Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is abgB [H]
Identifier: 145294220
GI number: 145294220
Start: 195776
End: 197164
Strand: Direct
Name: abgB [H]
Synonym: cgR_0176
Alternate gene names: 145294220
Gene position: 195776-197164 (Clockwise)
Preceding gene: 145294219
Following gene: 145294221
Centisome position: 5.91
GC content: 54.57
Gene sequence:
>1389_bases ATGAGTACTGACAATTTTTCTCCACAAGTTCCGTCGACTGTGTATTTGGATTACATGGAGCAAGGGATTGCCGCGCGTAA AGCGGAGGCAGAGTCTAACGCCAGCACGCAGGGGGAGAGCCCGGATTATCCAGGCCAGCAGGTTATTTGGCGCCTGATCC AGGAATCAGGGGAGTCATTGCGTGATGAACTGCGCACACTGGCTTTCATGCTGCACGACCATCCGGAAGAAGCGTTCGAG GAGGTGTTCGCCACCGAGGAAATCACAAAACTTCTGCAAAATCATGGTTTTGAGGTTCAGAGTGGAGTTTATGGTGTTAA AACCGCTCTAGAAACTAGTTTTGAAACCCCTGGTTATGATCCAGCGCAGCACCCAAGCATTGCGATCTTGGCGGAATACG ATGCCCTTCCAGAGATCGGCCATGCGTGCGGGCACAATATCATCGCAGCAGCTGGTGTTGGCGCATTTTTAGCTGTTACC AACATGATCAAAACTGCCGAAGTGAAAGGCGTGGATCACCTCGACTTTGAAGGCCGGATCGTGCTGTTGGGAACACCTGC TGAGGAGGGGCATTCCGGCAAGGAATACATGATCCGAAATGGCGCATTCGATGGCATTGATGCATCGATTATGATGCACC CCTTTGGCTTCGATCTGGCGGAGCATGTTTGGGTGGGCAGACGTACCATGACGGCGACGTTCCACGGTGTCTCTGCACAC GCGTCTTCGCAGCCTTTCATGGGTAAAAATGCCCTCGACGCTGCAAGTTTGGCGTACCAGGGCTTCGGAGTTTTGCGTCA GCAAATGCCACCGAGCGACCGCCTTCACGCCATTATTACGGAAGGTGGAAACCGGCCAAGCATCATTCCAGACACTGCAA CGATGTCGCTGTACGTGCGTTCTTTGTTGCCGGAAGCACTCAAAGACATATCGAAACGCGTGGATGATGTGCTCGATGGG GCGGCCTTGATGGCGGGGGTTGGCGTCGAAAAGCAATGGGATGTGCACCCAGCTAGCTTGCCCGTGCGCAACAATCATGT GTTGGCGCGGCGTTGGGCAAAAACGCAGAATCTGCGTGGTCGAACGGCGCTTTCGGAGGGCATTTTGCCCGACACTCTGG CAGCATCGACTGATTTTGGCAATGTCTCGCACCTGATTCCGGGCATTCATCCCATGGTGAAGATTTCACCGGAAAACGTC GCGCTCCACACCAAGGAATTCGCTGCTTACGCGCGCACAGAAGAGGCGATCGACGCTGCTGTCGATGCCGCAATCGGGCT CGCGCAAGTCGCCGTTGACGCGCTTGCAGATCCGAAAATGCTTATCGACGCCACCCTCGAGTTCACCAACTCCGGCGGCG TGCTTAAAGCGGGAGACTATTTGGCTTAG
Upstream 100 bases:
>100_bases CCCTTTCTGGCTAGCCTGGGCTACATTGTTGGCAATTTGGTTCTACGCCGATTTGCCGCTTGGACCTGGCTCTGCGATCT TCCTCGAAGGATAAGTTTTC
Downstream 100 bases:
>100_bases GCAATGACTCCGAAACCTTCAAGAACGTGTGGCACTAACAATTGCGGACTATCCTTGGGAACTGTTTTAGATTTTATTCA GGGTAGGGAGATTGTTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MSTDNFSPQVPSTVYLDYMEQGIAARKAEAESNASTQGESPDYPGQQVIWRLIQESGESLRDELRTLAFMLHDHPEEAFE EVFATEEITKLLQNHGFEVQSGVYGVKTALETSFETPGYDPAQHPSIAILAEYDALPEIGHACGHNIIAAAGVGAFLAVT NMIKTAEVKGVDHLDFEGRIVLLGTPAEEGHSGKEYMIRNGAFDGIDASIMMHPFGFDLAEHVWVGRRTMTATFHGVSAH ASSQPFMGKNALDAASLAYQGFGVLRQQMPPSDRLHAIITEGGNRPSIIPDTATMSLYVRSLLPEALKDISKRVDDVLDG AALMAGVGVEKQWDVHPASLPVRNNHVLARRWAKTQNLRGRTALSEGILPDTLAASTDFGNVSHLIPGIHPMVKISPENV ALHTKEFAAYARTEEAIDAAVDAAIGLAQVAVDALADPKMLIDATLEFTNSGGVLKAGDYLA
Sequences:
>Translated_462_residues MSTDNFSPQVPSTVYLDYMEQGIAARKAEAESNASTQGESPDYPGQQVIWRLIQESGESLRDELRTLAFMLHDHPEEAFE EVFATEEITKLLQNHGFEVQSGVYGVKTALETSFETPGYDPAQHPSIAILAEYDALPEIGHACGHNIIAAAGVGAFLAVT NMIKTAEVKGVDHLDFEGRIVLLGTPAEEGHSGKEYMIRNGAFDGIDASIMMHPFGFDLAEHVWVGRRTMTATFHGVSAH ASSQPFMGKNALDAASLAYQGFGVLRQQMPPSDRLHAIITEGGNRPSIIPDTATMSLYVRSLLPEALKDISKRVDDVLDG AALMAGVGVEKQWDVHPASLPVRNNHVLARRWAKTQNLRGRTALSEGILPDTLAASTDFGNVSHLIPGIHPMVKISPENV ALHTKEFAAYARTEEAIDAAVDAAIGLAQVAVDALADPKMLIDATLEFTNSGGVLKAGDYLA >Mature_461_residues STDNFSPQVPSTVYLDYMEQGIAARKAEAESNASTQGESPDYPGQQVIWRLIQESGESLRDELRTLAFMLHDHPEEAFEE VFATEEITKLLQNHGFEVQSGVYGVKTALETSFETPGYDPAQHPSIAILAEYDALPEIGHACGHNIIAAAGVGAFLAVTN MIKTAEVKGVDHLDFEGRIVLLGTPAEEGHSGKEYMIRNGAFDGIDASIMMHPFGFDLAEHVWVGRRTMTATFHGVSAHA SSQPFMGKNALDAASLAYQGFGVLRQQMPPSDRLHAIITEGGNRPSIIPDTATMSLYVRSLLPEALKDISKRVDDVLDGA ALMAGVGVEKQWDVHPASLPVRNNHVLARRWAKTQNLRGRTALSEGILPDTLAASTDFGNVSHLIPGIHPMVKISPENVA LHTKEFAAYARTEEAIDAAVDAAIGLAQVAVDALADPKMLIDATLEFTNSGGVLKAGDYLA
Specific function: Required but not essential for aminobenzoyl-glutamate utilization. May participate in hydrolysis of aminobenzoyl- glutamate to aminobenzoate, either alone or in combination with AbgA [H]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI58082085, Length=393, Percent_Identity=34.8600508905852, Blast_Score=200, Evalue=3e-51, Organism=Escherichia coli, GI1787598, Length=470, Percent_Identity=28.2978723404255, Blast_Score=149, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017145 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF01546 Peptidase_M20 [H]
EC number: NA
Molecular weight: Translated: 49791; Mature: 49659
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDNFSPQVPSTVYLDYMEQGIAARKAEAESNASTQGESPDYPGQQVIWRLIQESGESL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RDELRTLAFMLHDHPEEAFEEVFATEEITKLLQNHGFEVQSGVYGVKTALETSFETPGYD HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHCCCCCCCC PAQHPSIAILAEYDALPEIGHACGHNIIAAAGVGAFLAVTNMIKTAEVKGVDHLDFEGRI CCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE VLLGTPAEEGHSGKEYMIRNGAFDGIDASIMMHPFGFDLAEHVWVGRRTMTATFHGVSAH EEEECCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHCCEEEEEEECCCCCC ASSQPFMGKNALDAASLAYQGFGVLRQQMPPSDRLHAIITEGGNRPSIIPDTATMSLYVR CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHH SLLPEALKDISKRVDDVLDGAALMAGVGVEKQWDVHPASLPVRNNHVLARRWAKTQNLRG HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC RTALSEGILPDTLAASTDFGNVSHLIPGIHPMVKISPENVALHTKEFAAYARTEEAIDAA CHHHHCCCCCCHHHCCCCCCCHHHHCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHH VDAAIGLAQVAVDALADPKMLIDATLEFTNSGGVLKAGDYLA HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCC >Mature Secondary Structure STDNFSPQVPSTVYLDYMEQGIAARKAEAESNASTQGESPDYPGQQVIWRLIQESGESL CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RDELRTLAFMLHDHPEEAFEEVFATEEITKLLQNHGFEVQSGVYGVKTALETSFETPGYD HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHCCCCCCCC PAQHPSIAILAEYDALPEIGHACGHNIIAAAGVGAFLAVTNMIKTAEVKGVDHLDFEGRI CCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE VLLGTPAEEGHSGKEYMIRNGAFDGIDASIMMHPFGFDLAEHVWVGRRTMTATFHGVSAH EEEECCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHCCEEEEEEECCCCCC ASSQPFMGKNALDAASLAYQGFGVLRQQMPPSDRLHAIITEGGNRPSIIPDTATMSLYVR CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHH SLLPEALKDISKRVDDVLDGAALMAGVGVEKQWDVHPASLPVRNNHVLARRWAKTQNLRG HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC RTALSEGILPDTLAASTDFGNVSHLIPGIHPMVKISPENVALHTKEFAAYARTEEAIDAA CHHHHCCCCCCHHHCCCCCCCHHHHCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHH VDAAIGLAQVAVDALADPKMLIDATLEFTNSGGVLKAGDYLA HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 9829935 [H]