Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145295843
Identifier: 145295843
GI number: 145295843
Start: 1965782
End: 1966366
Strand: Reverse
Name: 145295843
Synonym: cgR_1768
Alternate gene names: NA
Gene position: 1966366-1965782 (Counterclockwise)
Preceding gene: 145295844
Following gene: 145295838
Centisome position: 59.33
GC content: 56.75
Gene sequence:
>585_bases TTGGCCCGCACGGTTTCCGCGTGCGGGACGTGTTCATTTCTGTATAGGAAAACTACCTTGATCGTTGATACCCAGTTTGA GAAGATCCCTGCTCACGACGTCGTGGGCATCCGGGTAATCCTTTCCTCTGAGGATCTCCCTGAGCTCTTTAAACGCGGCT ACGCGGAAGTAAAGAAATTCCTCCGCCTAGAAGGCATCGAACCTAAAGGTTCTGCCCGCGCCTACTACTTTGGCGATGTC TCTGACACCGTAGACATCCTGATTGGTTTCCCCGTCAGCCCCGCGCAAGCAGAATCCCTGCGCCGCGGCGCGCTGAGCCA ATCCGGTGGCGACATCGATGACGTTGTCCTCCACCACTTCCGCGACATGAAAACCATGCACAGCCGACACTCCGGCCCCT TCGATGGAGTCGAGCGCGTCTGGGACGAAATCCTCGATGAAGTCGAGGACCTCGGATGCACTCTGCCATCCAGCAGCATC GGTTGGGAAGAATACATCGAAGGCCCAGCCACCGCTGATGCCTGCGACCAACTGGCCACTGAAGTTTATGTTCAGGTGTG CCAAGCACCGGTGAAGACTGCCTAA
Upstream 100 bases:
>100_bases TGTAGGCATCATTGTGCTGTACCCAATCATGAAGCGCCTGTACCTTTCCATTGGGGAAGGCAAGAACGCAAAGTTCTAGT ACGCTGCTAAAGTATGCAGC
Downstream 100 bases:
>100_bases ATATTCACCCGGAATTTCCCTCTCCCTACGCTTTGATCCGCGATGGGGTAGGGGATTTTTCTTATTTGGGGGAGTGGGTG GGTCCTTTTTTGGAGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MARTVSACGTCSFLYRKTTLIVDTQFEKIPAHDVVGIRVILSSEDLPELFKRGYAEVKKFLRLEGIEPKGSARAYYFGDV SDTVDILIGFPVSPAQAESLRRGALSQSGGDIDDVVLHHFRDMKTMHSRHSGPFDGVERVWDEILDEVEDLGCTLPSSSI GWEEYIEGPATADACDQLATEVYVQVCQAPVKTA
Sequences:
>Translated_194_residues MARTVSACGTCSFLYRKTTLIVDTQFEKIPAHDVVGIRVILSSEDLPELFKRGYAEVKKFLRLEGIEPKGSARAYYFGDV SDTVDILIGFPVSPAQAESLRRGALSQSGGDIDDVVLHHFRDMKTMHSRHSGPFDGVERVWDEILDEVEDLGCTLPSSSI GWEEYIEGPATADACDQLATEVYVQVCQAPVKTA >Mature_193_residues ARTVSACGTCSFLYRKTTLIVDTQFEKIPAHDVVGIRVILSSEDLPELFKRGYAEVKKFLRLEGIEPKGSARAYYFGDVS DTVDILIGFPVSPAQAESLRRGALSQSGGDIDDVVLHHFRDMKTMHSRHSGPFDGVERVWDEILDEVEDLGCTLPSSSIG WEEYIEGPATADACDQLATEVYVQVCQAPVKTA
Specific function: Unknown
COG id: COG4978
COG function: function code KT; Transcriptional regulator, effector-binding domain/component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21373; Mature: 21242
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTVSACGTCSFLYRKTTLIVDTQFEKIPAHDVVGIRVILSSEDLPELFKRGYAEVKKF CCCCCCHHHHHHHHHHHHEEEEECCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH LRLEGIEPKGSARAYYFGDVSDTVDILIGFPVSPAQAESLRRGALSQSGGDIDDVVLHHF HHHCCCCCCCCCCEEEECCCCCHHHHEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH RDMKTMHSRHSGPFDGVERVWDEILDEVEDLGCTLPSSSIGWEEYIEGPATADACDQLAT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHH EVYVQVCQAPVKTA HHHHHHHHHCCCCC >Mature Secondary Structure ARTVSACGTCSFLYRKTTLIVDTQFEKIPAHDVVGIRVILSSEDLPELFKRGYAEVKKF CCCCCHHHHHHHHHHHHEEEEECCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH LRLEGIEPKGSARAYYFGDVSDTVDILIGFPVSPAQAESLRRGALSQSGGDIDDVVLHHF HHHCCCCCCCCCCEEEECCCCCHHHHEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH RDMKTMHSRHSGPFDGVERVWDEILDEVEDLGCTLPSSSIGWEEYIEGPATADACDQLAT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHH EVYVQVCQAPVKTA HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA