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The map label for this gene is amaB [H]

Identifier: 138896823

GI number: 138896823

Start: 3288234

End: 3289463

Strand: Reverse

Name: amaB [H]

Synonym: GTNG_3186

Alternate gene names: 138896823

Gene position: 3289463-3288234 (Counterclockwise)

Preceding gene: 138896824

Following gene: 138896822

Centisome position: 92.65

GC content: 57.56

Gene sequence:

>1230_bases
TTGGTTCAGGGGGAACGTCTTTGGCGACGACTCATGGAACTAGGGGAAGTTGGGAAGCAGCCAGGCGGCGGTATTACACG
ACTCTCATTCACCACGGAGGAACGGCGAGCGAAAGACTTGGTTGCCGCTTATATGCGCGAAGCAGGTCTGTCCGTGTACG
AAGACGCAGCGGGCAACTTGATCGGGCGGAAAGAAGGCACGAATCCGGAGGCTCCGGTGGTGCTCATTGGCTCACATGTC
GATTCGGTTTACAACGGTGGGTGTTTTGACGGTCCGCTCGGGGTGTTGGCAGGCATCGAGGTCGTTCAGGCGATGAACGA
GCAAGGAGTGAAGACACATCACCCGATTGAAGTTGTGGCGTTTACGGACGAAGAAGGAGCCCGCTTTCGTTTCGGCATGA
TCGGCAGTCGCGCCATGGCTGGGACGTTGCCGTCAGAAGCGCTCAATTACTGTGATGCGAATGGAATTTCCATCGCCGAG
GCGATGAGGCAGGCGGGGCTTGACCCGCACCGCTTGCATGAAGCGGCACGAAAACCTGGGACGGTCAAAGCGTATGTTGA
ATTACATATTGAACAAGGACGGGTACTTGAGGAGGCAGGACTTCCTGTTGGCATCGTCACCGGCATCGCCGGGCTTGTCT
GGGTCAAATTCACCGTCGAAGGAAAGGCGGAGCATGCCGGCGCGACACCGATGTCGTTGCGTCGCGACCCGATGGCCGCG
GCCGCTCAAATCATCGCAGTAATTGAGGAAGAGGCGCGACGAACCGGGACAACGGTCGGAACGGTCGGACAGCTTCACGT
GTTTCCAGGCGGCATTAATATTATCCCGGAACGGGTCGAATTTGTGTTGGACTTGCGTGACTTGCAGACTGAGGTGCGCG
ATCAAGTGTGGCAGACGGTGGCTGCGCGGGCACAAGTGATCGCGAAGGAACGGAACGTTCGCGTCACGACTGAATGGCTG
CAAGACATGCCGCCGGTGTTATGTTCCGACGAGGTGAAGCATGCCGCGGAAGTAGCGTGCAAGCAGCTCGGTTATCCGCC
GTTTTGGCTGCCAAGCGGCGCAGCCCATGACGGGGTGCAGCTCGCTCCTCTCTGTCCAATCGGAATGATTTTTGTCCGCT
CTCAAGACGGGGTGAGCCATAGCCCTGCAGAATGGAGCACAAAAGATGATTGCGTGGCAGGGGCGGCTGTTCTTTATCAT
ACTGTATGGCAGCTGGCTCAGGGACAATAA

Upstream 100 bases:

>100_bases
TATGATTTGTAATATTTGAAAATTTCGTTTAATACGTTATAATTAAGGACATAACCGAAATTCATCCGTAAATCTCCTGA
AGGAGAAAGTGGGGAGTAAA

Downstream 100 bases:

>100_bases
CGAAAAAGACAAACGAAGGGTGCGTCAAACGTTTAACGAACCTCTCATACGAGCCATTTCATTGAGCATCGTATGACATG
CCTAGAGTTGAAGTTGACCT

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MVQGERLWRRLMELGEVGKQPGGGITRLSFTTEERRAKDLVAAYMREAGLSVYEDAAGNLIGRKEGTNPEAPVVLIGSHV
DSVYNGGCFDGPLGVLAGIEVVQAMNEQGVKTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPSEALNYCDANGISIAE
AMRQAGLDPHRLHEAARKPGTVKAYVELHIEQGRVLEEAGLPVGIVTGIAGLVWVKFTVEGKAEHAGATPMSLRRDPMAA
AAQIIAVIEEEARRTGTTVGTVGQLHVFPGGINIIPERVEFVLDLRDLQTEVRDQVWQTVAARAQVIAKERNVRVTTEWL
QDMPPVLCSDEVKHAAEVACKQLGYPPFWLPSGAAHDGVQLAPLCPIGMIFVRSQDGVSHSPAEWSTKDDCVAGAAVLYH
TVWQLAQGQ

