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The map label for this gene is ydfM [H]

Identifier: 138896149

GI number: 138896149

Start: 2617626

End: 2618534

Strand: Reverse

Name: ydfM [H]

Synonym: GTNG_2512

Alternate gene names: 138896149

Gene position: 2618534-2617626 (Counterclockwise)

Preceding gene: 138896150

Following gene: 138896148

Centisome position: 73.75

GC content: 53.91

Gene sequence:

>909_bases
ATGGCCATGGAAAACGAACAGCGATTCAGGCAGGCGAAAACAGCAGCGATCATTGGCATTGTCGGCAACATAGCGCTTGC
CGCCATCAAGGCAATCGTTGGGGTGTGGAGCCAAAGTCAGGCACTGATCGCCGATGCCGCTCATTCGGCATCCGATGTTG
CTGGATCGTTCGCCGTTTGGATCGGACTGCGAGCCGCGGCGCGCCCGCCGGATGAAGACCATCCGTACGGGCACGGAAAA
GCGGAATCGATCGCTGCCATTATTGTGGCGGTCCTTTTGTTTCTTGTTGGGCTCGAGATCGGACGATCAGCGCTCATGTC
GTTTTTCGCCCCACTGTCGCCACCGGGGATGGCGGCCATTTATGTTCTGTTGTTATCGATCGTTGTCAAAGAGGCGATGT
TTCGCTATAAATACCGGCTAGGGAAACAGCTCAATAGCGATGCCTTAGTTGTCAACGCCTATGAACATCGCTCTGACGTC
TTCTCTTCGCTTGCTGCGCTCGTTGGTGTTGGTGCTGCCATTCTCGGCGGAAAGTGGGAAATCGGCTGGCTCGTGTATGC
CGACCCTCTCGCTGGGCTGTTCGTCGCCATTCTTGTTTTAAAAATAGCGTGGGAGCTTGGTCGGAAGTCGATCCATACGG
CAATCGACCACGTGCTCCATGAGGAGGAAACGGGCTATTTGCGGGAGGCGGTGCTGTCGGTTCCTGACGTGCGGCAAATT
AACGAGCTATATGCGCGCGAGCATGGTCATTACGTTATTGTCGATTTGAAGATCGCCGTTGATCCACGGCTGACAGTCGA
AGAAGGACACCGGATTGGGAAAAAAGTAAAGGAAAAGTTGCTGACACTTCCGCGCGTCCGCAATGTGATGGTGCATATCA
ATCCGTATGATCCGCAAAAAAACACGTAA

Upstream 100 bases:

>100_bases
TTTTTCTTTTAACGACGATGCTTGGAACGGAAAATGGATACACTAATGGCCAGATGAAACATAAACGGCTGGGATGCTGC
TAGACGTGAAGTGGGGGAAG

Downstream 100 bases:

>100_bases
TGTCGTTGCCTGCCCTTTTCTCCTTTTTGTATAATAAGGAGAGTTGAGGTGGGGGACATGTTAAAAGCGAAAACGCGTTG
GGAAGTAGATTGCCCCGACG

Product: cation efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MAMENEQRFRQAKTAAIIGIVGNIALAAIKAIVGVWSQSQALIADAAHSASDVAGSFAVWIGLRAAARPPDEDHPYGHGK
AESIAAIIVAVLLFLVGLEIGRSALMSFFAPLSPPGMAAIYVLLLSIVVKEAMFRYKYRLGKQLNSDALVVNAYEHRSDV
FSSLAALVGVGAAILGGKWEIGWLVYADPLAGLFVAILVLKIAWELGRKSIHTAIDHVLHEEETGYLREAVLSVPDVRQI
NELYAREHGHYVIVDLKIAVDPRLTVEEGHRIGKKVKEKLLTLPRVRNVMVHINPYDPQKNT

Sequences:

>Translated_302_residues
MAMENEQRFRQAKTAAIIGIVGNIALAAIKAIVGVWSQSQALIADAAHSASDVAGSFAVWIGLRAAARPPDEDHPYGHGK
AESIAAIIVAVLLFLVGLEIGRSALMSFFAPLSPPGMAAIYVLLLSIVVKEAMFRYKYRLGKQLNSDALVVNAYEHRSDV
FSSLAALVGVGAAILGGKWEIGWLVYADPLAGLFVAILVLKIAWELGRKSIHTAIDHVLHEEETGYLREAVLSVPDVRQI
NELYAREHGHYVIVDLKIAVDPRLTVEEGHRIGKKVKEKLLTLPRVRNVMVHINPYDPQKNT
>Mature_301_residues
AMENEQRFRQAKTAAIIGIVGNIALAAIKAIVGVWSQSQALIADAAHSASDVAGSFAVWIGLRAAARPPDEDHPYGHGKA
ESIAAIIVAVLLFLVGLEIGRSALMSFFAPLSPPGMAAIYVLLLSIVVKEAMFRYKYRLGKQLNSDALVVNAYEHRSDVF
SSLAALVGVGAAILGGKWEIGWLVYADPLAGLFVAILVLKIAWELGRKSIHTAIDHVLHEEETGYLREAVLSVPDVRQIN
ELYAREHGHYVIVDLKIAVDPRLTVEEGHRIGKKVKEKLLTLPRVRNVMVHINPYDPQKNT

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=277, Percent_Identity=24.5487364620939, Blast_Score=89, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI115533506, Length=281, Percent_Identity=23.4875444839858, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115533508, Length=281, Percent_Identity=23.4875444839858, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6325032, Length=236, Percent_Identity=28.8135593220339, Blast_Score=107, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6323831, Length=238, Percent_Identity=29.8319327731092, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32962; Mature: 32831

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMENEQRFRQAKTAAIIGIVGNIALAAIKAIVGVWSQSQALIADAAHSASDVAGSFAVW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IGLRAAARPPDEDHPYGHGKAESIAAIIVAVLLFLVGLEIGRSALMSFFAPLSPPGMAAI
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YVLLLSIVVKEAMFRYKYRLGKQLNSDALVVNAYEHRSDVFSSLAALVGVGAAILGGKWE
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IGWLVYADPLAGLFVAILVLKIAWELGRKSIHTAIDHVLHEEETGYLREAVLSVPDVRQI
EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
NELYAREHGHYVIVDLKIAVDPRLTVEEGHRIGKKVKEKLLTLPRVRNVMVHINPYDPQK
HHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC
NT
CC
>Mature Secondary Structure 
AMENEQRFRQAKTAAIIGIVGNIALAAIKAIVGVWSQSQALIADAAHSASDVAGSFAVW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IGLRAAARPPDEDHPYGHGKAESIAAIIVAVLLFLVGLEIGRSALMSFFAPLSPPGMAAI
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YVLLLSIVVKEAMFRYKYRLGKQLNSDALVVNAYEHRSDVFSSLAALVGVGAAILGGKWE
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IGWLVYADPLAGLFVAILVLKIAWELGRKSIHTAIDHVLHEEETGYLREAVLSVPDVRQI
EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
NELYAREHGHYVIVDLKIAVDPRLTVEEGHRIGKKVKEKLLTLPRVRNVMVHINPYDPQK
HHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC
NT
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]