Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is abgT [H]
Identifier: 145294219
GI number: 145294219
Start: 194153
End: 195769
Strand: Direct
Name: abgT [H]
Synonym: cgR_0175
Alternate gene names: 145294219
Gene position: 194153-195769 (Clockwise)
Preceding gene: 145294218
Following gene: 145294220
Centisome position: 5.86
GC content: 52.81
Gene sequence:
>1617_bases ATGAGCTCAACAACCTCAAAAACCTCAGAAAGACAACAGCCAGACGCACCGACGAGCAAGCTCGGTAAATGGAGCGATAA ATTTCTCAATGGTGTGGAAACGCTTGGAAACAAGCTGCCCACACCATTTACGCTTTTCTTGATACTTTTCCTGATCACGG CGCTGGCCTCATCGATCATGGCGTGGATGAACGTGTCCGTGATTGTGCCGGGTTCGGATGAAGAACTTTTTGTTAAAGGC CTGTTCACCGGTGAAGGCCTAACCTGGTTGACTACGAATCTCGGGGCAAACTACATCGGGTTCCCGCCGTTGCTCACCGT GTTGCCAATTCTGTTGGCAGTGGGTGTTGCTGAACGTTCCGGCATGTTGGCTGCGCTGATTAGGAAACTTTTTGGTTCGG CGAAAAAGATCGTGCTGCCTTATGCCGTTGGTGTGATTGGTGTGACGGCGTCGATCATGGCGGACGCTGCCTTCGTGGTG GTGCCACCTTTGGCCGCGATGGTGTTTAAAGCTGCTGGTCGGCACCCTGTGGCTGGGCTATTGGGTTCGTTTGCAGCTGT GGGTGCAGGATATTCCACAGCGATTGTGCCCACCAGCCTTGATGCACTTTTTGCTGGAATCACAAACGCAGTGATGGAGA CTCTGCCGGGAATCGCCACAACTGAAGTGAATCCGGTGTCGAACTATTACTTCAACATTGCATCCTCGATTGTGCTGGGT CTGCTGTGTGGTTTCCTCATCGATAAGGTTCTGGAACCCCGCATGTGGCGTCAGGATATCGCCACCGAATACGCGGAGAG CGTTGAACCGATAAGCGGCACCGGTGATGAGGAAATCTCGGCAACGTTGACGGTTCAGGAAAACCGCGCACTGGCGATCT CCATGTGGACCACCCTGGTTACGGCCATCGTTGTGCTGGTAGTTGTGCTGATTCCTGGATCCCCATGGCGAAATGAAGAC GGCGGATTCCTCCCAACTTCGCCACTGCTGAGCTCTGTGGTGTTCATCGTGTTCTTGTTCTTCATGGTGATGGGTCTGGC CTACGGCATGGTGGTGGGCACGATCAAGAACATGGATGATGTCGTGAACATGATGGGCGAAGCAATCAAGGACATGATTG GTTTCTTGGTTTTGGCCTTCATTTTGGGACAGTTTGTGGCGCTGTTTAACTGGACGGGCATCGGTACCTGGACTGCTGTT CAGGGTGCTGCGGGATTGGAAGCGATCGGGCTTACCGGATTCCCTGCGATCATTGCATTTATTATTTTGGCGTCATGCTT GAACCTGCTGATTATTTCCGGCTCTGCGATGTGGACGCTGATGGCTGCGGTGTTCGTCCCGATGTTCGCTCTGCTTGGCT ATGAACCATCATTCATTCAGGCAGCATTCCGCGTGGGTGACTCGGCAACTCAGGTGATCACACCGCTGAATCCGTACATG ATTGTGATCCTCGGTTTGCTGCGTCGATACGAACCGGATGCAGGTTTAGGCACCTTGATGTCAAGGCTTATCCCATTTGT GATCCCTTTCTGGCTAGCCTGGGCTACATTGTTGGCAATTTGGTTCTACGCCGATTTGCCGCTTGGACCTGGCTCTGCGA TCTTCCTCGAAGGATAA
Upstream 100 bases:
>100_bases TGCCTTATTTGCCGATATTTATTCGGTGAGTTACTTAGTCTGGCTGGCATCGCCGGAAAACCGAACCGAGGTTTTCCGCA TGACTGCAAAGGTCTGAGAA
Downstream 100 bases:
