| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138896824
Identifier: 138896824
GI number: 138896824
Start: 3289709
End: 3291016
Strand: Reverse
Name: 138896824
Synonym: GTNG_3187
Alternate gene names: NA
Gene position: 3291016-3289709 (Counterclockwise)
Preceding gene: 138896825
Following gene: 138896823
Centisome position: 92.7
GC content: 50.76
Gene sequence:
>1308_bases GTGTGCGTCATTCGCATTCGGTTAGGTATATTAGGAGCAGACGACTCGTTACCGATTATTCAATCGGTGGTGGAGGAATA TAAAGAATTCGTTTGCCTTCCAGTCGTTTATTGGAACGAAAGTGAAATTCTCGACTTGATTCGTCCGCTTGCCTCTGAGG TCGATATGTGGCTGTTTTCCGGACAAGTGCCATATTCAATCGCCAAGCAGTCCGGTGAGATCGAGGTGCCGCTGTTTTAC GTGCCGCATACCGGGGCGAGCTTATATCGTACGTTGCTGCAGGCGTATTATACCAACCAAATTCCGATCTCTCAGCTAAG CTTTGATACATATGAGCGCGGCGAAGTGGAGCGACTGCTTGAGGAAGCCGACATTAAAGAGCCGGTTCCGCATATCAAGC ATTACGAAGGAGGCATTTCCGCTCAAGAGCTTGCTAGTTATCATTACGACTTATGGAGGCAAGGGAAAACGAAAGCCGCC GTCACTTGCCTACGAACCGCTCATCTGGAAATGGAAAAAATGGGGATGCCAGTGTATCGGGTGCTGCCCGCTCGTTCAGC TGTTGAAGCGGTCGTGCAAACGATCATTCGCACAGGGGAAATGCTCCATGTACAAGATGCACAAGTCGCCGTGCAGATGA TCGAAGTGGATTCGATGATGATTACATCCCCGGAGGCATTTTCAACGGATGAGATTTATAAAATGGAACTGAAGGCGACA GAAAAACTGTTGCAGTATACGAAAAAAGTACAAGGATCGCTCAAATGCGCCGGACCGGGTCGCTACGTCATTTTTACAAC AAGAGGTGCGTTAAAAGAGATGACCGCCAGCTATAAAACGATTCCTTCTGAGGAGGAGATGGCACACCTTTATGACGAAA TCGTGGCGTGCGGCATTGGCATCGGGCGAACAGCGTACGAGGCGGAAATCCAAGCGGGAAAGGCATTTTTGCATGCGAAA CACTGCGGAAGAGGAGCTTGGATGGTTGCCTTTGATGATGGGACGATTGCAGGTCCGTTAGGAAAGGGGGAGCGAATTCG TTACTCGCTCGGCGATGAGGAGCTGCGGCAACTGGCCAGCCGCACGAGTTTAAGCGCTGCGACGCTTGGCAAGCTTCAGG CTGTTTTGCGCAAGCGAGGAAAGAACGAGATTGAGGCACATGAGTTGGCTGTCTACATGGGAATTTTGCCGCGCAGTGCC CGCCGGATTTTAAAAGAATTAGAGGCTGCTGGCCTTGCCGAGGCGATCGGGGAAACCAGTCCGTATCCCCGTGGACGCCC GCGGAAAGTGTATCGCATTTTTTTATAA
Upstream 100 bases:
>100_bases ACGGCTTTGACGTAGGTTGATGTTCCCGAACGGGCAATCAGAGGAGTTTCGGGGAAGCAAGACATGCAGATGAGGACGTT GTTAGCCCTCGGGCGGGGAG
Downstream 100 bases:
>100_bases TCATCAGATGGTGAATCGGCTTCTGCTGTTTGTGGAAGCCGATTTTTATCGTTGTGGCTAAAAAGGTGCGGTCGTCAAGG TGAAATGGGCCGCTCGCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MCVIRIRLGILGADDSLPIIQSVVEEYKEFVCLPVVYWNESEILDLIRPLASEVDMWLFSGQVPYSIAKQSGEIEVPLFY VPHTGASLYRTLLQAYYTNQIPISQLSFDTYERGEVERLLEEADIKEPVPHIKHYEGGISAQELASYHYDLWRQGKTKAA VTCLRTAHLEMEKMGMPVYRVLPARSAVEAVVQTIIRTGEMLHVQDAQVAVQMIEVDSMMITSPEAFSTDEIYKMELKAT EKLLQYTKKVQGSLKCAGPGRYVIFTTRGALKEMTASYKTIPSEEEMAHLYDEIVACGIGIGRTAYEAEIQAGKAFLHAK HCGRGAWMVAFDDGTIAGPLGKGERIRYSLGDEELRQLASRTSLSAATLGKLQAVLRKRGKNEIEAHELAVYMGILPRSA RRILKELEAAGLAEAIGETSPYPRGRPRKVYRIFL
Sequences:
