Click here to switch to the map view.

The map label for this gene is spoIIR [H]

Identifier: 138896952

GI number: 138896952

Start: 3427100

End: 3428011

Strand: Reverse

Name: spoIIR [H]

Synonym: GTNG_3321

Alternate gene names: 138896952

Gene position: 3428011-3427100 (Counterclockwise)

Preceding gene: 138896953

Following gene: 138896951

Centisome position: 96.56

GC content: 51.97

Gene sequence:

>912_bases
ATGGTGATCAGGGGAAATTCCATCGCTGTATGTTTATATATCATTCTATTAATAACAGGCGTCCTCGTTCATCTATACGG
TCAGCAGACGGATGCGGGGGCAAACGCGACGGTCATGGTTCCCAACGAGGCGATTCGCCTGCGCATTTTGGCGAACAGCG
ATAACGTTGCTGACCAAGAATTGAAGCGAAAAGTGCGCGATGCGGTGAACGCGCAAATTAACGAATGGGTGGCCGAACTG
ACGTCGTTCGAAGAAGCGAAGCGTGTCATTCGCTCCCACTTGCCGGACATCGAGCAGACGGTCGCTCGTGTGCTCCGTGA
TGAGCAAAGCAATCAGTCGTACAAGGTGGAGTTCGGTTCGGTTCGCTTTCCGACGAAAGTGTACGGTAATTACGTTTATC
CAGCCGGCACGTACGATGCGGTTCTTATTACGCTCGGGGCAGGAAAAGGGGCAAACTGGTGGTGTGTCTTGTTTCCGCCG
CTTTGTTTTCTCGATTTTTCCAACGGTGACGCTGTGATGATGAGAGAGAAAGAGATGCCGGCAAACGAGAACGAGGCAGA
CAAACCTGCACCAACCGAGGCCGACGCGCCTATGAAAGAAAAGCGGAGTAAAAAAGAAGCGGCACAGCCGGACGGACAAG
AAGATGAGAGCATCGCGATAGCCATAGGTGAGGAGACTGAACGTCACACAGTGGCTGAGGAAATCAATGAGGATAGTGTG
AGCACGAGCGTGAGTGATGGAAATCGAGCTGTGGATGACACGAGCCTTGCTGCGATTGACATCGGCGAAGACGCGAGTGA
AGAGAAACAAATGGATAGCGGAAATGCTTCCCCCGTCGTCATGGCTGAGTCGGAGCAGCGGATCGAAGTGAAATTCTTCT
TCAAAGAGTTGCTTGCCCACCTTATTCCATAG

Upstream 100 bases:

>100_bases
GCAAAGACCGAATGGTCTATATGACAAGAAAAAATTAGATTCATAGGTTTAAAATGAGGCGGCGCCGTCCACAATGAATG
TTGAAAGGACGGTGCCGATA

Downstream 100 bases:

>100_bases
GCTCATATCCACAATGTTATCCACAAAAACAACAGATTTATTCACAATTTGTGTATAAATGTGGGTAACCGACGAGAGCT
AGTTCGGTACTTCTGAGCAA

Product: stage II sporulation protein R

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MVIRGNSIAVCLYIILLITGVLVHLYGQQTDAGANATVMVPNEAIRLRILANSDNVADQELKRKVRDAVNAQINEWVAEL
TSFEEAKRVIRSHLPDIEQTVARVLRDEQSNQSYKVEFGSVRFPTKVYGNYVYPAGTYDAVLITLGAGKGANWWCVLFPP
LCFLDFSNGDAVMMREKEMPANENEADKPAPTEADAPMKEKRSKKEAAQPDGQEDESIAIAIGEETERHTVAEEINEDSV
STSVSDGNRAVDDTSLAAIDIGEDASEEKQMDSGNASPVVMAESEQRIEVKFFFKELLAHLIP

Sequences:

>Translated_303_residues
MVIRGNSIAVCLYIILLITGVLVHLYGQQTDAGANATVMVPNEAIRLRILANSDNVADQELKRKVRDAVNAQINEWVAEL
TSFEEAKRVIRSHLPDIEQTVARVLRDEQSNQSYKVEFGSVRFPTKVYGNYVYPAGTYDAVLITLGAGKGANWWCVLFPP
LCFLDFSNGDAVMMREKEMPANENEADKPAPTEADAPMKEKRSKKEAAQPDGQEDESIAIAIGEETERHTVAEEINEDSV
STSVSDGNRAVDDTSLAAIDIGEDASEEKQMDSGNASPVVMAESEQRIEVKFFFKELLAHLIP
>Mature_303_residues
MVIRGNSIAVCLYIILLITGVLVHLYGQQTDAGANATVMVPNEAIRLRILANSDNVADQELKRKVRDAVNAQINEWVAEL
TSFEEAKRVIRSHLPDIEQTVARVLRDEQSNQSYKVEFGSVRFPTKVYGNYVYPAGTYDAVLITLGAGKGANWWCVLFPP
LCFLDFSNGDAVMMREKEMPANENEADKPAPTEADAPMKEKRSKKEAAQPDGQEDESIAIAIGEETERHTVAEEINEDSV
STSVSDGNRAVDDTSLAAIDIGEDASEEKQMDSGNASPVVMAESEQRIEVKFFFKELLAHLIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014202 [H]

Pfam domain/function: PF09551 Spore_II_R [H]

EC number: NA

Molecular weight: Translated: 33407; Mature: 33407

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIRGNSIAVCLYIILLITGVLVHLYGQQTDAGANATVMVPNEAIRLRILANSDNVADQE
CEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHH
LKRKVRDAVNAQINEWVAELTSFEEAKRVIRSHLPDIEQTVARVLRDEQSNQSYKVEFGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECC
VRFPTKVYGNYVYPAGTYDAVLITLGAGKGANWWCVLFPPLCFLDFSNGDAVMMREKEMP
EECCHHHHCCEECCCCCCCEEEEEEECCCCCCEEEEEECCEEEEECCCCCEEEEECCCCC
ANENEADKPAPTEADAPMKEKRSKKEAAQPDGQEDESIAIAIGEETERHTVAEEINEDSV
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHC
STSVSDGNRAVDDTSLAAIDIGEDASEEKQMDSGNASPVVMAESEQRIEVKFFFKELLAH
CCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
LIP
HCC
>Mature Secondary Structure
MVIRGNSIAVCLYIILLITGVLVHLYGQQTDAGANATVMVPNEAIRLRILANSDNVADQE
CEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHH
LKRKVRDAVNAQINEWVAELTSFEEAKRVIRSHLPDIEQTVARVLRDEQSNQSYKVEFGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECC
VRFPTKVYGNYVYPAGTYDAVLITLGAGKGANWWCVLFPPLCFLDFSNGDAVMMREKEMP
EECCHHHHCCEECCCCCCCEEEEEEECCCCCCEEEEEECCEEEEECCCCCEEEEECCCCC
ANENEADKPAPTEADAPMKEKRSKKEAAQPDGQEDESIAIAIGEETERHTVAEEINEDSV
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHC
STSVSDGNRAVDDTSLAAIDIGEDASEEKQMDSGNASPVVMAESEQRIEVKFFFKELLAH
CCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
LIP
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]