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The map label for this gene is araN [H]

Identifier: 138894078

GI number: 138894078

Start: 456470

End: 457723

Strand: Direct

Name: araN [H]

Synonym: GTNG_0404

Alternate gene names: 138894078

Gene position: 456470-457723 (Clockwise)

Preceding gene: 138894077

Following gene: 138894079

Centisome position: 12.86

GC content: 36.68

Gene sequence:

>1254_bases
GTGTTAATTGTTTTTTTATTGGCTGCCTGTTCAGGTAATAAAAGTAGTAACACGAAGGTTCCAGAAGGTAGAACTGAAAT
TGTAATGTGGAATTTATTTGGTGGTGGAGATGCGGAATACATGCAAGAAATTGTTGACGCTTTCAATGAAAGCCAAGATA
AATATTTCATCACTAACGTCTTTCAAGAATATGAAGAGTATTATACAAAACTTTTGACGAGTATTGCCTCAGGGAAAGGT
CCTGATTTGGCTATTGCACATAGTTATGTAATTCCAGAATTAGTCGCTGAAGGACTGGTTACGCCTATTGATAAATATGC
TTCAGAAATCGGTCTTAAGTGGGAGGAATTTAACCAAAACGTTCTTGAAGCTGTAATTTTTGAAGATAAACACTATGCCG
TTCCAATTGATACCCATCCTGAAATCATGTTTATAAATAACAAATTAGTACGAGAAGCTGGTCTCTTAAATGATGATGGA
ACAGTGATGATGGAAGAAACTCCTGAAGGATTTGTAGAATTTTTAACTAAGTTAAAAGAGAAGTTGCCAGAAGGTAAAAT
GCCGTTTGCTTTTTCTAATGTCGGAGAAGATCCTTATCGAATTTGGTGGGCTCTATACAATCAATTAGGCGGCGAACATA
TTGTAGAGGGAGATTTAGAACATCCAAAATATGTTTTAGACACTGAGAAAGCCATTCAAGCAGCAAAATATATATATGAT
TTATATCATACCCATAAAGTTATCCCGTTGAATTTAGCCGATTTTTATAGTGATTTTCAAACTGGCAATGCAGCTGTCAT
GGCAACAGGTGTTTGGGCGACAGGAATTTGGGAAAAAACTGATGGTCTAGAATTTACCCCAATGCCATTCCCGAATATGT
TTGGTCAAAAGGCTGCTTGGGCTAGTTCCCACACTTTTGTGTTACCATTCTATAGCAATGCCGATGAAGAGGTCTTAAAA
GGTGCAGTAGAGTTTATGAAATTCGCAACGGATAATGGTGCGATGTGGGCTAAAGCTGGACATATTCCTGCAAAAGATAC
CGTTGTTGAATCGAAAGAATTTAAAGAATTACCATATCGTAGTGATTATGCACAAGTTGCAGACTATGTAAAAGTTGTTG
ATAAAACAGTTCACGCACGTGGTATTCAAGATATCATGATTCGAAACCTAGATAGAATTTGGACAAACGAGGCAACACCT
GAAGAAGCATTTAAAACCATTGAACAAGAAGTGACCGAATTAATCAGTAATTAA

Upstream 100 bases:

>100_bases
AATTAAAAGATAAATACAGAATTTTTTGCAAATAAATACGTGTAGCAAAACAAGATTATTATAATCAGGGGGAGTGGAAA
TGAGGAAAATTTTTAGTATT

Downstream 100 bases:

>100_bases
TAGTTTAGAATATGACTATTATTATCAGAGTCTGATTCTTGCTGTAGATGAGCAAAATCACTAACATCAATTGAAAAGAA
GGCATGAACCTAATTCCTTG

Product: sugar transporter sugar binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MLIVFLLAACSGNKSSNTKVPEGRTEIVMWNLFGGGDAEYMQEIVDAFNESQDKYFITNVFQEYEEYYTKLLTSIASGKG
PDLAIAHSYVIPELVAEGLVTPIDKYASEIGLKWEEFNQNVLEAVIFEDKHYAVPIDTHPEIMFINNKLVREAGLLNDDG
TVMMEETPEGFVEFLTKLKEKLPEGKMPFAFSNVGEDPYRIWWALYNQLGGEHIVEGDLEHPKYVLDTEKAIQAAKYIYD
LYHTHKVIPLNLADFYSDFQTGNAAVMATGVWATGIWEKTDGLEFTPMPFPNMFGQKAAWASSHTFVLPFYSNADEEVLK
GAVEFMKFATDNGAMWAKAGHIPAKDTVVESKEFKELPYRSDYAQVADYVKVVDKTVHARGIQDIMIRNLDRIWTNEATP
EEAFKTIEQEVTELISN

Sequences:

>Translated_417_residues
MLIVFLLAACSGNKSSNTKVPEGRTEIVMWNLFGGGDAEYMQEIVDAFNESQDKYFITNVFQEYEEYYTKLLTSIASGKG
PDLAIAHSYVIPELVAEGLVTPIDKYASEIGLKWEEFNQNVLEAVIFEDKHYAVPIDTHPEIMFINNKLVREAGLLNDDG
TVMMEETPEGFVEFLTKLKEKLPEGKMPFAFSNVGEDPYRIWWALYNQLGGEHIVEGDLEHPKYVLDTEKAIQAAKYIYD
LYHTHKVIPLNLADFYSDFQTGNAAVMATGVWATGIWEKTDGLEFTPMPFPNMFGQKAAWASSHTFVLPFYSNADEEVLK
GAVEFMKFATDNGAMWAKAGHIPAKDTVVESKEFKELPYRSDYAQVADYVKVVDKTVHARGIQDIMIRNLDRIWTNEATP
EEAFKTIEQEVTELISN
>Mature_417_residues
MLIVFLLAACSGNKSSNTKVPEGRTEIVMWNLFGGGDAEYMQEIVDAFNESQDKYFITNVFQEYEEYYTKLLTSIASGKG
PDLAIAHSYVIPELVAEGLVTPIDKYASEIGLKWEEFNQNVLEAVIFEDKHYAVPIDTHPEIMFINNKLVREAGLLNDDG
TVMMEETPEGFVEFLTKLKEKLPEGKMPFAFSNVGEDPYRIWWALYNQLGGEHIVEGDLEHPKYVLDTEKAIQAAKYIYD
LYHTHKVIPLNLADFYSDFQTGNAAVMATGVWATGIWEKTDGLEFTPMPFPNMFGQKAAWASSHTFVLPFYSNADEEVLK
GAVEFMKFATDNGAMWAKAGHIPAKDTVVESKEFKELPYRSDYAQVADYVKVVDKTVHARGIQDIMIRNLDRIWTNEATP
EEAFKTIEQEVTELISN

Specific function: Part of the binding-protein-dependent transport system for L-arabinose [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47208; Mature: 47208

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVFLLAACSGNKSSNTKVPEGRTEIVMWNLFGGGDAEYMQEIVDAFNESQDKYFITNV
CCCEEEEHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHH
FQEYEEYYTKLLTSIASGKGPDLAIAHSYVIPELVAEGLVTPIDKYASEIGLKWEEFNQN
HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
VLEAVIFEDKHYAVPIDTHPEIMFINNKLVREAGLLNDDGTVMMEETPEGFVEFLTKLKE
HHHHHHCCCCCEEEECCCCCCEEEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHH
KLPEGKMPFAFSNVGEDPYRIWWALYNQLGGEHIVEGDLEHPKYVLDTEKAIQAAKYIYD
HCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCEEECHHHHHHHHHHHHH
LYHTHKVIPLNLADFYSDFQTGNAAVMATGVWATGIWEKTDGLEFTPMPFPNMFGQKAAW
HHHCCCEEEECHHHHHHHHCCCCEEEEEECCEECCCEECCCCCEECCCCCCHHHCCCCCC
ASSHTFVLPFYSNADEEVLKGAVEFMKFATDNGAMWAKAGHIPAKDTVVESKEFKELPYR
CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHCCCHHHHCCCCC
SDYAQVADYVKVVDKTVHARGIQDIMIRNLDRIWTNEATPEEAFKTIEQEVTELISN
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIVFLLAACSGNKSSNTKVPEGRTEIVMWNLFGGGDAEYMQEIVDAFNESQDKYFITNV
CCCEEEEHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHH
FQEYEEYYTKLLTSIASGKGPDLAIAHSYVIPELVAEGLVTPIDKYASEIGLKWEEFNQN
HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
VLEAVIFEDKHYAVPIDTHPEIMFINNKLVREAGLLNDDGTVMMEETPEGFVEFLTKLKE
HHHHHHCCCCCEEEECCCCCCEEEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHH
KLPEGKMPFAFSNVGEDPYRIWWALYNQLGGEHIVEGDLEHPKYVLDTEKAIQAAKYIYD
HCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCEEECHHHHHHHHHHHHH
LYHTHKVIPLNLADFYSDFQTGNAAVMATGVWATGIWEKTDGLEFTPMPFPNMFGQKAAW
HHHCCCEEEECHHHHHHHHCCCCEEEEEECCEECCCEECCCCCEECCCCCCHHHCCCCCC
ASSHTFVLPFYSNADEEVLKGAVEFMKFATDNGAMWAKAGHIPAKDTVVESKEFKELPYR
CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHCCCHHHHCCCCC
SDYAQVADYVKVVDKTVHARGIQDIMIRNLDRIWTNEATPEEAFKTIEQEVTELISN
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]