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The map label for this gene is yrpB [H]

Identifier: 138895411

GI number: 138895411

Start: 1854133

End: 1855167

Strand: Reverse

Name: yrpB [H]

Synonym: GTNG_1755

Alternate gene names: 138895411

Gene position: 1855167-1854133 (Counterclockwise)

Preceding gene: 138895412

Following gene: 138895410

Centisome position: 52.25

GC content: 59.52

Gene sequence:

>1035_bases
ATGTTCTCTACGCTTCCCGTCCCCATTATCCAAGCACCGATGGCAGGAGGGGTGTCAACGCCCGAACTGGCAGCGGCGGT
GTCAAATGCCGGAGGGCTTGGATTTTTGGCTGGCGGGTACCAGACGGCGGAGATGATGAGAACGGAGATTCACAAGCTGC
GAACATTGACGGACCGTCCGTTTGGAGTGAATGTGTTTGTGCCAGGGGAAACAACGGTCGATGAAGAGACGCTTAGTCGT
TATCGCGCTGTACTGGCGACTGAGGCGGAACGGCTCGGCGCAACAGTCGGAGAGCCGAAATGGGATGACGATGATTGGGA
GGCGAAACTCGATGTGCTCCTTAAAGAGCGGGTACCGGTCGTCAGCTTTACGTTTGGTTGCCCGGAAACAGCGGTGATCA
CTGCCTTGCAAAAGGCTGGGGCGTTTGTAATCGTGACAGTTACATCGGTGGAGGAAGCCCAAATCGCAGCAGAAGCTGGT
GCGAATGCCCTTTGTGTGCAAGGGGCAGAAGCGGGTGGTCATCGTGCGTCGTTTCGCAACGATCCGGAAAAAGATGAAGT
ATTGACGTTGTTCCCGCTGTTGGCCGATGTACACGCGTCGGTTCGTCTCCCGCTTGTGGCGGCGGGTGGGATCATGGATG
GGTACGGTATCGCAGCGGCGCTTCAAGCGGGGGCGAGTGCGGTGCAGCTCGGGACAGCGTTTTTACGCTGTCCTGAGAGC
GGGGCGCATCCGCTCCATAAACAGGCGCTTGTGGATCCGCGCTTTACCGAAACAGCGGTAACAAGGGCGTTTACCGGCCG
GCCGGCGCGCGGGCTGGCGAACCGGTTTATGGCTGAATATAGCGATCTAGCGCCGGCGGCGTATCCGCAAGTGCACCATA
TGACAAAGCCGATGCGCGCTGCGGCCGCCAAGGTGGGTGACCGAGAGCGGATGGCGCTTTGGGCTGGAGAAGGGTACCGA
ATGGCGCGAGAACTTCCCGCGGGGGAACTCGTGCGCGAATTGAAGCGGGAGCTCGAGGAGGCACAGGGTCGCTAA

Upstream 100 bases:

>100_bases
TGATTGGCTAAGAGAAAGGGATTTTCTGCGCCAAGCACGAAAGAGTAAAGGGGAGTTAACTGAGCTAGGGTGGTTACTTA
TATGAGGGGAGAGATTAGCT

Downstream 100 bases:

>100_bases
ATCAATCTTTGCATTCGGCTCTAGAAGAAGAGAAGCGCATTGTGTTGAGCGAGTTTTGGAATGACGCTGTTTAATCAACC
AAATAGGAAGGGAGAGGAGA

Product: putative 2-nitropropane dioxygenase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MFSTLPVPIIQAPMAGGVSTPELAAAVSNAGGLGFLAGGYQTAEMMRTEIHKLRTLTDRPFGVNVFVPGETTVDEETLSR
YRAVLATEAERLGATVGEPKWDDDDWEAKLDVLLKERVPVVSFTFGCPETAVITALQKAGAFVIVTVTSVEEAQIAAEAG
ANALCVQGAEAGGHRASFRNDPEKDEVLTLFPLLADVHASVRLPLVAAGGIMDGYGIAAALQAGASAVQLGTAFLRCPES
GAHPLHKQALVDPRFTETAVTRAFTGRPARGLANRFMAEYSDLAPAAYPQVHHMTKPMRAAAAKVGDRERMALWAGEGYR
MARELPAGELVRELKRELEEAQGR

Sequences:

>Translated_344_residues
MFSTLPVPIIQAPMAGGVSTPELAAAVSNAGGLGFLAGGYQTAEMMRTEIHKLRTLTDRPFGVNVFVPGETTVDEETLSR
YRAVLATEAERLGATVGEPKWDDDDWEAKLDVLLKERVPVVSFTFGCPETAVITALQKAGAFVIVTVTSVEEAQIAAEAG
ANALCVQGAEAGGHRASFRNDPEKDEVLTLFPLLADVHASVRLPLVAAGGIMDGYGIAAALQAGASAVQLGTAFLRCPES
GAHPLHKQALVDPRFTETAVTRAFTGRPARGLANRFMAEYSDLAPAAYPQVHHMTKPMRAAAAKVGDRERMALWAGEGYR
MARELPAGELVRELKRELEEAQGR
>Mature_344_residues
MFSTLPVPIIQAPMAGGVSTPELAAAVSNAGGLGFLAGGYQTAEMMRTEIHKLRTLTDRPFGVNVFVPGETTVDEETLSR
YRAVLATEAERLGATVGEPKWDDDDWEAKLDVLLKERVPVVSFTFGCPETAVITALQKAGAFVIVTVTSVEEAQIAAEAG
ANALCVQGAEAGGHRASFRNDPEKDEVLTLFPLLADVHASVRLPLVAAGGIMDGYGIAAALQAGASAVQLGTAFLRCPES
GAHPLHKQALVDPRFTETAVTRAFTGRPARGLANRFMAEYSDLAPAAYPQVHHMTKPMRAAAAKVGDRERMALWAGEGYR
MARELPAGELVRELKRELEEAQGR

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322609, Length=359, Percent_Identity=30.6406685236769, Blast_Score=122, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 36664; Mature: 36664

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSTLPVPIIQAPMAGGVSTPELAAAVSNAGGLGFLAGGYQTAEMMRTEIHKLRTLTDRP
CCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC
FGVNVFVPGETTVDEETLSRYRAVLATEAERLGATVGEPKWDDDDWEAKLDVLLKERVPV
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCE
VSFTFGCPETAVITALQKAGAFVIVTVTSVEEAQIAAEAGANALCVQGAEAGGHRASFRN
EEEECCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
DPEKDEVLTLFPLLADVHASVRLPLVAAGGIMDGYGIAAALQAGASAVQLGTAFLRCPES
CCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCC
GAHPLHKQALVDPRFTETAVTRAFTGRPARGLANRFMAEYSDLAPAAYPQVHHMTKPMRA
CCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AAAKVGDRERMALWAGEGYRMARELPAGELVRELKRELEEAQGR
HHHHCCCCHHEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSTLPVPIIQAPMAGGVSTPELAAAVSNAGGLGFLAGGYQTAEMMRTEIHKLRTLTDRP
CCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC
FGVNVFVPGETTVDEETLSRYRAVLATEAERLGATVGEPKWDDDDWEAKLDVLLKERVPV
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCE
VSFTFGCPETAVITALQKAGAFVIVTVTSVEEAQIAAEAGANALCVQGAEAGGHRASFRN
EEEECCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
DPEKDEVLTLFPLLADVHASVRLPLVAAGGIMDGYGIAAALQAGASAVQLGTAFLRCPES
CCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCC
GAHPLHKQALVDPRFTETAVTRAFTGRPARGLANRFMAEYSDLAPAAYPQVHHMTKPMRA
CCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AAAKVGDRERMALWAGEGYRMARELPAGELVRELKRELEEAQGR
HHHHCCCCHHEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]