVFFGSHPMAPLVSPKKSWEGFAGSIVLGSVTGALSVHFLLDHHWWMGVILGCALVVC ATLGDLVESQFKRDLGIKDMSNLLPGHGGLMDRLDGMLPAAMVTWLILSVISSSYPS
Sequences:
>Translated_297_residues MNEPEQHHRSMRMPKPKNNAGRDLKAAIAVGIGLGVLVLLGIVLSPWGWYILVAGFMAAATWEVGSRLKEGGYHLPLPIM IIGGQAIIWLSWPFGTMGILASFVATVLVLMYFRIFYNGTEKEARNYLRDTSVGIFVLTWIPLFGSFAAMLSLMQNNSIP GTYFILTFMLCVIASDVGGYIAGVFFGSHPMAPLVSPKKSWEGFAGSIVLGSVTGALSVHFLLDHHWWMGVILGCALVVC ATLGDLVESQFKRDLGIKDMSNLLPGHGGLMDRLDGMLPAAMVTWLILSVISSSYPS >Mature_297_residues MNEPEQHHRSMRMPKPKNNAGRDLKAAIAVGIGLGVLVLLGIVLSPWGWYILVAGFMAAATWEVGSRLKEGGYHLPLPIM IIGGQAIIWLSWPFGTMGILASFVATVLVLMYFRIFYNGTEKEARNYLRDTSVGIFVLTWIPLFGSFAAMLSLMQNNSIP GTYFILTFMLCVIASDVGGYIAGVFFGSHPMAPLVSPKKSWEGFAGSIVLGSVTGALSVHFLLDHHWWMGVILGCALVVC ATLGDLVESQFKRDLGIKDMSNLLPGHGGLMDRLDGMLPAAMVTWLILSVISSSYPS
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=186, Percent_Identity=35.4838709677419, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787677, Length=110, Percent_Identity=33.6363636363636, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 32268; Mature: 32268
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPEQHHRSMRMPKPKNNAGRDLKAAIAVGIGLGVLVLLGIVLSPWGWYILVAGFMAAA CCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TWEVGSRLKEGGYHLPLPIMIIGGQAIIWLSWPFGTMGILASFVATVLVLMYFRIFYNGT HHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC EKEARNYLRDTSVGIFVLTWIPLFGSFAAMLSLMQNNSIPGTYFILTFMLCVIASDVGGY HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IAGVFFGSHPMAPLVSPKKSWEGFAGSIVLGSVTGALSVHFLLDHHWWMGVILGCALVVC HHHHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLGDLVESQFKRDLGIKDMSNLLPGHGGLMDRLDGMLPAAMVTWLILSVISSSYPS HHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNEPEQHHRSMRMPKPKNNAGRDLKAAIAVGIGLGVLVLLGIVLSPWGWYILVAGFMAAA CCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TWEVGSRLKEGGYHLPLPIMIIGGQAIIWLSWPFGTMGILASFVATVLVLMYFRIFYNGT HHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC EKEARNYLRDTSVGIFVLTWIPLFGSFAAMLSLMQNNSIPGTYFILTFMLCVIASDVGGY HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IAGVFFGSHPMAPLVSPKKSWEGFAGSIVLGSVTGALSVHFLLDHHWWMGVILGCALVVC HHHHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLGDLVESQFKRDLGIKDMSNLLPGHGGLMDRLDGMLPAAMVTWLILSVISSSYPS HHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]