>100_bases GTTTTCATGAGTACTGACAATTTTTCTCCACAAGTTCCGTCGACTGTGTATTTGGATTACATGGAGCAAGGGATTGCCGC GCGTAAAGCGGAGGCAGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MSSTTSKTSERQQPDAPTSKLGKWSDKFLNGVETLGNKLPTPFTLFLILFLITALASSIMAWMNVSVIVPGSDEELFVKG LFTGEGLTWLTTNLGANYIGFPPLLTVLPILLAVGVAERSGMLAALIRKLFGSAKKIVLPYAVGVIGVTASIMADAAFVV VPPLAAMVFKAAGRHPVAGLLGSFAAVGAGYSTAIVPTSLDALFAGITNAVMETLPGIATTEVNPVSNYYFNIASSIVLG LLCGFLIDKVLEPRMWRQDIATEYAESVEPISGTGDEEISATLTVQENRALAISMWTTLVTAIVVLVVVLIPGSPWRNED GGFLPTSPLLSSVVFIVFLFFMVMGLAYGMVVGTIKNMDDVVNMMGEAIKDMIGFLVLAFILGQFVALFNWTGIGTWTAV QGAAGLEAIGLTGFPAIIAFIILASCLNLLIISGSAMWTLMAAVFVPMFALLGYEPSFIQAAFRVGDSATQVITPLNPYM IVILGLLRRYEPDAGLGTLMSRLIPFVIPFWLAWATLLAIWFYADLPLGPGSAIFLEG
Sequences:
>Translated_538_residues MSSTTSKTSERQQPDAPTSKLGKWSDKFLNGVETLGNKLPTPFTLFLILFLITALASSIMAWMNVSVIVPGSDEELFVKG LFTGEGLTWLTTNLGANYIGFPPLLTVLPILLAVGVAERSGMLAALIRKLFGSAKKIVLPYAVGVIGVTASIMADAAFVV VPPLAAMVFKAAGRHPVAGLLGSFAAVGAGYSTAIVPTSLDALFAGITNAVMETLPGIATTEVNPVSNYYFNIASSIVLG LLCGFLIDKVLEPRMWRQDIATEYAESVEPISGTGDEEISATLTVQENRALAISMWTTLVTAIVVLVVVLIPGSPWRNED GGFLPTSPLLSSVVFIVFLFFMVMGLAYGMVVGTIKNMDDVVNMMGEAIKDMIGFLVLAFILGQFVALFNWTGIGTWTAV QGAAGLEAIGLTGFPAIIAFIILASCLNLLIISGSAMWTLMAAVFVPMFALLGYEPSFIQAAFRVGDSATQVITPLNPYM IVILGLLRRYEPDAGLGTLMSRLIPFVIPFWLAWATLLAIWFYADLPLGPGSAIFLEG >Mature_537_residues SSTTSKTSERQQPDAPTSKLGKWSDKFLNGVETLGNKLPTPFTLFLILFLITALASSIMAWMNVSVIVPGSDEELFVKGL FTGEGLTWLTTNLGANYIGFPPLLTVLPILLAVGVAERSGMLAALIRKLFGSAKKIVLPYAVGVIGVTASIMADAAFVVV PPLAAMVFKAAGRHPVAGLLGSFAAVGAGYSTAIVPTSLDALFAGITNAVMETLPGIATTEVNPVSNYYFNIASSIVLGL LCGFLIDKVLEPRMWRQDIATEYAESVEPISGTGDEEISATLTVQENRALAISMWTTLVTAIVVLVVVLIPGSPWRNEDG GFLPTSPLLSSVVFIVFLFFMVMGLAYGMVVGTIKNMDDVVNMMGEAIKDMIGFLVLAFILGQFVALFNWTGIGTWTAVQ GAAGLEAIGLTGFPAIIAFIILASCLNLLIISGSAMWTLMAAVFVPMFALLGYEPSFIQAAFRVGDSATQVITPLNPYMI VILGLLRRYEPDAGLGTLMSRLIPFVIPFWLAWATLLAIWFYADLPLGPGSAIFLEG
Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]
COG id: COG2978
COG function: function code H; Putative p-aminobenzoyl-glutamate transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081879, Length=506, Percent_Identity=36.7588932806324, Blast_Score=325, Evalue=5e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004697 - InterPro: IPR011540 [H]
Pfam domain/function: PF03806 ABG_transport [H]
EC number: NA
Molecular weight: Translated: 57279; Mature: 57148
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTTSKTSERQQPDAPTSKLGKWSDKFLNGVETLGNKLPTPFTLFLILFLITALASSIM CCCCCCCCHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AWMNVSVIVPGSDEELFVKGLFTGEGLTWLTTNLGANYIGFPPLLTVLPILLAVGVAERS HHHCCEEEECCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC GMLAALIRKLFGSAKKIVLPYAVGVIGVTASIMADAAFVVVPPLAAMVFKAAGRHPVAGL CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHH LGSFAAVGAGYSTAIVPTSLDALFAGITNAVMETLPGIATTEVNPVSNYYFNIASSIVLG HHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH LLCGFLIDKVLEPRMWRQDIATEYAESVEPISGTGDEEISATLTVQENRALAISMWTTLV HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHH TAIVVLVVVLIPGSPWRNEDGGFLPTSPLLSSVVFIVFLFFMVMGLAYGMVVGTIKNMDD HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVNMMGEAIKDMIGFLVLAFILGQFVALFNWTGIGTWTAVQGAAGLEAIGLTGFPAIIAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHCCCCCHHHHHHH IILASCLNLLIISGSAMWTLMAAVFVPMFALLGYEPSFIQAAFRVGDSATQVITPLNPYM HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCHHH IVILGLLRRYEPDAGLGTLMSRLIPFVIPFWLAWATLLAIWFYADLPLGPGSAIFLEG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC >Mature Secondary Structure SSTTSKTSERQQPDAPTSKLGKWSDKFLNGVETLGNKLPTPFTLFLILFLITALASSIM CCCCCCCHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AWMNVSVIVPGSDEELFVKGLFTGEGLTWLTTNLGANYIGFPPLLTVLPILLAVGVAERS HHHCCEEEECCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC GMLAALIRKLFGSAKKIVLPYAVGVIGVTASIMADAAFVVVPPLAAMVFKAAGRHPVAGL CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHH LGSFAAVGAGYSTAIVPTSLDALFAGITNAVMETLPGIATTEVNPVSNYYFNIASSIVLG HHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH LLCGFLIDKVLEPRMWRQDIATEYAESVEPISGTGDEEISATLTVQENRALAISMWTTLV HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHH TAIVVLVVVLIPGSPWRNEDGGFLPTSPLLSSVVFIVFLFFMVMGLAYGMVVGTIKNMDD HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVNMMGEAIKDMIGFLVLAFILGQFVALFNWTGIGTWTAVQGAAGLEAIGLTGFPAIIAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHCCCCCHHHHHHH IILASCLNLLIISGSAMWTLMAAVFVPMFALLGYEPSFIQAAFRVGDSATQVITPLNPYM HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCHHH IVILGLLRRYEPDAGLGTLMSRLIPFVIPFWLAWATLLAIWFYADLPLGPGSAIFLEG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]