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The map label for this gene is recR

Identifier: 145294361

GI number: 145294361

Start: 345315

End: 345971

Strand: Direct

Name: recR

Synonym: cgR_0316

Alternate gene names: 145294361

Gene position: 345315-345971 (Clockwise)

Preceding gene: 145294360

Following gene: 145294362

Centisome position: 10.42

GC content: 60.73

Gene sequence:

>657_bases
GTGTTTGAAGGCCCACTCCAGGATCTCATCGACGAACTTTCTCGTCTCCCCGGCGTCGGCCCCAAAAGCGCCCAACGCAT
CGCATTTCACCTGCTCAACGTAGATCCTACCGATATCACCCGCCTTCAGGAAGCCCTCGGAGGCGTGCGTGATGGCGTCC
AATTCTGCCGCATCTGCTGCAATATTTCCCGCGAAGAAGTCTGCCGCATCTGCTCCGATTCTGGACGCGACGGCGGAACA
ATCTGTGTCGTCGAAGAACCAAAAGACATCCAAGTTATCGAGCGCACCGGCGAATTCTCCGGCCGCTACCACGTCCTCGG
CGGCGCCCTCGACCCGCTGGCCAACATCGGCCCCCGCGAACTCAACATTTCCACGCTCCTGCAGCGCATCGGCGGCGTCC
TGCCAGACCGCGAGCTCGCGGATTCCACTCCTGAAAATAAGCTTTTCGACGCCACCCCCACCGTCCGCGAAGTCATCCTC
GCAACGGACCCCAACACCGAAGGCGAAGCCACCGCCTCATACCTCGGCCGCCTCCTCAAAGACTTCCCAGATCTCGTAGT
TTCCCGCCTCGCATCCGGAATGCCACTAGGCGGCGACCTCGAATTCGTCGACGAACTCACTCTCTCCCGAGCATTGAGTG
GCCGCCTGCAGATCTAG

Upstream 100 bases:

>100_bases
GTTGCTAAACGCAGGGCCGGGTTCTCGATGAACCCGGCTTTTGTCATGTATGCGATACTGTTCCTTGTCCAATTTTTAGT
CCAGATAGGTAGTGTAAGAC

Downstream 100 bases:

>100_bases
TTTTTCTGGTTTGCTGGGGGTGTTTCGCTGTTTCGCGGGTGTGCGAAAGTGGGCGGGTTTCTGCCTGGAACGGTCGGTTT
GGTGAGGGAAGTTTGCCTAG

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPTDITRLQEALGGVRDGVQFCRICCNISREEVCRICSDSGRDGGT
ICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRELNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVIL
ATDPNTEGEATASYLGRLLKDFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLQI

Sequences:

>Translated_218_residues
MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPTDITRLQEALGGVRDGVQFCRICCNISREEVCRICSDSGRDGGT
ICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRELNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVIL
ATDPNTEGEATASYLGRLLKDFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLQI
>Mature_218_residues
MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPTDITRLQEALGGVRDGVQFCRICCNISREEVCRICSDSGRDGGT
ICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRELNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVIL
ATDPNTEGEATASYLGRLLKDFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLQI

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=214, Percent_Identity=45.3271028037383, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_CORGB (A4QAN3)

Other databases:

- EMBL:   AP009044
- RefSeq:   YP_001137182.1
- ProteinModelPortal:   A4QAN3
- SMR:   A4QAN3
- STRING:   A4QAN3
- GeneID:   4992273
- GenomeReviews:   AP009044_GR
- KEGG:   cgt:cgR_0316
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 23656; Mature: 23656

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPTDITRLQEALGGVRDGVQFCRICC
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NISREEVCRICSDSGRDGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRE
CCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCCCCEEECCCCHHHHHCCCCCC
LNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLK
CCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHH
DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLQI
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPTDITRLQEALGGVRDGVQFCRICC
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NISREEVCRICSDSGRDGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRE
CCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCCCCEEECCCCHHHHHCCCCCC
LNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLK
CCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHH
DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLQI
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA