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The map label for this gene is ahpF [H]

Identifier: 138896142

GI number: 138896142

Start: 2609162

End: 2610685

Strand: Reverse

Name: ahpF [H]

Synonym: GTNG_2505

Alternate gene names: 138896142

Gene position: 2610685-2609162 (Counterclockwise)

Preceding gene: 138896143

Following gene: 138896141

Centisome position: 73.53

GC content: 51.57

Gene sequence:

>1524_bases
ATGCTTGATGCTGACATCAAGGCACAACTCGCCCAGTACTTGCAATTGCTTGAAAATGACATTGTCTTGACAGTAAGCGC
GGGAGACGACAACGTTTCCCGCGATATGCTTGCTTTAATCGATGAATTAACGGCGATGTCGCCAAAAATCAAAGTGGAAA
AAGCAACGCTTGAACGAACGCCAAGCTTCAGCGTCAGCCGGGTCGGCGAAAACACCGGCGTCACCTTTGCTGGCGTTCCG
TTAGGCCATGAGTTTACGTCTTTGGTGCTTGCCCTGCTTCAAGTGAGCGGGCGGCCGCCAAAAGTCAGCGAGGATGTGGT
GCGCCGCATTCAACAAATTCGGGGCAAACATCATTTTGAAACGTACGTGAGCTTAACGTGCCATAACTGCCCGGATGTCG
TTCAAGCGCTCAACATCATGAGCGTGCTCAACCCTGACATTTCGCATACGATGATTGATGGTGCGGCGTTTAAGGAAGAA
GTTGAACAAAAAGGCATTATGGCGGTGCCGACCGTCTTTTTAAACGGCGAGATGTTCGCTAGCGGCCGCATGTCGCTTGA
AGACATTCTCGCAAAATTAGGAAGCGAGCCGGACGCTGCTTCATTTGCCGATAAAGACCCGTTTGATGTGCTTGTCATCG
GCGGCGGACCAGCGGGTGCGACAGCTGCCATTTATGCGGCGCGCAAAGGCATCCGCACCGGTATTGTCGCTGAGCGCTTC
GGCGGACAAATTTTAGATACGCTCGGTATTGAGAACTTCATCAGCGTCAAATATACCGAAGGGCCGAAGCTGGCAGCCAG
CATTGAGGAGCATGTCAAACAGTACGATGTCGACATCATGATCCAGCGTGCCAAACGGCTCGAGAAGAAAGATCTTATTG
AAGTCGAGCTGGAAAACGGTGCTGTCCTGAAAAGCAAAACGGTGGTTATTTCCACTGGCGCACGTTGGCGCAATCTCGGT
GTGCCGGGTGAGGAAGAGTTCAAAAACAAAGGGGTTGCCTACTGCCCGCATTGCGACGGCCCGCTGTTTGAAGGCAAGCA
CGTGGCGGTCATTGGCGGCGGTAACTCCGGCGTAGAAGCGGCGATTGACCTCGCTGGCATCGCTAAACATGTGACTGTGC
TCGAGTTCGCTCCTGAATTAAAAGCGGATGCTGTTTTGCAGGAGCGATTGTATAGCTTGCCGAACGTGACGGTCATTAAA
AATGCGCAAACGAAAGAAATTACCGGTACAGACAAAGTGAATGGCCTTACGTATATCGATCGCGAAACAGGGGAAGAGCA
CCATATCGAGTTGCAAGGTGTATTCGTTCAAATCGGACTTGTGCCGAATACAGAGTGGCTGGAAGGAACGGTTGAACGGA
ATCGCATCGGCGAAATCATCGTCGATAAACGCGGCGCGACAAATGTTGAAGGCGTCTTTGCCGCGGGCGATTGCACGGAC
AGCGCTTATAAGCAAATCATTATTTCCATGGGTTCAGGCGCTACTGCCGCATTGAGTGCGTTTGATTACTTAATTCGCCA
CTAA

Upstream 100 bases:

>100_bases
ACCATCCAGGTGAAGTGTGCCCGGCGAAATGGCAAGAAGGTGCTGAAACGCTGAAACCGAGTCTTGACCTTGTTGGCAAA
ATTTAAGGAGGCATTTGACA

Downstream 100 bases:

>100_bases
AAAGAGAGCCGAAAACGGCTCTCTTTTTACAAATGCCCATTCATGCATGATATCAATCAGACGCAGGCAAAGAGCTGTTT
CACAGCAAAGACAACTTGAC

Product: Alkyl hydroperoxide reductase subunit F

Products: NA

Alternate protein names: Alkyl hydroperoxide reductase [H]

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MLDADIKAQLAQYLQLLENDIVLTVSAGDDNVSRDMLALIDELTAMSPKIKVEKATLERTPSFSVSRVGENTGVTFAGVP
LGHEFTSLVLALLQVSGRPPKVSEDVVRRIQQIRGKHHFETYVSLTCHNCPDVVQALNIMSVLNPDISHTMIDGAAFKEE
VEQKGIMAVPTVFLNGEMFASGRMSLEDILAKLGSEPDAASFADKDPFDVLVIGGGPAGATAAIYAARKGIRTGIVAERF
GGQILDTLGIENFISVKYTEGPKLAASIEEHVKQYDVDIMIQRAKRLEKKDLIEVELENGAVLKSKTVVISTGARWRNLG
VPGEEEFKNKGVAYCPHCDGPLFEGKHVAVIGGGNSGVEAAIDLAGIAKHVTVLEFAPELKADAVLQERLYSLPNVTVIK
NAQTKEITGTDKVNGLTYIDRETGEEHHIELQGVFVQIGLVPNTEWLEGTVERNRIGEIIVDKRGATNVEGVFAAGDCTD
SAYKQIIISMGSGATAALSAFDYLIRH

Sequences:

>Translated_507_residues
MLDADIKAQLAQYLQLLENDIVLTVSAGDDNVSRDMLALIDELTAMSPKIKVEKATLERTPSFSVSRVGENTGVTFAGVP
LGHEFTSLVLALLQVSGRPPKVSEDVVRRIQQIRGKHHFETYVSLTCHNCPDVVQALNIMSVLNPDISHTMIDGAAFKEE
VEQKGIMAVPTVFLNGEMFASGRMSLEDILAKLGSEPDAASFADKDPFDVLVIGGGPAGATAAIYAARKGIRTGIVAERF
GGQILDTLGIENFISVKYTEGPKLAASIEEHVKQYDVDIMIQRAKRLEKKDLIEVELENGAVLKSKTVVISTGARWRNLG
VPGEEEFKNKGVAYCPHCDGPLFEGKHVAVIGGGNSGVEAAIDLAGIAKHVTVLEFAPELKADAVLQERLYSLPNVTVIK
NAQTKEITGTDKVNGLTYIDRETGEEHHIELQGVFVQIGLVPNTEWLEGTVERNRIGEIIVDKRGATNVEGVFAAGDCTD
SAYKQIIISMGSGATAALSAFDYLIRH
>Mature_507_residues
MLDADIKAQLAQYLQLLENDIVLTVSAGDDNVSRDMLALIDELTAMSPKIKVEKATLERTPSFSVSRVGENTGVTFAGVP
LGHEFTSLVLALLQVSGRPPKVSEDVVRRIQQIRGKHHFETYVSLTCHNCPDVVQALNIMSVLNPDISHTMIDGAAFKEE
VEQKGIMAVPTVFLNGEMFASGRMSLEDILAKLGSEPDAASFADKDPFDVLVIGGGPAGATAAIYAARKGIRTGIVAERF
GGQILDTLGIENFISVKYTEGPKLAASIEEHVKQYDVDIMIQRAKRLEKKDLIEVELENGAVLKSKTVVISTGARWRNLG
VPGEEEFKNKGVAYCPHCDGPLFEGKHVAVIGGGNSGVEAAIDLAGIAKHVTVLEFAPELKADAVLQERLYSLPNVTVIK
NAQTKEITGTDKVNGLTYIDRETGEEHHIELQGVFVQIGLVPNTEWLEGTVERNRIGEIIVDKRGATNVEGVFAAGDCTD
SAYKQIIISMGSGATAALSAFDYLIRH

Specific function: Transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone [H]

COG id: COG3634

COG function: function code O; Alkyl hydroperoxide reductase, large subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI87081763, Length=517, Percent_Identity=57.6402321083172, Blast_Score=577, Evalue=1e-166,
Organism=Escherichia coli, GI1787114, Length=307, Percent_Identity=34.5276872964169, Blast_Score=157, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6321898, Length=313, Percent_Identity=33.5463258785943, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6320560, Length=310, Percent_Identity=33.8709677419355, Blast_Score=145, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012081
- InterPro:   IPR013027
- InterPro:   IPR002109
- InterPro:   IPR008255
- InterPro:   IPR001327
- InterPro:   IPR000103
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.6.99.3 [H]

Molecular weight: Translated: 54748; Mature: 54748

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00573 PYRIDINE_REDOX_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDADIKAQLAQYLQLLENDIVLTVSAGDDNVSRDMLALIDELTAMSPKIKVEKATLERT
CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHCC
PSFSVSRVGENTGVTFAGVPLGHEFTSLVLALLQVSGRPPKVSEDVVRRIQQIRGKHHFE
CCCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEE
TYVSLTCHNCPDVVQALNIMSVLNPDISHTMIDGAAFKEEVEQKGIMAVPTVFLNGEMFA
EEEEEEECCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCEEECEEEECCEEEE
SGRMSLEDILAKLGSEPDAASFADKDPFDVLVIGGGPAGATAAIYAARKGIRTGIVAERF
CCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHCHHHHHH
GGQILDTLGIENFISVKYTEGPKLAASIEEHVKQYDVDIMIQRAKRLEKKDLIEVELENG
CCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
AVLKSKTVVISTGARWRNLGVPGEEEFKNKGVAYCPHCDGPLFEGKHVAVIGGGNSGVEA
EEEEECEEEEECCCCEECCCCCCHHHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCHHH
AIDLAGIAKHVTVLEFAPELKADAVLQERLYSLPNVTVIKNAQTKEITGTDKVNGLTYID
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEE
RETGEEHHIELQGVFVQIGLVPNTEWLEGTVERNRIGEIIVDKRGATNVEGVFAAGDCTD
CCCCCCEEEEEEEEEEEEEECCCCHHHHCCHHHCCCCEEEEECCCCCCCCEEEEECCCCH
SAYKQIIISMGSGATAALSAFDYLIRH
HHHHHEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDADIKAQLAQYLQLLENDIVLTVSAGDDNVSRDMLALIDELTAMSPKIKVEKATLERT
CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHCC
PSFSVSRVGENTGVTFAGVPLGHEFTSLVLALLQVSGRPPKVSEDVVRRIQQIRGKHHFE
CCCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEE
TYVSLTCHNCPDVVQALNIMSVLNPDISHTMIDGAAFKEEVEQKGIMAVPTVFLNGEMFA
EEEEEEECCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCEEECEEEECCEEEE
SGRMSLEDILAKLGSEPDAASFADKDPFDVLVIGGGPAGATAAIYAARKGIRTGIVAERF
CCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHCHHHHHH
GGQILDTLGIENFISVKYTEGPKLAASIEEHVKQYDVDIMIQRAKRLEKKDLIEVELENG
CCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
AVLKSKTVVISTGARWRNLGVPGEEEFKNKGVAYCPHCDGPLFEGKHVAVIGGGNSGVEA
EEEEECEEEEECCCCEECCCCCCHHHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCHHH
AIDLAGIAKHVTVLEFAPELKADAVLQERLYSLPNVTVIKNAQTKEITGTDKVNGLTYID
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEE
RETGEEHHIELQGVFVQIGLVPNTEWLEGTVERNRIGEIIVDKRGATNVEGVFAAGDCTD
CCCCCCEEEEEEEEEEEEEECCCCHHHHCCHHHCCCCEEEEECCCCCCCCEEEEECCCCH
SAYKQIIISMGSGATAALSAFDYLIRH
HHHHHEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 8125345; 8180695 [H]