Definition Corynebacterium glutamicum R chromosome, complete genome.
Accession NC_009342
Length 3,314,179

Click here to switch to the map view.

The map label for this gene is ytoQ [H]

Identifier: 145294588

GI number: 145294588

Start: 599297

End: 599968

Strand: Direct

Name: ytoQ [H]

Synonym: cgR_0539

Alternate gene names: 145294588

Gene position: 599297-599968 (Clockwise)

Preceding gene: 145294584

Following gene: 145294591

Centisome position: 18.08

GC content: 67.71

Gene sequence:

>672_bases
GTGGCCTTGAGCTTCAACGTTTACCTGTCCGGCGAGATCCACACCGACTGGCGAGAAGAGATCCAGCGCGGCGCGGAGGC
CGCCGGGCTCGACGTCGTCTTCACCGCGCCGGTGACCGATCACCCTGCCAGCGACGCCGCCGGCGACCACCTGGGTGAGG
CACCCGCGGGCTTTTGGCGCGATCACCAGTCCTCGAAGGTCAACTCCATCCGCACCCGCTCCCTGATCGAGAAGGCCGAC
ATGGTCGTCGTCCGCTTCGGGGATCAGTACAAGCAGTGGAACGCCGCCTTCGACGCGGGTTACTGTGCGGCACTGGACAA
GCCTTATGCCACGCTGCATGGCGAGGACATCGTCCACCCGCTCAAGGAAGTCGACGCCGCCGCGCAGGCGGGGTGCACCA
CCACCGACCAGGTCGTCGAGATCCTGCGTTACATGCTCGAAGCCGAAGAAGCACTCCTCAGCTGCGCTAGCCCTCTAAGC
AGGCAGGCGCAGCGTCACGGCGAGCCCACCTTGAGCCCGCGGCCTGAGTTCCACCGAACCGCCGTGGGCTTTCGCAATTG
CATCGACGATCGCCAGCCCCAGGCCTTGGCCTGCCCCCGCGGTCCGCTGCGCCCGTGCGAAGGGCTCCACCCACGTGCGG
ACCTCCGCCGCGTCCAGCTGCGGCCCACCTGA

Upstream 100 bases:

>100_bases
CCTACCTGACAACGGAGGGTAATACCATTGGCGAGATCGAGCAGATTTCCCTCACACATCCGCGTAAACTCCAAGGTCAA
TGCCCAAAAATTAAGGAGAA

Downstream 100 bases:

>100_bases
CTCTACGGTGATCTCTGCGTTCCGACCCGCCTGTGCCACCGTCACGGACGGATCTTCGCCGTGGGTGAGCCCGTTGCACA
CCATGTTCTCCACTGCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MALSFNVYLSGEIHTDWREEIQRGAEAAGLDVVFTAPVTDHPASDAAGDHLGEAPAGFWRDHQSSKVNSIRTRSLIEKAD
MVVVRFGDQYKQWNAAFDAGYCAALDKPYATLHGEDIVHPLKEVDAAAQAGCTTTDQVVEILRYMLEAEEALLSCASPLS
RQAQRHGEPTLSPRPEFHRTAVGFRNCIDDRQPQALACPRGPLRPCEGLHPRADLRRVQLRPT

Sequences:

>Translated_223_residues
MALSFNVYLSGEIHTDWREEIQRGAEAAGLDVVFTAPVTDHPASDAAGDHLGEAPAGFWRDHQSSKVNSIRTRSLIEKAD
MVVVRFGDQYKQWNAAFDAGYCAALDKPYATLHGEDIVHPLKEVDAAAQAGCTTTDQVVEILRYMLEAEEALLSCASPLS
RQAQRHGEPTLSPRPEFHRTAVGFRNCIDDRQPQALACPRGPLRPCEGLHPRADLRRVQLRPT
>Mature_222_residues
ALSFNVYLSGEIHTDWREEIQRGAEAAGLDVVFTAPVTDHPASDAAGDHLGEAPAGFWRDHQSSKVNSIRTRSLIEKADM
VVVRFGDQYKQWNAAFDAGYCAALDKPYATLHGEDIVHPLKEVDAAAQAGCTTTDQVVEILRYMLEAEEALLSCASPLSR
QAQRHGEPTLSPRPEFHRTAVGFRNCIDDRQPQALACPRGPLRPCEGLHPRADLRRVQLRPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019884 [H]

Pfam domain/function: PF11071 DUF2872 [H]

EC number: NA

Molecular weight: Translated: 24639; Mature: 24508

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSFNVYLSGEIHTDWREEIQRGAEAAGLDVVFTAPVTDHPASDAAGDHLGEAPAGFWR
CEEEEEEEEECCCCCHHHHHHHHCCHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
DHQSSKVNSIRTRSLIEKADMVVVRFGDQYKQWNAAFDAGYCAALDKPYATLHGEDIVHP
CCCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHCCCHHHHCCCCHHHHCCHHHHHH
LKEVDAAAQAGCTTTDQVVEILRYMLEAEEALLSCASPLSRQAQRHGEPTLSPRPEFHRT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
AVGFRNCIDDRQPQALACPRGPLRPCEGLHPRADLRRVQLRPT
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHEEECCCC
>Mature Secondary Structure 
ALSFNVYLSGEIHTDWREEIQRGAEAAGLDVVFTAPVTDHPASDAAGDHLGEAPAGFWR
EEEEEEEEECCCCCHHHHHHHHCCHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
DHQSSKVNSIRTRSLIEKADMVVVRFGDQYKQWNAAFDAGYCAALDKPYATLHGEDIVHP
CCCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHCCCHHHHCCCCHHHHCCHHHHHH
LKEVDAAAQAGCTTTDQVVEILRYMLEAEEALLSCASPLSRQAQRHGEPTLSPRPEFHRT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
AVGFRNCIDDRQPQALACPRGPLRPCEGLHPRADLRRVQLRPT
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]