Sequences:

>Translated_409_residues
MVQGERLWRRLMELGEVGKQPGGGITRLSFTTEERRAKDLVAAYMREAGLSVYEDAAGNLIGRKEGTNPEAPVVLIGSHV
DSVYNGGCFDGPLGVLAGIEVVQAMNEQGVKTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPSEALNYCDANGISIAE
AMRQAGLDPHRLHEAARKPGTVKAYVELHIEQGRVLEEAGLPVGIVTGIAGLVWVKFTVEGKAEHAGATPMSLRRDPMAA
AAQIIAVIEEEARRTGTTVGTVGQLHVFPGGINIIPERVEFVLDLRDLQTEVRDQVWQTVAARAQVIAKERNVRVTTEWL
QDMPPVLCSDEVKHAAEVACKQLGYPPFWLPSGAAHDGVQLAPLCPIGMIFVRSQDGVSHSPAEWSTKDDCVAGAAVLYH
TVWQLAQGQ
>Mature_409_residues
MVQGERLWRRLMELGEVGKQPGGGITRLSFTTEERRAKDLVAAYMREAGLSVYEDAAGNLIGRKEGTNPEAPVVLIGSHV
DSVYNGGCFDGPLGVLAGIEVVQAMNEQGVKTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPSEALNYCDANGISIAE
AMRQAGLDPHRLHEAARKPGTVKAYVELHIEQGRVLEEAGLPVGIVTGIAGLVWVKFTVEGKAEHAGATPMSLRRDPMAA
AAQIIAVIEEEARRTGTTVGTVGQLHVFPGGINIIPERVEFVLDLRDLQTEVRDQVWQTVAARAQVIAKERNVRVTTEWL
QDMPPVLCSDEVKHAAEVACKQLGYPPFWLPSGAAHDGVQLAPLCPIGMIFVRSQDGVSHSPAEWSTKDDCVAGAAVLYH
TVWQLAQGQ

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=396, Percent_Identity=35.1010101010101, Blast_Score=219, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44146; Mature: 44146

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQGERLWRRLMELGEVGKQPGGGITRLSFTTEERRAKDLVAAYMREAGLSVYEDAAGNL
CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHCCCE
IGRKEGTNPEAPVVLIGSHVDSVYNGGCFDGPLGVLAGIEVVQAMNEQGVKTHHPIEVVA
ECCCCCCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
FTDEEGARFRFGMIGSRAMAGTLPSEALNYCDANGISIAEAMRQAGLDPHRLHEAARKPG
EECCCCCEEEEECCCCHHHHCCCCHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHCCCC
TVKAYVELHIEQGRVLEEAGLPVGIVTGIAGLVWVKFTVEGKAEHAGATPMSLRRDPMAA
CEEEEEEEEECCCCCHHHCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCHHHCCCHHHH
AAQIIAVIEEEARRTGTTVGTVGQLHVFPGGINIIPERVEFVLDLRDLQTEVRDQVWQTV
HHHHHHHHHHHHHHCCCCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AARAQVIAKERNVRVTTEWLQDMPPVLCSDEVKHAAEVACKQLGYPPFWLPSGAAHDGVQ
HHHHHHHHHCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
LAPLCPIGMIFVRSQDGVSHSPAEWSTKDDCVAGAAVLYHTVWQLAQGQ
ECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVQGERLWRRLMELGEVGKQPGGGITRLSFTTEERRAKDLVAAYMREAGLSVYEDAAGNL
CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHCCCE
IGRKEGTNPEAPVVLIGSHVDSVYNGGCFDGPLGVLAGIEVVQAMNEQGVKTHHPIEVVA
ECCCCCCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
FTDEEGARFRFGMIGSRAMAGTLPSEALNYCDANGISIAEAMRQAGLDPHRLHEAARKPG
EECCCCCEEEEECCCCHHHHCCCCHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHCCCC
TVKAYVELHIEQGRVLEEAGLPVGIVTGIAGLVWVKFTVEGKAEHAGATPMSLRRDPMAA
CEEEEEEEEECCCCCHHHCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCHHHCCCHHHH
AAQIIAVIEEEARRTGTTVGTVGQLHVFPGGINIIPERVEFVLDLRDLQTEVRDQVWQTV
HHHHHHHHHHHHHHCCCCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AARAQVIAKERNVRVTTEWLQDMPPVLCSDEVKHAAEVACKQLGYPPFWLPSGAAHDGVQ
HHHHHHHHHCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
LAPLCPIGMIFVRSQDGVSHSPAEWSTKDDCVAGAAVLYHTVWQLAQGQ
ECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]