Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is yajO [H]
Identifier: 145294218
GI number: 145294218
Start: 193058
End: 194005
Strand: Direct
Name: yajO [H]
Synonym: cgR_0174
Alternate gene names: 145294218
Gene position: 193058-194005 (Clockwise)
Preceding gene: 145294216
Following gene: 145294219
Centisome position: 5.83
GC content: 53.8
Gene sequence:
>948_bases ATGGAGCACGGCGTGACCGTTATTAAAGGCACTGAATTTGATGTTTTCCCACTAAACCTCGGTGGAAATACCTTTGGCTG GACCTCGAATAGGGAACAGACCTTCGCGGTTTTGGATGCATTCGTGGCAGCGGGAGGAAACTTTGTTGACACCGCCGATT CTTATTCTGCATGGGTTGAAGGCAATGAGGGTGGTGAGTCGGAGCGGGAGCTCGGCGCGTGGATTAAGGAACGTGGCGCA GACAAGCTGATCATTGCTACCAAGTCTGGTGCGTTGGAGCCTGTTGCTGGTCGTTCCCGTGAGGCAACTTTCAAGGCTGT CGAGGGTTCCCTGGAGCGTTTGGGCGTGGAATCGATCGATATTTTTTACTACCACTACGACGATGAGGCAGTCAGTATTG ATGAGCAGGTTGCTATCGCTAATGATCTGATTGCACAGGGCAAGATTAAGCACCTCGCATTATCTAACTACAGCGCGGAG CGTTTAGCCGAGTTCTTTGAGAAGTCTGTAGGAACTCCAGCGCAGCCGGTTGCTCTGCAACCGCACTACAACCTGGTGTC GAGGAAGGATTATGAGGAGAACGTGCAGCCACTCGCCGAGAAGCATGGCGTTGCAGTCTTCCCTTATTTCGCGCTTGCCG CGGGTCTTTTGACCGGAAAGTATACCTCCAAGGAGGATATTTCGGGTAAAGCGCGTGCGGGGCAGTTGGATCGTTACGCC AGCGATGAGGCGTTTGCCGTGGTGACAGAGTTGCGTGCTGTTGCCGATGAGTTGGGTGTTGCGCCAACGACTGTGGCGCT TGCGTGGTTGGTTGCGCATGGTGTGACCGCCCCGATTGCGTCCGTGTCCAAGGTAGAGCAGTTGAAGGATTTGATGGCTG TGAAGGATGTGGAGCTGAGCGCTGAGCAGCTTGCACGTTTGGATAAGGTTTCGGAGCCTTTCGCTTAA
Upstream 100 bases:
>100_bases TAAGACATCAACATATAGCTTCTGCTACTTTAAGAATTTTTATTCTGAAATTCTGTAGAAACGCTCCTATGCTCGGGGCA GTAAGTTGTGAGCATAGGAA
Downstream 100 bases:
>100_bases GCTCTCCTCAAAGTAAGTGATGCAAGTCATAACATTTGCATTACGGTTGCCTTATTTGCCGATATTTATTCGGTGAGTTA CTTAGTCTGGCTGGCATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MEHGVTVIKGTEFDVFPLNLGGNTFGWTSNREQTFAVLDAFVAAGGNFVDTADSYSAWVEGNEGGESERELGAWIKERGA DKLIIATKSGALEPVAGRSREATFKAVEGSLERLGVESIDIFYYHYDDEAVSIDEQVAIANDLIAQGKIKHLALSNYSAE RLAEFFEKSVGTPAQPVALQPHYNLVSRKDYEENVQPLAEKHGVAVFPYFALAAGLLTGKYTSKEDISGKARAGQLDRYA SDEAFAVVTELRAVADELGVAPTTVALAWLVAHGVTAPIASVSKVEQLKDLMAVKDVELSAEQLARLDKVSEPFA
Sequences:
>Translated_315_residues MEHGVTVIKGTEFDVFPLNLGGNTFGWTSNREQTFAVLDAFVAAGGNFVDTADSYSAWVEGNEGGESERELGAWIKERGA DKLIIATKSGALEPVAGRSREATFKAVEGSLERLGVESIDIFYYHYDDEAVSIDEQVAIANDLIAQGKIKHLALSNYSAE RLAEFFEKSVGTPAQPVALQPHYNLVSRKDYEENVQPLAEKHGVAVFPYFALAAGLLTGKYTSKEDISGKARAGQLDRYA SDEAFAVVTELRAVADELGVAPTTVALAWLVAHGVTAPIASVSKVEQLKDLMAVKDVELSAEQLARLDKVSEPFA >Mature_315_residues MEHGVTVIKGTEFDVFPLNLGGNTFGWTSNREQTFAVLDAFVAAGGNFVDTADSYSAWVEGNEGGESERELGAWIKERGA DKLIIATKSGALEPVAGRSREATFKAVEGSLERLGVESIDIFYYHYDDEAVSIDEQVAIANDLIAQGKIKHLALSNYSAE RLAEFFEKSVGTPAQPVALQPHYNLVSRKDYEENVQPLAEKHGVAVFPYFALAAGLLTGKYTSKEDISGKARAGQLDRYA SDEAFAVVTELRAVADELGVAPTTVALAWLVAHGVTAPIASVSKVEQLKDLMAVKDVELSAEQLARLDKVSEPFA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=312, Percent_Identity=27.5641025641026, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI4504825, Length=312, Percent_Identity=27.5641025641026, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI27436971, Length=303, Percent_Identity=29.042904290429, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI27436966, Length=281, Percent_Identity=29.1814946619217, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI27436962, Length=279, Percent_Identity=28.673835125448, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI27436964, Length=279, Percent_Identity=28.673835125448, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI223718702, Length=306, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI41152114, Length=299, Percent_Identity=29.7658862876254, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI41327764, Length=242, Percent_Identity=30.5785123966942, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI87081735, Length=323, Percent_Identity=34.6749226006192, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1789375, Length=324, Percent_Identity=27.7777777777778, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1789199, Length=337, Percent_Identity=25.2225519287834, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788070, Length=277, Percent_Identity=25.2707581227437, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788081, Length=289, Percent_Identity=26.643598615917, Blast_Score=76, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6319958, Length=308, Percent_Identity=30.1948051948052, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323998, Length=330, Percent_Identity=29.6969696969697, Blast_Score=113, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6319951, Length=308, Percent_Identity=27.5974025974026, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6325169, Length=335, Percent_Identity=22.3880597014925, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6322615, Length=256, Percent_Identity=25.78125, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6321052, Length=159, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34002; Mature: 34002
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHGVTVIKGTEFDVFPLNLGGNTFGWTSNREQTFAVLDAFVAAGGNFVDTADSYSAWVE CCCCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE GNEGGESERELGAWIKERGADKLIIATKSGALEPVAGRSREATFKAVEGSLERLGVESID CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE IFYYHYDDEAVSIDEQVAIANDLIAQGKIKHLALSNYSAERLAEFFEKSVGTPAQPVALQ EEEEEECCCEECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEC PHYNLVSRKDYEENVQPLAEKHGVAVFPYFALAAGLLTGKYTSKEDISGKARAGQLDRYA CCCCHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHC SDEAFAVVTELRAVADELGVAPTTVALAWLVAHGVTAPIASVSKVEQLKDLMAVKDVELS CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC AEQLARLDKVSEPFA HHHHHHHHHHCCCCC >Mature Secondary Structure MEHGVTVIKGTEFDVFPLNLGGNTFGWTSNREQTFAVLDAFVAAGGNFVDTADSYSAWVE CCCCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE GNEGGESERELGAWIKERGADKLIIATKSGALEPVAGRSREATFKAVEGSLERLGVESID CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE IFYYHYDDEAVSIDEQVAIANDLIAQGKIKHLALSNYSAERLAEFFEKSVGTPAQPVALQ EEEEEECCCEECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEC PHYNLVSRKDYEENVQPLAEKHGVAVFPYFALAAGLLTGKYTSKEDISGKARAGQLDRYA CCCCHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHC SDEAFAVVTELRAVADELGVAPTTVALAWLVAHGVTAPIASVSKVEQLKDLMAVKDVELS CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC AEQLARLDKVSEPFA HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]