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The map label for this gene is ykaA [H]

Identifier: 138896535

GI number: 138896535

Start: 3005008

End: 3005628

Strand: Reverse

Name: ykaA [H]

Synonym: GTNG_2898

Alternate gene names: 138896535

Gene position: 3005628-3005008 (Counterclockwise)

Preceding gene: 138896536

Following gene: 138896534

Centisome position: 84.66

GC content: 39.61

Gene sequence:

>621_bases
ATGATTTTTTCGCCAAAAAAGGACGTTTTCTTCGACATGTTGTTCACGATCTCCGAAAATGTAAAGGAAGCAGCTCAATA
TTTTGTTGAGTATAAAATTCAAAGTGTGAGCGACTTGAAAGAATTCGCCCGCGTCATGAAGGAGTATGAACGGAAAGGCG
ATTCATACATCCATGAACTCGTCGTTCATTTAAACAAAACGTTTATTACGCCGATTGAGCGGGAAGACATCCACCAATTA
GCAATGAAAATGGATGATGTACTTGATGGCTTCGAGCAATGTTCGGCTCGGTTCGAAATGTTCTCGTTTACGGATATTGA
CGAACATATGGTGAAGTTTTTCGACTACATTTATCAAAGCACGATCGAAATTGTGCATGCCTTAGAGCTGCTTTCGCATA
AAAAATTGCTCGATATGCGTCAACACGCCATTAAGATTAAAGACTATGAAACAAAATGTGACGAAATTTTGCGCGCTTCG
ATCAAAAACTTGTTTGTGACGCAAAAAGATCCGATTAAGCTCATCCAATATAAAGAGCTTTATGAAATGCTTGAAGAGAT
TGCCGATAGCTGTGAAGATGTCGCCAATACGCTTGAAACGATCATCATGCGCAACGCATAA

Upstream 100 bases:

>100_bases
TTCGTGTAAAGTTTCTTATTTGCTTATTGTAAATGAAGTTGAAATTGTTAAAATAGGTAGCGGTGATTTTTTTTGATTCC
AACAATGGAGGGTGTCCGGT

Downstream 100 bases:

>100_bases
AAGGGGACGTTGTTTTCATGGATATGATCCTTGTCTTGACGGTATTAATTGTCGTTTTTGCGCTGGCGTTTGACTTTATT
AACGGCTTCCATGACACAGC

Product: putative Pit accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MIFSPKKDVFFDMLFTISENVKEAAQYFVEYKIQSVSDLKEFARVMKEYERKGDSYIHELVVHLNKTFITPIEREDIHQL
AMKMDDVLDGFEQCSARFEMFSFTDIDEHMVKFFDYIYQSTIEIVHALELLSHKKLLDMRQHAIKIKDYETKCDEILRAS
IKNLFVTQKDPIKLIQYKELYEMLEEIADSCEDVANTLETIIMRNA

Sequences:

>Translated_206_residues
MIFSPKKDVFFDMLFTISENVKEAAQYFVEYKIQSVSDLKEFARVMKEYERKGDSYIHELVVHLNKTFITPIEREDIHQL
AMKMDDVLDGFEQCSARFEMFSFTDIDEHMVKFFDYIYQSTIEIVHALELLSHKKLLDMRQHAIKIKDYETKCDEILRAS
IKNLFVTQKDPIKLIQYKELYEMLEEIADSCEDVANTLETIIMRNA
>Mature_206_residues
MIFSPKKDVFFDMLFTISENVKEAAQYFVEYKIQSVSDLKEFARVMKEYERKGDSYIHELVVHLNKTFITPIEREDIHQL
AMKMDDVLDGFEQCSARFEMFSFTDIDEHMVKFFDYIYQSTIEIVHALELLSHKKLLDMRQHAIKIKDYETKCDEILRAS
IKNLFVTQKDPIKLIQYKELYEMLEEIADSCEDVANTLETIIMRNA

Specific function: Unknown

COG id: COG1392

COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0111 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR018445 [H]

Pfam domain/function: PF01865 PhoU_div [H]

EC number: NA

Molecular weight: Translated: 24482; Mature: 24482

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSPKKDVFFDMLFTISENVKEAAQYFVEYKIQSVSDLKEFARVMKEYERKGDSYIHEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVHLNKTFITPIEREDIHQLAMKMDDVLDGFEQCSARFEMFSFTDIDEHMVKFFDYIYQS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TIEIVHALELLSHKKLLDMRQHAIKIKDYETKCDEILRASIKNLFVTQKDPIKLIQYKEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YEMLEEIADSCEDVANTLETIIMRNA
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFSPKKDVFFDMLFTISENVKEAAQYFVEYKIQSVSDLKEFARVMKEYERKGDSYIHEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVHLNKTFITPIEREDIHQLAMKMDDVLDGFEQCSARFEMFSFTDIDEHMVKFFDYIYQS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TIEIVHALELLSHKKLLDMRQHAIKIKDYETKCDEILRASIKNLFVTQKDPIKLIQYKEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YEMLEEIADSCEDVANTLETIIMRNA
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]