| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is uxuB [H]
Identifier: 138895419
GI number: 138895419
Start: 1864569
End: 1865414
Strand: Reverse
Name: uxuB [H]
Synonym: GTNG_1763
Alternate gene names: 138895419
Gene position: 1865414-1864569 (Counterclockwise)
Preceding gene: 138895420
Following gene: 138895418
Centisome position: 52.54
GC content: 47.52
Gene sequence:
>846_bases ATGCTCCCAATCCATCCAAGTTTAAAAGGAAAAGTAGCGGTCGTCACAGGTGGAGGTGGGGTGCTATGCAGCTGCATGGC AAAAGAGCTTGCCCGCCAAGGGATGAAAGTAGTGATTTTAAATCGTACATTGGAGAAAGCGGAAAAAGTCAAGAATGAGA TTGTTGAACAAGGGGGAGAGGCGTTAGCCATTCAATGTGATGTACTTGATGCCGGTCGTGTCAGGCAGGCTGCGGAGACA GTGGCAGAAGTATACGGACCTTGCGATGTTTTGATTAACGGAGCGGGTGGCAACCATCCACAAGGGATAACGACAAAGGA AATATTGGAGCCACACGATCTTGAAAATCGAGAGATGACAACGTTTTTTGACTTAACGGCAAAAGGGTTTTCTTATGTTT TTGACTTAAATATTCTTGGGACCATCATTCCGACGCAACAATTTCTGAAACAGATGATCGGTAGGGGAGGGACTATCATC AATATTTCCTCGATGAGCGCCCCAAGGCCGATGACGAAAGTGCCGGCATACAGCGCAGCTAAAGCGGGGATCGAAAACTT CACGAAATGGCTGGCTGTACACGTGGCCGAAGTTGGAGTTCGTGTCAATGCGATCGCGCCAGGTTTCTTTTTAACGAAGC AGAACGAACATCTTCTCAAACGCTCAGATGGATCGTATACAGAACGAACAGAGAAAATTTTATCCCATACACCGATGAAG CGGTTAGGCAAACCGGAAGATTTATTGGGGACACTTCTTTGGCTGGTAGATTCTCAGACAAGCGGGTTTGTCACTGGGGC GGTTGTTCCTGTTGACGGCGGCTTTTTGGCTTATGCCGGAGTTTGA
Upstream 100 bases:
>100_bases CGGGCTATGGACTGTATGATCGGGCGCTTGGCATTATGTACTTGTTAGGTATTTGGGATAGTTTGGAAAATGAGAAAAGA AAACGGGAAGGAGACAAAAC
Downstream 100 bases:
>100_bases AGGGAGAATAAACAAAGTCTCCCTTCTTTTTTTGTCTTATGATATACTAATTTTAAAAGAAATCAAAGGTGGATGAGTTA TGCGTACCGGTTTGGTGGAT
Product: D-mannonate oxidoreductase
Products: @DEHY06.txt*3-Dehydro-2- Deoxy-D-Gluconate!; NADH. [C]
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MLPIHPSLKGKVAVVTGGGGVLCSCMAKELARQGMKVVILNRTLEKAEKVKNEIVEQGGEALAIQCDVLDAGRVRQAAET VAEVYGPCDVLINGAGGNHPQGITTKEILEPHDLENREMTTFFDLTAKGFSYVFDLNILGTIIPTQQFLKQMIGRGGTII NISSMSAPRPMTKVPAYSAAKAGIENFTKWLAVHVAEVGVRVNAIAPGFFLTKQNEHLLKRSDGSYTERTEKILSHTPMK RLGKPEDLLGTLLWLVDSQTSGFVTGAVVPVDGGFLAYAGV
Sequences:
>Translated_281_residues MLPIHPSLKGKVAVVTGGGGVLCSCMAKELARQGMKVVILNRTLEKAEKVKNEIVEQGGEALAIQCDVLDAGRVRQAAET VAEVYGPCDVLINGAGGNHPQGITTKEILEPHDLENREMTTFFDLTAKGFSYVFDLNILGTIIPTQQFLKQMIGRGGTII NISSMSAPRPMTKVPAYSAAKAGIENFTKWLAVHVAEVGVRVNAIAPGFFLTKQNEHLLKRSDGSYTERTEKILSHTPMK RLGKPEDLLGTLLWLVDSQTSGFVTGAVVPVDGGFLAYAGV >Mature_281_residues MLPIHPSLKGKVAVVTGGGGVLCSCMAKELARQGMKVVILNRTLEKAEKVKNEIVEQGGEALAIQCDVLDAGRVRQAAET VAEVYGPCDVLINGAGGNHPQGITTKEILEPHDLENREMTTFFDLTAKGFSYVFDLNILGTIIPTQQFLKQMIGRGGTII NISSMSAPRPMTKVPAYSAAKAGIENFTKWLAVHVAEVGVRVNAIAPGFFLTKQNEHLLKRSDGSYTERTEKILSHTPMK RLGKPEDLLGTLLWLVDSQTSGFVTGAVVPVDGGFLAYAGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=278, Percent_Identity=28.4172661870504, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI31542939, Length=269, Percent_Identity=30.4832713754647, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI40254992, Length=266, Percent_Identity=27.4436090225564, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI32483357, Length=271, Percent_Identity=26.9372693726937, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI7705925, Length=272, Percent_Identity=26.4705882352941, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI4503301, Length=277, Percent_Identity=31.0469314079422, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI10190704, Length=271, Percent_Identity=27.6752767527675, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI15277342, Length=279, Percent_Identity=27.2401433691756, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI224922801, Length=184, Percent_Identity=32.0652173913043, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI5031737, Length=275, Percent_Identity=26.5454545454545, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI59889578, Length=247, Percent_Identity=27.1255060728745, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI126723750, Length=271, Percent_Identity=25.830258302583, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI4758504, Length=276, Percent_Identity=29.3478260869565, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI109715829, Length=259, Percent_Identity=24.7104247104247, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI66933014, Length=270, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI33667109, Length=208, Percent_Identity=26.9230769230769, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1789208, Length=273, Percent_Identity=32.967032967033, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1787905, Length=268, Percent_Identity=29.1044776119403, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1790717, Length=273, Percent_Identity=28.2051282051282, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI87082100, Length=275, Percent_Identity=30.9090909090909, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI2367175, Length=270, Percent_Identity=28.8888888888889, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI87082160, Length=271, Percent_Identity=29.8892988929889, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1789378, Length=269, Percent_Identity=31.9702602230483, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1788459, Length=269, Percent_Identity=27.5092936802974, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787335, Length=270, Percent_Identity=27.7777777777778, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1789057, Length=273, Percent_Identity=27.1062271062271, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI2367365, Length=270, Percent_Identity=24.8148148148148, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1786812, Length=273, Percent_Identity=24.9084249084249, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787820, Length=250, Percent_Identity=24.8, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787545, Length=274, Percent_Identity=23.7226277372263, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17560150, Length=277, Percent_Identity=27.7978339350181, Blast_Score=101, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17562910, Length=277, Percent_Identity=27.4368231046931, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17560220, Length=278, Percent_Identity=28.4172661870504, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17562906, Length=278, Percent_Identity=24.8201438848921, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17559104, Length=279, Percent_Identity=27.9569892473118, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17560332, Length=275, Percent_Identity=26.1818181818182, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17531453, Length=281, Percent_Identity=27.7580071174377, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17536025, Length=272, Percent_Identity=29.4117647058824, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17536651, Length=272, Percent_Identity=28.6764705882353, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562990, Length=277, Percent_Identity=26.3537906137184, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI193204405, Length=281, Percent_Identity=27.7580071174377, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17561272, Length=272, Percent_Identity=31.9852941176471, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI25147288, Length=272, Percent_Identity=28.6764705882353, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17565030, Length=271, Percent_Identity=27.3062730627306, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI72000259, Length=277, Percent_Identity=25.2707581227437, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17562904, Length=276, Percent_Identity=24.6376811594203, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71994604, Length=269, Percent_Identity=26.7657992565056, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562908, Length=276, Percent_Identity=24.6376811594203, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17538486, Length=273, Percent_Identity=26.3736263736264, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17551412, Length=276, Percent_Identity=26.4492753623188, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17563726, Length=275, Percent_Identity=25.8181818181818, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17538480, Length=278, Percent_Identity=25.1798561151079, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115534694, Length=153, Percent_Identity=30.0653594771242, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17555706, Length=270, Percent_Identity=26.2962962962963, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17544670, Length=275, Percent_Identity=24.7272727272727, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71994600, Length=268, Percent_Identity=26.4925373