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The map label for this gene is smf [H]

Identifier: 138894731

GI number: 138894731

Start: 1129705

End: 1130586

Strand: Direct

Name: smf [H]

Synonym: GTNG_1063

Alternate gene names: 138894731

Gene position: 1129705-1130586 (Clockwise)

Preceding gene: 138894730

Following gene: 138894732

Centisome position: 31.82

GC content: 53.06

Gene sequence:

>882_bases
ATGTACGATACGGTCCGTGACCGGCTCATCCATCTTCACCACTGCCGCGGAGCAGGATGGAAGACGATCCACGATTTGCT
TGAGGTTGACCCGACATTGTCCGCTCCATTTTCTTTACCTCCCGCTGTTCTCCGTTCGCTCGTTCCACTCTCCGACGCTC
AATGGGCTGCTTTTTTTCATGATTTGCATTCTATCGACGTGAAAAATGTGGTAAAAACATATAAGGAGCGGGGCATTCGC
ATCATCACCATGTTCGATCTAGACTATCCCCCGCTGCTTAAGCATATATACGATCCGCCGTGGGTGCTGTATGTGAAAGG
AAATATTGCCTTACTTCAAGAAACAAAGTTGATTAGCATCGTCGGCACGAGACGTCCGACAAAAGAAGGAATCGAAGCGC
TCAAAAAACTTGTGCCGCCGCTTGTGGCTGCCGGTTGGACGATTGTGAGCGGGCTTGCCTTTGGTATTGACGTTTGCGCC
CACCAACTCGCCGTTAGTTATGGCGGAACGACGATCGCAGTCATTGCTGGCGGGCTTGACCACATTTATCCGAAAGAACA
CCGCTCCTTCGCCCAGCAGCTTATGAACGAGCAGCTCGTCGTCGCCGAACATCCGCCGGCAACGAAACCACAAGCGTGGC
AGTTTCCGGCGCGCAACCGCATCATTAGCGGGCTGTCGCTTGGCACGCTCGTTGTGCAGGCAAAAGTGAAAAGCGGTTCG
CTCATTACAGCGTCGTATGCGCTTGAACAAGGACGGGAAGTGTTTGCCGTCCCTGGCTCGATCAACTTGGCGGAGGCTGC
CGGACCGAATACGCTCATTCAACACGGAGCAAAACTAGTGCAGGAGGCAGCGGACATTATCGCTGAATTCCCGTACGTAT
AA

Upstream 100 bases:

>100_bases
CGCGGATTGTACGAAAAATGCAAAACGCATTAATGGTTCTACCCCGCACGATCATCACGTGCGGGGTGCTGTTTATCATG
TTGCGAGAAAGGAGAATACG

Downstream 100 bases:

>100_bases
TGATCATGTTTGACAAATACGGCAATAATCATTAATAATAATGAAGATTTCAATTTACTTCCTAGGGGTGGAAGATGGAT
GTCAGACTACTTGGTTATCG

Product: Smf family DNA processing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MYDTVRDRLIHLHHCRGAGWKTIHDLLEVDPTLSAPFSLPPAVLRSLVPLSDAQWAAFFHDLHSIDVKNVVKTYKERGIR
IITMFDLDYPPLLKHIYDPPWVLYVKGNIALLQETKLISIVGTRRPTKEGIEALKKLVPPLVAAGWTIVSGLAFGIDVCA
HQLAVSYGGTTIAVIAGGLDHIYPKEHRSFAQQLMNEQLVVAEHPPATKPQAWQFPARNRIISGLSLGTLVVQAKVKSGS
LITASYALEQGREVFAVPGSINLAEAAGPNTLIQHGAKLVQEAADIIAEFPYV

Sequences:

>Translated_293_residues
MYDTVRDRLIHLHHCRGAGWKTIHDLLEVDPTLSAPFSLPPAVLRSLVPLSDAQWAAFFHDLHSIDVKNVVKTYKERGIR
IITMFDLDYPPLLKHIYDPPWVLYVKGNIALLQETKLISIVGTRRPTKEGIEALKKLVPPLVAAGWTIVSGLAFGIDVCA
HQLAVSYGGTTIAVIAGGLDHIYPKEHRSFAQQLMNEQLVVAEHPPATKPQAWQFPARNRIISGLSLGTLVVQAKVKSGS
LITASYALEQGREVFAVPGSINLAEAAGPNTLIQHGAKLVQEAADIIAEFPYV
>Mature_293_residues
MYDTVRDRLIHLHHCRGAGWKTIHDLLEVDPTLSAPFSLPPAVLRSLVPLSDAQWAAFFHDLHSIDVKNVVKTYKERGIR
IITMFDLDYPPLLKHIYDPPWVLYVKGNIALLQETKLISIVGTRRPTKEGIEALKKLVPPLVAAGWTIVSGLAFGIDVCA
HQLAVSYGGTTIAVIAGGLDHIYPKEHRSFAQQLMNEQLVVAEHPPATKPQAWQFPARNRIISGLSLGTLVVQAKVKSGS
LITASYALEQGREVFAVPGSINLAEAAGPNTLIQHGAKLVQEAADIIAEFPYV

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=205, Percent_Identity=43.9024390243902, Blast_Score=151, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 32107; Mature: 32107

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDTVRDRLIHLHHCRGAGWKTIHDLLEVDPTLSAPFSLPPAVLRSLVPLSDAQWAAFFH
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH
DLHSIDVKNVVKTYKERGIRIITMFDLDYPPLLKHIYDPPWVLYVKGNIALLQETKLISI
HHHHCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCEEEEEECCEEEEECCEEEEE
VGTRRPTKEGIEALKKLVPPLVAAGWTIVSGLAFGIDVCAHQLAVSYGGTTIAVIAGGLD
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH
HIYPKEHRSFAQQLMNEQLVVAEHPPATKPQAWQFPARNRIISGLSLGTLVVQAKVKSGS
HCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCC
LITASYALEQGREVFAVPGSINLAEAAGPNTLIQHGAKLVQEAADIIAEFPYV
EEEHHHHHHCCCEEEECCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYDTVRDRLIHLHHCRGAGWKTIHDLLEVDPTLSAPFSLPPAVLRSLVPLSDAQWAAFFH
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH
DLHSIDVKNVVKTYKERGIRIITMFDLDYPPLLKHIYDPPWVLYVKGNIALLQETKLISI
HHHHCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCEEEEEECCEEEEECCEEEEE
VGTRRPTKEGIEALKKLVPPLVAAGWTIVSGLAFGIDVCAHQLAVSYGGTTIAVIAGGLD
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH
HIYPKEHRSFAQQLMNEQLVVAEHPPATKPQAWQFPARNRIISGLSLGTLVVQAKVKSGS
HCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCC
LITASYALEQGREVFAVPGSINLAEAAGPNTLIQHGAKLVQEAADIIAEFPYV
EEEHHHHHHCCCEEEECCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]