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The map label for this gene is ysoA [H]

Identifier: 138896220

GI number: 138896220

Start: 2691158

End: 2692141

Strand: Reverse

Name: ysoA [H]

Synonym: GTNG_2583

Alternate gene names: 138896220

Gene position: 2692141-2691158 (Counterclockwise)

Preceding gene: 229577455

Following gene: 138896219

Centisome position: 75.83

GC content: 51.93

Gene sequence:

>984_bases
ATGGGGAACGGAAAAAAAGGAAAAATCATTATGTTTCCACAAACGAAAGAACGGCTGATCGAAGCGGCGTTCACAGCACT
CGAGGCGAAGCAGTACAAGGAAGCACTCCGTTTTTTGCGTGCCGCCGAACAGCTTGGTGACGGCAGCTTTCCGATCCGGC
TCGGGCTTGCGGTTTGCTGCTACGAGCTGGGAGATTACGATGAGGCGGAATGGCGCCTGGCCGCATTGCTTGATGAACAA
CCGAACAATGGCGAACTGTTGCAAATGTATGTTGCCCTGCTGTTACAGACGAACCGATATCGGGAGGCGGAAACGTTCAT
CCGCTCCGCTTTGCGTCGCCAGACACTGCCAGTTTCATTGCGTGAACAGCTTCGCCAGCTGCTCCGATTCAGTGAAAAAA
TGAACGTCCGCCCATTGCCGCCCGCGGAATGGAAGCGGGTGAAACGGTTGCTTGAATCGGAGGATATCGCCGAGCAAATG
CAGCTCATTAAACAGCTGGAAAAAGAAGATATCGCTCCAGTACTGTCACTGTTGAGTCAATATTTAAGTGAACCGAAAAA
AAGCCCGATAGCAAAAACGATGTTGCTTCGGCTTCTGACGGTGAAACAGATTGATGAGACAGTGACGGTTGAGAAGTTTG
GCCAGCGTATCGATGTCGTCCCATCTGCATTAAACGAACAAGCGGAAACGGAATTCGCTTCAACGCTGTTGCGCCTGCTT
GAGCAGCGACTTACGGCGGAGAGCCCGAGCTTGTATGAAACGGCGGCGGAAATATGGCTTCGCTATGCGTACATCTTGTA
TCCGTTCCCGCCAGAGCCGGCCGATGCCGACGTATGGCTTGCTGCCCTTCATTGGATGGCAAGCCGACTTCAAGGTATGG
ACGCTGATATGAGTATGTTGGCTGCCCGCTACGGTGTAGCGGTGGAGGAGATGGCGAAGCTTTGCAAAAAGTTGAACGAA
ATAGAGAAACTTTCCTACCTCTAA

Upstream 100 bases:

>100_bases
ACAGTAGAGGGATGAGTGGGCTGTCATGATGTTGCTGCGGCTTGTTCGCCAGGGAAAAACTTGCTACACTTGTGGTAAAT
GCAAATAGGAGCAGGCAAAG

Downstream 100 bases:

>100_bases
TGGATGGTTCTGTATTGAAACATAGCTTTTGTATGTTATAATATAATGGCTGTGCTATGTATCTGTTTTCGCATACTTGG
CTACATAATATGGACATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MGNGKKGKIIMFPQTKERLIEAAFTALEAKQYKEALRFLRAAEQLGDGSFPIRLGLAVCCYELGDYDEAEWRLAALLDEQ
PNNGELLQMYVALLLQTNRYREAETFIRSALRRQTLPVSLREQLRQLLRFSEKMNVRPLPPAEWKRVKRLLESEDIAEQM
QLIKQLEKEDIAPVLSLLSQYLSEPKKSPIAKTMLLRLLTVKQIDETVTVEKFGQRIDVVPSALNEQAETEFASTLLRLL
EQRLTAESPSLYETAAEIWLRYAYILYPFPPEPADADVWLAALHWMASRLQGMDADMSMLAARYGVAVEEMAKLCKKLNE
IEKLSYL

Sequences:

>Translated_327_residues
MGNGKKGKIIMFPQTKERLIEAAFTALEAKQYKEALRFLRAAEQLGDGSFPIRLGLAVCCYELGDYDEAEWRLAALLDEQ
PNNGELLQMYVALLLQTNRYREAETFIRSALRRQTLPVSLREQLRQLLRFSEKMNVRPLPPAEWKRVKRLLESEDIAEQM
QLIKQLEKEDIAPVLSLLSQYLSEPKKSPIAKTMLLRLLTVKQIDETVTVEKFGQRIDVVPSALNEQAETEFASTLLRLL
EQRLTAESPSLYETAAEIWLRYAYILYPFPPEPADADVWLAALHWMASRLQGMDADMSMLAARYGVAVEEMAKLCKKLNE
IEKLSYL
>Mature_326_residues
GNGKKGKIIMFPQTKERLIEAAFTALEAKQYKEALRFLRAAEQLGDGSFPIRLGLAVCCYELGDYDEAEWRLAALLDEQP
NNGELLQMYVALLLQTNRYREAETFIRSALRRQTLPVSLREQLRQLLRFSEKMNVRPLPPAEWKRVKRLLESEDIAEQMQ
LIKQLEKEDIAPVLSLLSQYLSEPKKSPIAKTMLLRLLTVKQIDETVTVEKFGQRIDVVPSALNEQAETEFASTLLRLLE
QRLTAESPSLYETAAEIWLRYAYILYPFPPEPADADVWLAALHWMASRLQGMDADMSMLAARYGVAVEEMAKLCKKLNEI
EKLSYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006822
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF04733 Coatomer_E [H]

EC number: NA

Molecular weight: Translated: 37516; Mature: 37385

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNGKKGKIIMFPQTKERLIEAAFTALEAKQYKEALRFLRAAEQLGDGSFPIRLGLAVCC
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YELGDYDEAEWRLAALLDEQPNNGELLQMYVALLLQTNRYREAETFIRSALRRQTLPVSL
HHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
REQLRQLLRFSEKMNVRPLPPAEWKRVKRLLESEDIAEQMQLIKQLEKEDIAPVLSLLSQ
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLSEPKKSPIAKTMLLRLLTVKQIDETVTVEKFGQRIDVVPSALNEQAETEFASTLLRLL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQRLTAESPSLYETAAEIWLRYAYILYPFPPEPADADVWLAALHWMASRLQGMDADMSML
HHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
AARYGVAVEEMAKLCKKLNEIEKLSYL
HHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNGKKGKIIMFPQTKERLIEAAFTALEAKQYKEALRFLRAAEQLGDGSFPIRLGLAVCC
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YELGDYDEAEWRLAALLDEQPNNGELLQMYVALLLQTNRYREAETFIRSALRRQTLPVSL
HHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
REQLRQLLRFSEKMNVRPLPPAEWKRVKRLLESEDIAEQMQLIKQLEKEDIAPVLSLLSQ
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLSEPKKSPIAKTMLLRLLTVKQIDETVTVEKFGQRIDVVPSALNEQAETEFASTLLRLL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQRLTAESPSLYETAAEIWLRYAYILYPFPPEPADADVWLAALHWMASRLQGMDADMSML
HHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
AARYGVAVEEMAKLCKKLNEIEKLSYL
HHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]