>Translated_435_residues MCVIRIRLGILGADDSLPIIQSVVEEYKEFVCLPVVYWNESEILDLIRPLASEVDMWLFSGQVPYSIAKQSGEIEVPLFY VPHTGASLYRTLLQAYYTNQIPISQLSFDTYERGEVERLLEEADIKEPVPHIKHYEGGISAQELASYHYDLWRQGKTKAA VTCLRTAHLEMEKMGMPVYRVLPARSAVEAVVQTIIRTGEMLHVQDAQVAVQMIEVDSMMITSPEAFSTDEIYKMELKAT EKLLQYTKKVQGSLKCAGPGRYVIFTTRGALKEMTASYKTIPSEEEMAHLYDEIVACGIGIGRTAYEAEIQAGKAFLHAK HCGRGAWMVAFDDGTIAGPLGKGERIRYSLGDEELRQLASRTSLSAATLGKLQAVLRKRGKNEIEAHELAVYMGILPRSA RRILKELEAAGLAEAIGETSPYPRGRPRKVYRIFL >Mature_435_residues MCVIRIRLGILGADDSLPIIQSVVEEYKEFVCLPVVYWNESEILDLIRPLASEVDMWLFSGQVPYSIAKQSGEIEVPLFY VPHTGASLYRTLLQAYYTNQIPISQLSFDTYERGEVERLLEEADIKEPVPHIKHYEGGISAQELASYHYDLWRQGKTKAA VTCLRTAHLEMEKMGMPVYRVLPARSAVEAVVQTIIRTGEMLHVQDAQVAVQMIEVDSMMITSPEAFSTDEIYKMELKAT EKLLQYTKKVQGSLKCAGPGRYVIFTTRGALKEMTASYKTIPSEEEMAHLYDEIVACGIGIGRTAYEAEIQAGKAFLHAK HCGRGAWMVAFDDGTIAGPLGKGERIRYSLGDEELRQLASRTSLSAATLGKLQAVLRKRGKNEIEAHELAVYMGILPRSA RRILKELEAAGLAEAIGETSPYPRGRPRKVYRIFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48687; Mature: 48687
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVIRIRLGILGADDSLPIIQSVVEEYKEFVCLPVVYWNESEILDLIRPLASEVDMWLFS CEEEEEEEEEECCCCCCHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHEEC GQVPYSIAKQSGEIEVPLFYVPHTGASLYRTLLQAYYTNQIPISQLSFDTYERGEVERLL CCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHH EEADIKEPVPHIKHYEGGISAQELASYHYDLWRQGKTKAAVTCLRTAHLEMEKMGMPVYR HHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEE VLPARSAVEAVVQTIIRTGEMLHVQDAQVAVQMIEVDSMMITSPEAFSTDEIYKMELKAT HHCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCEEEECCCCCCCCHHEEHHHHHH EKLLQYTKKVQGSLKCAGPGRYVIFTTRGALKEMTASYKTIPSEEEMAHLYDEIVACGIG HHHHHHHHHHCCCEEECCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC IGRTAYEAEIQAGKAFLHAKHCGRGAWMVAFDDGTIAGPLGKGERIRYSLGDEELRQLAS CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCEEEEECCHHHHHHHHH RTSLSAATLGKLQAVLRKRGKNEIEAHELAVYMGILPRSARRILKELEAAGLAEAIGETS HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC PYPRGRPRKVYRIFL CCCCCCCCCEEEEEC >Mature Secondary Structure MCVIRIRLGILGADDSLPIIQSVVEEYKEFVCLPVVYWNESEILDLIRPLASEVDMWLFS CEEEEEEEEEECCCCCCHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHEEC GQVPYSIAKQSGEIEVPLFYVPHTGASLYRTLLQAYYTNQIPISQLSFDTYERGEVERLL CCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHH EEADIKEPVPHIKHYEGGISAQELASYHYDLWRQGKTKAAVTCLRTAHLEMEKMGMPVYR HHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEE VLPARSAVEAVVQTIIRTGEMLHVQDAQVAVQMIEVDSMMITSPEAFSTDEIYKMELKAT HHCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCEEEECCCCCCCCHHEEHHHHHH EKLLQYTKKVQGSLKCAGPGRYVIFTTRGALKEMTASYKTIPSEEEMAHLYDEIVACGIG HHHHHHHHHHCCCEEECCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC IGRTAYEAEIQAGKAFLHAKHCGRGAWMVAFDDGTIAGPLGKGERIRYSLGDEELRQLAS CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCEEEEECCHHHHHHHHH RTSLSAATLGKLQAVLRKRGKNEIEAHELAVYMGILPRSARRILKELEAAGLAEAIGETS HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC PYPRGRPRKVYRIFL CCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA