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The map label for this gene is yurN [H]

Identifier: 138894079

GI number: 138894079

Start: 458347

End: 459219

Strand: Direct

Name: yurN [H]

Synonym: GTNG_0405

Alternate gene names: 138894079

Gene position: 458347-459219 (Clockwise)

Preceding gene: 138894078

Following gene: 138894080

Centisome position: 12.91

GC content: 33.45

Gene sequence:

>873_bases
ATGAGAAAAAAGTTATTGATTCAAGATTTGAAAGCGATACCGTATCTCTTGCCATTTTTTTTAGTATATGTAGTTTTTAC
TATCTTTCCTGTTTTTAAAGGCTTTGAAATGAGTCTACACGAGTGGAAACTAGTTGGAAAAGTTGATTTTATTGGAATAG
AAAATTACAAAAAAATGATTTCCGATCCTTTCTTCTGGGAAACGTTATGGAATACGACTAAATTTGTTATTTATACTACG
CCTACAATGATCTTATTAGCTTTGGGGTTGGCTCTTTTAGCAAACTTAAAAACCAAGCTAAAAAAATTCTTCCGAGCAGC
TTATTTTCTTCCTAGTATTCTTTCCGTATCAGTTATATCATTTTTAGCTATTTATATGCTTCAACCATACAACGGTTTTG
TCAATACGTTTCTTCACTTAATTGGTATTCAAGCTGAGCCATTTTGGATTGCTGATAAAAAACTTGCTTGGGTTGCAATT
GTAGTCGTTACCTTATGGTGGACGGTTGGCTTTAATATGATATTGTTTTTGGCGGCTCTTCAAGATATTCCCGATTCATT
ATATGAAGCTGCTGAAATAGATGGTGCCTCTCGTTGGCAAATGTTTATTCACATTACTTTACCTCAGTTAGTACCAATAG
GAAAAGTCATCTTGTTATTGCAAATTATTGCATCGTATAAGGTGTTTGCCCAAATTATGTTGATAACTGGAGGAGGACCA
GGAGGGACTACAAGACCATTAATACAATATATTTATGAAGTTGGGTTTAATAAGAATTTGATGGGGTATGCAGCAACAAT
GTCCTATGCACTTTTCATGATCTTATTAATTCTATCTATTGTTCAATTAAGGTATCAAAGAAAGGAGAACTGA

Upstream 100 bases:

>100_bases
TGATTTCCTCTTTTTGTTAAAATTGCTCAACTGCAGGTTCTTTCTACAACGTTTTATAAGACTCAGCCTTTTTTCTTAAA
TTTGAAAAGGAGTTCGGACA

Downstream 100 bases:

>100_bases
TAAATGAGTATGCCTCAATTAGCGCCTAATATACAAGACAAAACGCAAATACGTCAAAAATCTTTATTGCAGAGAAATCG
CGATTCATATTTATGGATAA

Product: ABC-type sugar transport systems, permease components

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MRKKLLIQDLKAIPYLLPFFLVYVVFTIFPVFKGFEMSLHEWKLVGKVDFIGIENYKKMISDPFFWETLWNTTKFVIYTT
PTMILLALGLALLANLKTKLKKFFRAAYFLPSILSVSVISFLAIYMLQPYNGFVNTFLHLIGIQAEPFWIADKKLAWVAI
VVVTLWWTVGFNMILFLAALQDIPDSLYEAAEIDGASRWQMFIHITLPQLVPIGKVILLLQIIASYKVFAQIMLITGGGP
GGTTRPLIQYIYEVGFNKNLMGYAATMSYALFMILLILSIVQLRYQRKEN

Sequences:

>Translated_290_residues
MRKKLLIQDLKAIPYLLPFFLVYVVFTIFPVFKGFEMSLHEWKLVGKVDFIGIENYKKMISDPFFWETLWNTTKFVIYTT
PTMILLALGLALLANLKTKLKKFFRAAYFLPSILSVSVISFLAIYMLQPYNGFVNTFLHLIGIQAEPFWIADKKLAWVAI
VVVTLWWTVGFNMILFLAALQDIPDSLYEAAEIDGASRWQMFIHITLPQLVPIGKVILLLQIIASYKVFAQIMLITGGGP
GGTTRPLIQYIYEVGFNKNLMGYAATMSYALFMILLILSIVQLRYQRKEN
>Mature_290_residues
MRKKLLIQDLKAIPYLLPFFLVYVVFTIFPVFKGFEMSLHEWKLVGKVDFIGIENYKKMISDPFFWETLWNTTKFVIYTT
PTMILLALGLALLANLKTKLKKFFRAAYFLPSILSVSVISFLAIYMLQPYNGFVNTFLHLIGIQAEPFWIADKKLAWVAI
VVVTLWWTVGFNMILFLAALQDIPDSLYEAAEIDGASRWQMFIHITLPQLVPIGKVILLLQIIASYKVFAQIMLITGGGP
GGTTRPLIQYIYEVGFNKNLMGYAATMSYALFMILLILSIVQLRYQRKEN

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=281, Percent_Identity=29.8932384341637, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1787570, Length=268, Percent_Identity=32.4626865671642, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1790465, Length=257, Percent_Identity=30.3501945525292, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33296; Mature: 33296

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKLLIQDLKAIPYLLPFFLVYVVFTIFPVFKGFEMSLHEWKLVGKVDFIGIENYKKMI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCEEEEEHHHHHHHH
SDPFFWETLWNTTKFVIYTTPTMILLALGLALLANLKTKLKKFFRAAYFLPSILSVSVIS
CCCHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLAIYMLQPYNGFVNTFLHLIGIQAEPFWIADKKLAWVAIVVVTLWWTVGFNMILFLAAL
HHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDIPDSLYEAAEIDGASRWQMFIHITLPQLVPIGKVILLLQIIASYKVFAQIMLITGGGP
HHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
GGTTRPLIQYIYEVGFNKNLMGYAATMSYALFMILLILSIVQLRYQRKEN
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKKLLIQDLKAIPYLLPFFLVYVVFTIFPVFKGFEMSLHEWKLVGKVDFIGIENYKKMI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCEEEEEHHHHHHHH
SDPFFWETLWNTTKFVIYTTPTMILLALGLALLANLKTKLKKFFRAAYFLPSILSVSVIS
CCCHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLAIYMLQPYNGFVNTFLHLIGIQAEPFWIADKKLAWVAIVVVTLWWTVGFNMILFLAAL
HHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDIPDSLYEAAEIDGASRWQMFIHITLPQLVPIGKVILLLQIIASYKVFAQIMLITGGGP
HHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
GGTTRPLIQYIYEVGFNKNLMGYAATMSYALFMILLILSIVQLRYQRKEN
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]