| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is yteU [H]
Identifier: 138895418
GI number: 138895418
Start: 1863848
End: 1864489
Strand: Reverse
Name: yteU [H]
Synonym: GTNG_1762
Alternate gene names: 138895418
Gene position: 1864489-1863848 (Counterclockwise)
Preceding gene: 138895419
Following gene: 138895416
Centisome position: 52.52
GC content: 40.03
Gene sequence:
>642_bases ATGCGTACCGGTTTGGTGGATGGGAAGCTCTATCGGATCTGCGAATGGATTACAAGGCTCGCATACGTTAATTTGTTATG GATTTTTTTTACTATCATCGGGCTGGTGATCTTCGGGATCGCTCCAGCGACAGTGGCGCTGTTTACAATTATAAGGAAAT GGATATTTTTTCATGATACAGAGATTCCAGTGCTGAAAACGTTTGCCCGTACATATAAGTGTGAATTTTGGAGAGCGAAT CGGATTGGGCTGTTGCTTATGGCGATAGCGTATATTTTCTATATTGATATCATCTATCTCGCTCATGTTCCGCCAGAATG GAAACTTCCGTTTTCTGTCGCTTTGCTCATTATTTTTCTCTTTTATATGGTGATGTTGCTGTATGTGTTTCCTATTTATG TGCATTACGAATTGCGTTTTTGGCAATATATGAAGTATGCTTTTATGATTGGAATGGCCAATCCGCTTATGACACTTATC ATGTTGGCTAGTGTGGGAATACTGTTTCTCATCTTGATGTATATCCCGGGTTTAATTCCATTTTTCAGTATCAGTTTGGC GGCATTGGTTGTTATGGGAAGCGCATTGCGTGTGTTTCGAAAAATGGAAGAAAAACAGGCGATATGGCAACAAGGAAAAT AA
Upstream 100 bases:
>100_bases TTGGCTTATGCCGGAGTTTGAAGGGAGAATAAACAAAGTCTCCCTTCTTTTTTTGTCTTATGATATACTAATTTTAAAAG AAATCAAAGGTGGATGAGTT
Downstream 100 bases:
>100_bases CATCATCTTCCGGTGAAATACAGGTATACCATTATGAAGAGGTTTGACGCATATATTGAAAAATGGACTGAGCCAAAGGA GCGTCTTTTTCGAGGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MRTGLVDGKLYRICEWITRLAYVNLLWIFFTIIGLVIFGIAPATVALFTIIRKWIFFHDTEIPVLKTFARTYKCEFWRAN RIGLLLMAIAYIFYIDIIYLAHVPPEWKLPFSVALLIIFLFYMVMLLYVFPIYVHYELRFWQYMKYAFMIGMANPLMTLI MLASVGILFLILMYIPGLIPFFSISLAALVVMGSALRVFRKMEEKQAIWQQGK
Sequences:
>Translated_213_residues MRTGLVDGKLYRICEWITRLAYVNLLWIFFTIIGLVIFGIAPATVALFTIIRKWIFFHDTEIPVLKTFARTYKCEFWRAN RIGLLLMAIAYIFYIDIIYLAHVPPEWKLPFSVALLIIFLFYMVMLLYVFPIYVHYELRFWQYMKYAFMIGMANPLMTLI MLASVGILFLILMYIPGLIPFFSISLAALVVMGSALRVFRKMEEKQAIWQQGK >Mature_213_residues MRTGLVDGKLYRICEWITRLAYVNLLWIFFTIIGLVIFGIAPATVALFTIIRKWIFFHDTEIPVLKTFARTYKCEFWRAN RIGLLLMAIAYIFYIDIIYLAHVPPEWKLPFSVALLIIFLFYMVMLLYVFPIYVHYELRFWQYMKYAFMIGMANPLMTLI MLASVGILFLILMYIPGLIPFFSISLAALVVMGSALRVFRKMEEKQAIWQQGK
Specific function: Unknown
COG id: COG5578
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006938 [H]
Pfam domain/function: PF04854 DUF624 [H]
EC number: NA
Molecular weight: Translated: 25087; Mature: 25087
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGLVDGKLYRICEWITRLAYVNLLWIFFTIIGLVIFGIAPATVALFTIIRKWIFFHDT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EIPVLKTFARTYKCEFWRANRIGLLLMAIAYIFYIDIIYLAHVPPEWKLPFSVALLIIFL CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH FYMVMLLYVFPIYVHYELRFWQYMKYAFMIGMANPLMTLIMLASVGILFLILMYIPGLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFSISLAALVVMGSALRVFRKMEEKQAIWQQGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTGLVDGKLYRICEWITRLAYVNLLWIFFTIIGLVIFGIAPATVALFTIIRKWIFFHDT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EIPVLKTFARTYKCEFWRANRIGLLLMAIAYIFYIDIIYLAHVPPEWKLPFSVALLIIFL CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH FYMVMLLYVFPIYVHYELRFWQYMKYAFMIGMANPLMTLIMLASVGILFLILMYIPGLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFSISLAALVVMGSALRVFRKMEEKQAIWQQGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]