134328, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560676, Length=276, Percent_Identity=23.9130434782609, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17538182, Length=279, Percent_Identity=29.7491039426523, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17561402, Length=273, Percent_Identity=26.007326007326, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17508895, Length=217, Percent_Identity=26.7281105990783, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193207185, Length=148, Percent_Identity=29.0540540540541, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17564282, Length=269, Percent_Identity=24.907063197026, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=271, Percent_Identity=30.9963099630996, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6322861, Length=285, Percent_Identity=29.4736842105263, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI23397609, Length=269, Percent_Identity=30.8550185873606, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI28571526, Length=272, Percent_Identity=30.5147058823529, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI21357041, Length=273, Percent_Identity=30.03663003663, Blast_Score=107, Evalue=8e-24, Organism=Drosophila melanogaster, GI24639444, Length=273, Percent_Identity=29.3040293040293, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24644339, Length=273, Percent_Identity=28.2051282051282, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24644337, Length=272, Percent_Identity=28.6764705882353, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI24643142, Length=268, Percent_Identity=27.9850746268657, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI21355319, Length=273, Percent_Identity=27.4725274725275, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24584744, Length=265, Percent_Identity=27.1698113207547, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI28574402, Length=214, Percent_Identity=29.4392523364486, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24584748, Length=218, Percent_Identity=31.1926605504587, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI161076933, Length=218, Percent_Identity=31.1926605504587, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI17737361, Length=272, Percent_Identity=25.7352941176471, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24580925, Length=212, Percent_Identity=27.3584905660377, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI24665268, Length=231, Percent_Identity=27.7056277056277, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641232, Length=217, Percent_Identity=25.3456221198157, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.125 [C]
Molecular weight: Translated: 30189; Mature: 30189
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPIHPSLKGKVAVVTGGGGVLCSCMAKELARQGMKVVILNRTLEKAEKVKNEIVEQGGE CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCC ALAIQCDVLDAGRVRQAAETVAEVYGPCDVLINGAGGNHPQGITTKEILEPHDLENREMT EEEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCEE TFFDLTAKGFSYVFDLNILGTIIPTQQFLKQMIGRGGTIINISSMSAPRPMTKVPAYSAA EEEEEHHCCEEEEEEHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHH KAGIENFTKWLAVHVAEVGVRVNAIAPGFFLTKQNEHLLKRSDGSYTERTEKILSHTPMK HHHHHHHHHHHHHHHHHHCEEEEEECCCEEEECCCHHHHHCCCCCHHHHHHHHHHCCCHH RLGKPEDLLGTLLWLVDSQTSGFVTGAVVPVDGGFLAYAGV HCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCC >Mature Secondary Structure MLPIHPSLKGKVAVVTGGGGVLCSCMAKELARQGMKVVILNRTLEKAEKVKNEIVEQGGE CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCC ALAIQCDVLDAGRVRQAAETVAEVYGPCDVLINGAGGNHPQGITTKEILEPHDLENREMT EEEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCEE TFFDLTAKGFSYVFDLNILGTIIPTQQFLKQMIGRGGTIINISSMSAPRPMTKVPAYSAA EEEEEHHCCEEEEEEHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHH KAGIENFTKWLAVHVAEVGVRVNAIAPGFFLTKQNEHLLKRSDGSYTERTEKILSHTPMK HHHHHHHHHHHHHHHHHHCEEEEEECCCEEEECCCHHHHHCCCCCHHHHHHHHHHCCCHH RLGKPEDLLGTLLWLVDSQTSGFVTGAVVPVDGGFLAYAGV HCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD+ [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 15.4 {2-deoxygluconate}} [C]
Substrates: @DEOX03.txt*2-Deoxy-D-Gluconate!; NAD(+) [C]
Specific reaction: @DEOX03.txt*2-Deoxy-D-Gluconate! + NAD(+) = @DEHY06.txt*3-Dehydro-2- Deoxy-D-Gluconate! + NADH. [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]