| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is ysnB [H]
Identifier: 138896229
GI number: 138896229
Start: 2702113
End: 2702658
Strand: Reverse
Name: ysnB [H]
Synonym: GTNG_2592
Alternate gene names: 138896229
Gene position: 2702658-2702113 (Counterclockwise)
Preceding gene: 138896230
Following gene: 138896228
Centisome position: 76.12
GC content: 53.11
Gene sequence:
>546_bases ATGGGACGAGATCATGGGCGAAAAGGGGCGGACGGAATGAACGTCGTCATTGTCAGTGACAGCCACGGGCTGACTGCCGA ACTCGCTCAAATTGTGTCGCGTCATCGCCATGAAGCGGATTTGTTCATTCATTGCGGTGATTCCGAGCTGCCGGCGGAAG CGGATGAGCTTGCTCCGTTTGTAGTCGTGCGCGGCAATTGTGATTGGAAAGCCGCGTTTCCCGATGAGCGGATCGAGGAG GCGGATGGCGTCCGCTTCTTTGTCACCCACGGCCATTTATACGGCGTGAAAACGTCGCTTTTACGTTTATACTACCGGGC GAAAGAAACAGAAGCCAACGTCGTTTGCTTCGGCCACTCCCACCTTGCCGGTGTTGAGCAAATCAATGGGATGTTGTTCA TCAATCCCGGCAGCATCGCCTTGCCGCGGGGAAGAAAAGAAAAAACATATGCGGTGCTGACGATTGACAAAGACCAGGCC TTTGTTCAATTTTATGATGTCACAGGTCATCCAATCCCCGGCTTGGCACAAACGTTTTCCTTCTAG
Upstream 100 bases:
>100_bases TTTATCTTCCGGAGCGTGGGAAAACGATGGCTGAGCTCACGCCAGAAGAGAAAAATGCCATCAGCCATCGAGCGAAGGCG CTGGAGAAGTTAAATGAGCA
Downstream 100 bases:
>100_bases GCGGACAAATGTCCGCTTTTTTTATGCATTCGTGCCCCTTCCTCCTCTCCAACTCCCCCGATTTGTTGCGAGAAGAAAAA ATTTTTTTAAAATCAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MGRDHGRKGADGMNVVIVSDSHGLTAELAQIVSRHRHEADLFIHCGDSELPAEADELAPFVVVRGNCDWKAAFPDERIEE ADGVRFFVTHGHLYGVKTSLLRLYYRAKETEANVVCFGHSHLAGVEQINGMLFINPGSIALPRGRKEKTYAVLTIDKDQA FVQFYDVTGHPIPGLAQTFSF
Sequences:
>Translated_181_residues MGRDHGRKGADGMNVVIVSDSHGLTAELAQIVSRHRHEADLFIHCGDSELPAEADELAPFVVVRGNCDWKAAFPDERIEE ADGVRFFVTHGHLYGVKTSLLRLYYRAKETEANVVCFGHSHLAGVEQINGMLFINPGSIALPRGRKEKTYAVLTIDKDQA FVQFYDVTGHPIPGLAQTFSF >Mature_180_residues GRDHGRKGADGMNVVIVSDSHGLTAELAQIVSRHRHEADLFIHCGDSELPAEADELAPFVVVRGNCDWKAAFPDERIEEA DGVRFFVTHGHLYGVKTSLLRLYYRAKETEANVVCFGHSHLAGVEQINGMLFINPGSIALPRGRKEKTYAVLTIDKDQAF VQFYDVTGHPIPGLAQTFSF
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR020935 - InterPro: IPR000979 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 20023; Mature: 19892
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRDHGRKGADGMNVVIVSDSHGLTAELAQIVSRHRHEADLFIHCGDSELPAEADELAPF CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCE VVVRGNCDWKAAFPDERIEEADGVRFFVTHGHLYGVKTSLLRLYYRAKETEANVVCFGHS EEEECCCCEEECCCHHHHHHCCCEEEEEECCEEEHHHHHHHHHHHHCCCCCCCEEEECCC HLAGVEQINGMLFINPGSIALPRGRKEKTYAVLTIDKDQAFVQFYDVTGHPIPGLAQTFS HHCCHHHHCCEEEECCCCEECCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCHHHHCC F C >Mature Secondary Structure GRDHGRKGADGMNVVIVSDSHGLTAELAQIVSRHRHEADLFIHCGDSELPAEADELAPF CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCE VVVRGNCDWKAAFPDERIEEADGVRFFVTHGHLYGVKTSLLRLYYRAKETEANVVCFGHS EEEECCCCEEECCCHHHHHHCCCEEEEEECCEEEHHHHHHHHHHHHCCCCCCCEEEECCC HLAGVEQINGMLFINPGSIALPRGRKEKTYAVLTIDKDQAFVQFYDVTGHPIPGLAQTFS HHCCHHHHCCEEEECCCCEECCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCHHHHCC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377 [H]