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The map label for this gene is ccsB [H]

Identifier: 145294560

GI number: 145294560

Start: 571238

End: 572863

Strand: Direct

Name: ccsB [H]

Synonym: cgR_0511

Alternate gene names: 145294560

Gene position: 571238-572863 (Clockwise)

Preceding gene: 145294559

Following gene: 145294561

Centisome position: 17.24

GC content: 57.87

Gene sequence:

>1626_bases
ATGCTCAAAACAGTCAAGCTGTATGCACGGAAAGCGTGGAACTGGCTCACCAGCATGCGCACAGCACTGGCGTTGCTGTT
TCTTCTGGCGATCGCTGCCATCCCTGGCGCATTGCTCCCGCAGCGTTCCCTCAATGAATCAAACGTCATTGAATACATTG
AGAACAATGGAAAGCTCGCTGAGTTCTACGACAAGATTCAGCTTTTCGACGTCTTCTCCTCCACGTGGTTTACCGCCATC
TATGTGCTGCTCCTGATCTCTTTGGTCGGCTGTATTCTCCCTCGAAGCTGGGAACACTACAAAGCCATGCGCGCACCTGT
CGTGCGGGCGCCAAGGAACCTCGCACGTTTGGCTCACAACGGCGAGGGGCTCGTCGAAAAGCGTGAAGAAGAGGTAGAAA
AAGACGCCCGTAAACTCCTCAAAGGCTGGAAAATCACCGAATATTCCGCCGAGGAAGACCGCGCGGGAGTGCGCTCCATT
GCCGCTGAAAAGGGCTACACGCGGGAACTTTTCAACCTGATTTTCCACCTGGGCATCGTGGGCATGATTGTGACCGCAGG
CCTGGGACGACTGTTTTACTACGAAGGCCACGTCATCGTCGTGACCGACGGCGAGCAAAACCAACAGAACTCCGTGTTCT
GCAACACTGCCACCGCCAACTACGACTCCTTCCGCGCCGGCGCCAACTTCGACGGCACCGGACTGACCACCTTCTGCTTT
GAAGCGCACGATTTCTCCGCCGACTACCTCGCCAACGGCCAGGCCGAGATGTTCCGCTCGAATATTTCCTACGCAGTCGG
CGACGACATCCAAAACGACCCAGAAACCTGGGAAGACTACGAACTTCGCGTCAACCACCCACTGCGCATCGAAGGCGACC
GCGTCTACCTTCAGGGCCACGGCTTCGCCCCAACATTCACCGTGACCTGGCCAAATGGCGAGACCCGCACCCAGACCGTG
CAGTGGCGCCCAGACGACCCGACCTTCTTCCTGTCCTCAGGCGTGGTCCGTTTCGATCCACCCGCCGGCATGTACCCAGA
CCTTTACGAGCGCCGCCAAAACCAGTTGGCCATCCAGGGACTTTTCGCACCGACCGCGGAATGGGAAGGCGACAACAACG
AACTGCTGACCTCCTCCTACCCGGCGATGCGTGACCCAGCCGTGGCGATCGATATTTACCGTGGCGACAACGGCCTGGAC
ACCGGCATCGGACAATCCCTGTTCAGCCTGGACTCCACCCTCATGCACAGTGGCGTGCTGCAAAAAATTGAGCGCGTCAA
CCTCCAAATTGGCGACACGGTCACCCTGGATGATGGCACCACCGTCTCCTTCGACGGCGCTTCAGAATTTGCTAACTACC
AGATCAGCCGCGACCCCACACAAAACTGGGTGCTGGTCACCACCGTGATTTCGCTGGTCTCCCTGGTTGGATCCCTGATG
ATCCGACGCCGCCGCATTTGGGTGCGTTTCTATCCACAAGAAAACGGAACCACCCGCGTGGAAACTGGCGGACTTGCCCG
CACCGACCGCGCAGGCTGGGGTGGCGAATACGAGAAATTCCACCGCGAACTGCTGGGTCTGAAGGAGGAAGATGAAGACG
AAGAGTACTTCGACCACGACGACTAA

Upstream 100 bases:

>100_bases
ATGGGCAATTTTTATCAACTGGGTCCGTCAGTGGACCGTTGAATACGGCGCAACACTGCTCTAGAAAAAGACTTTTAGTA
GGAAGAGAATCGGCACGACA

Downstream 100 bases:

>100_bases
CACCGCAGTTTAAAGACCCTACATCGAAGCAATTCTCACAAGAATAAGGTTGGAAAATTATGTTGCCCGTCAACCAAACG
TATGCGCAGTTCTCAGACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MLKTVKLYARKAWNWLTSMRTALALLFLLAIAAIPGALLPQRSLNESNVIEYIENNGKLAEFYDKIQLFDVFSSTWFTAI
YVLLLISLVGCILPRSWEHYKAMRAPVVRAPRNLARLAHNGEGLVEKREEEVEKDARKLLKGWKITEYSAEEDRAGVRSI
AAEKGYTRELFNLIFHLGIVGMIVTAGLGRLFYYEGHVIVVTDGEQNQQNSVFCNTATANYDSFRAGANFDGTGLTTFCF
EAHDFSADYLANGQAEMFRSNISYAVGDDIQNDPETWEDYELRVNHPLRIEGDRVYLQGHGFAPTFTVTWPNGETRTQTV
QWRPDDPTFFLSSGVVRFDPPAGMYPDLYERRQNQLAIQGLFAPTAEWEGDNNELLTSSYPAMRDPAVAIDIYRGDNGLD
TGIGQSLFSLDSTLMHSGVLQKIERVNLQIGDTVTLDDGTTVSFDGASEFANYQISRDPTQNWVLVTTVISLVSLVGSLM
IRRRRIWVRFYPQENGTTRVETGGLARTDRAGWGGEYEKFHRELLGLKEEDEDEEYFDHDD

Sequences:

>Translated_541_residues
MLKTVKLYARKAWNWLTSMRTALALLFLLAIAAIPGALLPQRSLNESNVIEYIENNGKLAEFYDKIQLFDVFSSTWFTAI
YVLLLISLVGCILPRSWEHYKAMRAPVVRAPRNLARLAHNGEGLVEKREEEVEKDARKLLKGWKITEYSAEEDRAGVRSI
AAEKGYTRELFNLIFHLGIVGMIVTAGLGRLFYYEGHVIVVTDGEQNQQNSVFCNTATANYDSFRAGANFDGTGLTTFCF
EAHDFSADYLANGQAEMFRSNISYAVGDDIQNDPETWEDYELRVNHPLRIEGDRVYLQGHGFAPTFTVTWPNGETRTQTV
QWRPDDPTFFLSSGVVRFDPPAGMYPDLYERRQNQLAIQGLFAPTAEWEGDNNELLTSSYPAMRDPAVAIDIYRGDNGLD
TGIGQSLFSLDSTLMHSGVLQKIERVNLQIGDTVTLDDGTTVSFDGASEFANYQISRDPTQNWVLVTTVISLVSLVGSLM
IRRRRIWVRFYPQENGTTRVETGGLARTDRAGWGGEYEKFHRELLGLKEEDEDEEYFDHDD
>Mature_541_residues
MLKTVKLYARKAWNWLTSMRTALALLFLLAIAAIPGALLPQRSLNESNVIEYIENNGKLAEFYDKIQLFDVFSSTWFTAI
YVLLLISLVGCILPRSWEHYKAMRAPVVRAPRNLARLAHNGEGLVEKREEEVEKDARKLLKGWKITEYSAEEDRAGVRSI
AAEKGYTRELFNLIFHLGIVGMIVTAGLGRLFYYEGHVIVVTDGEQNQQNSVFCNTATANYDSFRAGANFDGTGLTTFCF
EAHDFSADYLANGQAEMFRSNISYAVGDDIQNDPETWEDYELRVNHPLRIEGDRVYLQGHGFAPTFTVTWPNGETRTQTV
QWRPDDPTFFLSSGVVRFDPPAGMYPDLYERRQNQLAIQGLFAPTAEWEGDNNELLTSSYPAMRDPAVAIDIYRGDNGLD
TGIGQSLFSLDSTLMHSGVLQKIERVNLQIGDTVTLDDGTTVSFDGASEFANYQISRDPTQNWVLVTTVISLVSLVGSLM
IRRRRIWVRFYPQENGTTRVETGGLARTDRAGWGGEYEKFHRELLGLKEEDEDEEYFDHDD

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 61201; Mature: 61201

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTVKLYARKAWNWLTSMRTALALLFLLAIAAIPGALLPQRSLNESNVIEYIENNGKLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHH
EFYDKIQLFDVFSSTWFTAIYVLLLISLVGCILPRSWEHYKAMRAPVVRAPRNLARLAHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCHHHHHHHCC
GEGLVEKREEEVEKDARKLLKGWKITEYSAEEDRAGVRSIAAEKGYTRELFNLIFHLGIV
CCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GMIVTAGLGRLFYYEGHVIVVTDGEQNQQNSVFCNTATANYDSFRAGANFDGTGLTTFCF
HHHHHHCCCCEEEEECEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEE
EAHDFSADYLANGQAEMFRSNISYAVGDDIQNDPETWEDYELRVNHPLRIEGDRVYLQGH
ECCCCCHHHHCCCHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCEEEECCEEEEEEC
GFAPTFTVTWPNGETRTQTVQWRPDDPTFFLSSGVVRFDPPAGMYPDLYERRQNQLAIQG
CCCCEEEEECCCCCCCCEEEEECCCCCCEEECCCEEEECCCCCCCCHHHHHHHHCEEEEE
LFAPTAEWEGDNNELLTSSYPAMRDPAVAIDIYRGDNGLDTGIGQSLFSLDSTLMHSGVL
EECCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
QKIERVNLQIGDTVTLDDGTTVSFDGASEFANYQISRDPTQNWVLVTTVISLVSLVGSLM
HHHHHCCEEECCEEEECCCCEEEECCHHHHHCEEECCCCCCCEEHHHHHHHHHHHHHHHH
IRRRRIWVRFYPQENGTTRVETGGLARTDRAGWGGEYEKFHRELLGLKEEDEDEEYFDHD
HHHEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
D
C
>Mature Secondary Structure
MLKTVKLYARKAWNWLTSMRTALALLFLLAIAAIPGALLPQRSLNESNVIEYIENNGKLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHH
EFYDKIQLFDVFSSTWFTAIYVLLLISLVGCILPRSWEHYKAMRAPVVRAPRNLARLAHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCHHHHHHHCC
GEGLVEKREEEVEKDARKLLKGWKITEYSAEEDRAGVRSIAAEKGYTRELFNLIFHLGIV
CCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GMIVTAGLGRLFYYEGHVIVVTDGEQNQQNSVFCNTATANYDSFRAGANFDGTGLTTFCF
HHHHHHCCCCEEEEECEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEE
EAHDFSADYLANGQAEMFRSNISYAVGDDIQNDPETWEDYELRVNHPLRIEGDRVYLQGH
ECCCCCHHHHCCCHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCEEEECCEEEEEEC
GFAPTFTVTWPNGETRTQTVQWRPDDPTFFLSSGVVRFDPPAGMYPDLYERRQNQLAIQG
CCCCEEEEECCCCCCCCEEEEECCCCCCEEECCCEEEECCCCCCCCHHHHHHHHCEEEEE
LFAPTAEWEGDNNELLTSSYPAMRDPAVAIDIYRGDNGLDTGIGQSLFSLDSTLMHSGVL
EECCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
QKIERVNLQIGDTVTLDDGTTVSFDGASEFANYQISRDPTQNWVLVTTVISLVSLVGSLM
HHHHHCCEEECCEEEECCCCEEEECCHHHHHCEEECCCCCCCEEHHHHHHHHHHHHHHHH
IRRRRIWVRFYPQENGTTRVETGGLARTDRAGWGGEYEKFHRELLGLKEEDEDEEYFDHD
HHHEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA