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The map label for this gene is ybaB [C]

Identifier: 145294360

GI number: 145294360

Start: 344900

End: 345211

Strand: Direct

Name: ybaB [C]

Synonym: cgR_0315

Alternate gene names: 145294360

Gene position: 344900-345211 (Clockwise)

Preceding gene: 145294359

Following gene: 145294361

Centisome position: 10.41

GC content: 57.05

Gene sequence:

>312_bases
ATGACCCAGCCAGATATGTCCCAGATCCTCGCCCAAGCTCAGCAGATGCAGGCTCAACTACAGGCCGCTCAGCAGGAAAT
CCTGGCAACCACCGTTGTCGGAAATGCAGGAAACGGGCTGGTTACCGTCACTATGGCCGGCAACGGCGAGGTCTCCGCAG
TGACCGTTGACCCAAAGGTCGTTGACCCTGAAGATGTCGAAACCCTACAGGACCTTCTGCTCGGCGCATTCAAGGATGCA
CACAACAAGGTCGCAAACGTTGCTGAAGAGAAGATGGGCCCACTGTCCCAGGGCATGGGTGGCCTCTTCTAA

Upstream 100 bases:

>100_bases
TGTAAGCCGAGAGCGAACCTGCCAAAAGTAAGGGGCGGGTTCGCGGTGACGTCGGTAGGATCGAGCGAAGAAACCAACAA
ACTTCTTAGGAGCCATTCTC

Downstream 100 bases:

>100_bases
TTAGTTGCTAAACGCAGGGCCGGGTTCTCGATGAACCCGGCTTTTGTCATGTATGCGATACTGTTCCTTGTCCAATTTTT
AGTCCAGATAGGTAGTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTQPDMSQILAQAQQMQAQLQAAQQEILATTVVGNAGNGLVTVTMAGNGEVSAVTVDPKVVDPEDVETLQDLLLGAFKDA
HNKVANVAEEKMGPLSQGMGGLF

Sequences:

>Translated_103_residues
MTQPDMSQILAQAQQMQAQLQAAQQEILATTVVGNAGNGLVTVTMAGNGEVSAVTVDPKVVDPEDVETLQDLLLGAFKDA
HNKVANVAEEKMGPLSQGMGGLF
>Mature_102_residues
TQPDMSQILAQAQQMQAQLQAAQQEILATTVVGNAGNGLVTVTMAGNGEVSAVTVDPKVVDPEDVETLQDLLLGAFKDAH
NKVANVAEEKMGPLSQGMGGLF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=94, Percent_Identity=39.3617021276596, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y243_CORGL (Q8NTQ9)

Other databases:

- EMBL:   BA000036
- EMBL:   BX927148
- RefSeq:   NP_599496.1
- RefSeq:   YP_224543.1
- ProteinModelPortal:   Q8NTQ9
- SMR:   Q8NTQ9
- GeneID:   1021132
- GeneID:   3342561
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg0297
- KEGG:   cgl:NCgl0240
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- ProtClustDB:   PRK00153
- BioCyc:   CGLU196627:CG0297-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 10722; Mature: 10591

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPDMSQILAQAQQMQAQLQAAQQEILATTVVGNAGNGLVTVTMAGNGEVSAVTVDPKV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCC
VDPEDVETLQDLLLGAFKDAHNKVANVAEEKMGPLSQGMGGLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure 
TQPDMSQILAQAQQMQAQLQAAQQEILATTVVGNAGNGLVTVTMAGNGEVSAVTVDPKV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCC
VDPEDVETLQDLLLGAFKDAHNKVANVAEEKMGPLSQGMGGLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626