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The map label for this gene is ylbO [H]

Identifier: 138894642

GI number: 138894642

Start: 1037474

End: 1038052

Strand: Direct

Name: ylbO [H]

Synonym: GTNG_0972

Alternate gene names: 138894642

Gene position: 1037474-1038052 (Clockwise)

Preceding gene: 138894641

Following gene: 138894643

Centisome position: 29.22

GC content: 51.12

Gene sequence:

>579_bases
ATGACGGGAGTACGCCAAGACGCATGGACGAAAGAAGAGGATGAACTGCTTGCTAACGTCGTCCTTGAGTATATTCGTAC
AGGCGGCACCCAACTGGAAGCGTTTGCCGAAGTAGGGCGGCGCTTGTCGCGGACGGCCGCGGCATGCGGATTTCGCTGGA
ACTCATATGTTCGCAAGCAGTATAAAGAGGAAATTGAGCAGGCGAAACAGGAGAGGAAAACGAGAAAAAAAGAAACGGCA
TCCGAAAAAGATGGCAGGGGGCAACCGGAAATGGAAGCGGCGGTTGAGAGTAAGCTGTCATGGGCGGAGGTGTTGGCCTT
TTTGCAAGCTGAAGGGCAAAAGGCGCGCGAGATCCGACGGACAGCTGATGAAAACCGGGCGTTAAAAAACGATATGGAAC
AGCTGCAGCAAATGGTTACAAAATTACAAATGGAAAAAGAAGCGCTGCAAAAACAGCTGGCGGCTGTTCAAGAGGAGTAT
AAAACCCTGCTCACCATTATGGAGCGAGCGCGAAAAATGATGACAGGATCGGAAAAACAAGCGGAACAAACAGCAGCTGA
GGGTGTCGGTGAGGGATAA

Upstream 100 bases:

>100_bases
GCATTGCGTCCTTTTTTGCGCAAGAAGTAATTTTTTCCTTCTACCGTTTCTATTAGCCGCATACATATAATGACAAAGCG
GCAATAAGGAGGGGAAGGAG

Downstream 100 bases:

>100_bases
AAAGCTGGCTTTTTAGCCGGCTTTTTTTCTTAACGGACTAAGAAGACATTTGCTAAAATAAGGCTAGCGTGACTGTGCTA
GAAAGCGGGGGAGAGGCATG

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTGVRQDAWTKEEDELLANVVLEYIRTGGTQLEAFAEVGRRLSRTAAACGFRWNSYVRKQYKEEIEQAKQERKTRKKETA
SEKDGRGQPEMEAAVESKLSWAEVLAFLQAEGQKAREIRRTADENRALKNDMEQLQQMVTKLQMEKEALQKQLAAVQEEY
KTLLTIMERARKMMTGSEKQAEQTAAEGVGEG

Sequences:

>Translated_192_residues
MTGVRQDAWTKEEDELLANVVLEYIRTGGTQLEAFAEVGRRLSRTAAACGFRWNSYVRKQYKEEIEQAKQERKTRKKETA
SEKDGRGQPEMEAAVESKLSWAEVLAFLQAEGQKAREIRRTADENRALKNDMEQLQQMVTKLQMEKEALQKQLAAVQEEY
KTLLTIMERARKMMTGSEKQAEQTAAEGVGEG
>Mature_191_residues
TGVRQDAWTKEEDELLANVVLEYIRTGGTQLEAFAEVGRRLSRTAAACGFRWNSYVRKQYKEEIEQAKQERKTRKKETAS
EKDGRGQPEMEAAVESKLSWAEVLAFLQAEGQKAREIRRTADENRALKNDMEQLQQMVTKLQMEKEALQKQLAAVQEEYK
TLLTIMERARKMMTGSEKQAEQTAAEGVGEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH myb-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014243
- InterPro:   IPR012287
- InterPro:   IPR017930
- InterPro:   IPR001005 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21922; Mature: 21791

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS00037 MYB_1 ; PS50090 MYB_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGVRQDAWTKEEDELLANVVLEYIRTGGTQLEAFAEVGRRLSRTAAACGFRWNSYVRKQ
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKEEIEQAKQERKTRKKETASEKDGRGQPEMEAAVESKLSWAEVLAFLQAEGQKAREIRR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TADENRALKNDMEQLQQMVTKLQMEKEALQKQLAAVQEEYKTLLTIMERARKMMTGSEKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AEQTAAEGVGEG
HHHHHHHCCCCC
>Mature Secondary Structure 
TGVRQDAWTKEEDELLANVVLEYIRTGGTQLEAFAEVGRRLSRTAAACGFRWNSYVRKQ
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKEEIEQAKQERKTRKKETASEKDGRGQPEMEAAVESKLSWAEVLAFLQAEGQKAREIRR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TADENRALKNDMEQLQQMVTKLQMEKEALQKQLAAVQEEYKTLLTIMERARKMMTGSEKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AEQTAAEGVGEG
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]