| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is hisB [H]
Identifier: 138896661
GI number: 138896661
Start: 3119708
End: 3120295
Strand: Reverse
Name: hisB [H]
Synonym: GTNG_3024
Alternate gene names: 138896661
Gene position: 3120295-3119708 (Counterclockwise)
Preceding gene: 138896662
Following gene: 138896660
Centisome position: 87.89
GC content: 52.21
Gene sequence:
>588_bases ATGGCGAGAGAAGCGACGATCGCAAGAACGACGAATGAGACAAGCATTCAGTTGTCGTTTTCGTTGGATGGTGAAGGGAA GGCCGAGCTCGAGACGGGGGTGCCGTTTTTGACTCATATGCTCGATTTGTTTGCCAAACATGGACAGTTTGATTTGCGAG TCGATGCGAAAGGTGATACGCATATTGACGATCACCATACGACTGAAGATATCGGCATTTGCCTCGGACAAGCGATTAAA GAAGCGCTTGGCGACAAAAAAGGAATCAAGCGATACGGCAACGCGTTTGTGCCGATGGATGACGCGTTGGCGCAAGTCGT CATCGATTTAAGCAACCGCCCGCATTTTGAGTTTCGCGGCGAATTTCCGGCGGCCAAAGTCGGCACGTTCGACGTCGAGC TGGTTTATGAGTTTTTATGGAAGCTGGCGCTTGAGGCGCGGATGAACTTGCATGTCATCGTCCATTATGGACGCAATACG CACCATATGATCGAAGCCGTGTTTAAAGCGCTTGGGCGGGCGCTCGATGAAGCGACGATGGTCGACCCGCGCGTCAAAGG CGTCCCGTCGACAAAAGGCATGCTTTGA
Upstream 100 bases:
>100_bases AACACGGCAAGGACATCGCTGCGTTTGCCCGCTTAGAGGGGCTGGAGGCGCATGCGCGCGCCATCGAGGTGCGGTTGAAA AAAGAAAGAGGGGAACGATA
Downstream 100 bases:
>100_bases CGCTGCGCTTGACGTACCATTGATGAAAGGAATGGGATGACGATGATCGGGGTAATCGATTATGGCATGGGCAACTTATA TAGCGTCAGCAAAGCGCTCG
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAREATIARTTNETSIQLSFSLDGEGKAELETGVPFLTHMLDLFAKHGQFDLRVDAKGDTHIDDHHTTEDIGICLGQAIK EALGDKKGIKRYGNAFVPMDDALAQVVIDLSNRPHFEFRGEFPAAKVGTFDVELVYEFLWKLALEARMNLHVIVHYGRNT HHMIEAVFKALGRALDEATMVDPRVKGVPSTKGML
Sequences:
>Translated_195_residues MAREATIARTTNETSIQLSFSLDGEGKAELETGVPFLTHMLDLFAKHGQFDLRVDAKGDTHIDDHHTTEDIGICLGQAIK EALGDKKGIKRYGNAFVPMDDALAQVVIDLSNRPHFEFRGEFPAAKVGTFDVELVYEFLWKLALEARMNLHVIVHYGRNT HHMIEAVFKALGRALDEATMVDPRVKGVPSTKGML >Mature_194_residues AREATIARTTNETSIQLSFSLDGEGKAELETGVPFLTHMLDLFAKHGQFDLRVDAKGDTHIDDHHTTEDIGICLGQAIKE ALGDKKGIKRYGNAFVPMDDALAQVVIDLSNRPHFEFRGEFPAAKVGTFDVELVYEFLWKLALEARMNLHVIVHYGRNTH HMIEAVFKALGRALDEATMVDPRVKGVPSTKGML
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=195, Percent_Identity=45.1282051282051, Blast_Score=171, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6324776, Length=217, Percent_Identity=43.778801843318, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21688; Mature: 21557
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAREATIARTTNETSIQLSFSLDGEGKAELETGVPFLTHMLDLFAKHGQFDLRVDAKGDT CCCCCCEEECCCCCEEEEEEEECCCCCCHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCC HIDDHHTTEDIGICLGQAIKEALGDKKGIKRYGNAFVPMDDALAQVVIDLSNRPHFEFRG CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECC EFPAAKVGTFDVELVYEFLWKLALEARMNLHVIVHYGRNTHHMIEAVFKALGRALDEATM CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH VDPRVKGVPSTKGML CCCCCCCCCCCCCCC >Mature Secondary Structure AREATIARTTNETSIQLSFSLDGEGKAELETGVPFLTHMLDLFAKHGQFDLRVDAKGDT CCCCCEEECCCCCEEEEEEEECCCCCCHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCC HIDDHHTTEDIGICLGQAIKEALGDKKGIKRYGNAFVPMDDALAQVVIDLSNRPHFEFRG CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECC EFPAAKVGTFDVELVYEFLWKLALEARMNLHVIVHYGRNTHHMIEAVFKALGRALDEATM CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH VDPRVKGVPSTKGML CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA