| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474928
Identifier: 13474928
GI number: 13474928
Start: 4781651
End: 4782412
Strand: Direct
Name: 13474928
Synonym: mlr5915
Alternate gene names: NA
Gene position: 4781651-4782412 (Clockwise)
Preceding gene: 13474927
Following gene: 13474934
Centisome position: 67.96
GC content: 62.86
Gene sequence:
>762_bases GTGACGCCTGCATTCATACGTAGAGGGGGCTCCATCGAAATAATCGATCTTACGAAGAGTAACGAACATGAAAAGCATTG CTCGGGAGGCGACGCCCGCCGGAAATCTCTCCAGTCATGCGCAAGGCGGAGGTGGGACGGCCAGAGCGTGACCAGTGTCA GCCTCGACAATGGCGACAGGCTGGAAGTCGGCATCGTCGTCAACTCAGCCGGGCCGAATGCCGGCACGGTGGCTGCCATG GCGGGGCTGGTGTTGCCGGTCGAGCCGCGCAAGCGCAACGTCTTCGTCTTCGAGGCGCGCGACAAATATTCTGATATGCC GCTGCTGGTCGATCCGTCCGGCATCTATGTCCGGCCGGAAGGTTCGGTCTATCTCACTGGCGGCGCCGAACCGGAAGAAG GCGACGGCCCGGCCGACCCCACCGATTTCGAGGTCGACTGGCCGCTGTTCGAAGAGGTGATCTGGCCGGTGCTGGCGACC CGCATTCCCGCCTTCGAGGCGATCAAGCCGACACGCGCCTGGGCCGGCCATTACGACTACAACACGCTCGACCAGAACGC GGTGATCGGCCCGCATCCGCAGGTTAAGAATTTCTTCTTCGCCAATGGTTTTTCCGGCCACGGCCTGCAGCAGGCGCCGG CGGTCGGCAAGGCGCTGGCCGAGCTGATCGTGCACGGCGGCTACCGCACGGTGGACTGCTCGGCGTTTGGGTACAGCCGT GTCGCTGAAGGGCGGGCGTTCAGGGAATTGAATGTGATCTAA
Upstream 100 bases:
>100_bases TGGCGGTGTGACCAGATGGATCTTTGAAAAGCCGACATTGCCGCTGTTTTTGGCTCGATGACGGTTCCGGACCCGCACCG ATGCTGTTCAAAGCTCTACT
Downstream 100 bases:
>100_bases CGCTGGCGGGACAGCCCCCTCTCTGGCCTGCCGGCCATCTCCCCCGCAAGGGGGGAGACCGGCAGCTTCCCTGGCGGCTC CAAACTTCTAGCCTTGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase; Sarcosine Oxidase Beta Subunit; FAD-Dependent Oxidoreductase Domain-Containing; Glycine/D-Amino Acid Oxidase Deaminating; Glycine Oxidase ThiO; Glycine/D-Amino Acid Oxidase; Sarcosine Dehydrogenase; Sarcosine Oxidase Subunit Beta; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTPAFIRRGGSIEIIDLTKSNEHEKHCSGGDARRKSLQSCARRRWDGQSVTSVSLDNGDRLEVGIVVNSAGPNAGTVAAM AGLVLPVEPRKRNVFVFEARDKYSDMPLLVDPSGIYVRPEGSVYLTGGAEPEEGDGPADPTDFEVDWPLFEEVIWPVLAT RIPAFEAIKPTRAWAGHYDYNTLDQNAVIGPHPQVKNFFFANGFSGHGLQQAPAVGKALAELIVHGGYRTVDCSAFGYSR VAEGRAFRELNVI
Sequences:
>Translated_253_residues MTPAFIRRGGSIEIIDLTKSNEHEKHCSGGDARRKSLQSCARRRWDGQSVTSVSLDNGDRLEVGIVVNSAGPNAGTVAAM AGLVLPVEPRKRNVFVFEARDKYSDMPLLVDPSGIYVRPEGSVYLTGGAEPEEGDGPADPTDFEVDWPLFEEVIWPVLAT RIPAFEAIKPTRAWAGHYDYNTLDQNAVIGPHPQVKNFFFANGFSGHGLQQAPAVGKALAELIVHGGYRTVDCSAFGYSR VAEGRAFRELNVI >Mature_252_residues TPAFIRRGGSIEIIDLTKSNEHEKHCSGGDARRKSLQSCARRRWDGQSVTSVSLDNGDRLEVGIVVNSAGPNAGTVAAMA GLVLPVEPRKRNVFVFEARDKYSDMPLLVDPSGIYVRPEGSVYLTGGAEPEEGDGPADPTDFEVDWPLFEEVIWPVLATR IPAFEAIKPTRAWAGHYDYNTLDQNAVIGPHPQVKNFFFANGFSGHGLQQAPAVGKALAELIVHGGYRTVDCSAFGYSRV AEGRAFRELNVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8923708, Length=207, Percent_Identity=47.8260869565217, Blast_Score=187, Evalue=7e-48, Organism=Caenorhabditis elegans, GI17541536, Length=191, Percent_Identity=38.7434554973822, Blast_Score=137, Evalue=4e-33, Organism=Drosophila melanogaster, GI20129729, Length=228, Percent_Identity=40.7894736842105, Blast_Score=164, Evalue=6e-41, Organism=Drosophila melanogaster, GI17985989, Length=223, Percent_Identity=32.7354260089686, Blast_Score=126, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27542; Mature: 27411
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAFIRRGGSIEIIDLTKSNEHEKHCSGGDARRKSLQSCARRRWDGQSVTSVSLDNGDR CCCHHHCCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCE LEVGIVVNSAGPNAGTVAAMAGLVLPVEPRKRNVFVFEARDKYSDMPLLVDPSGIYVRPE EEEEEEEECCCCCCCHHHHHHCEEEECCCCCCCEEEEECCCCCCCCCEEECCCCEEECCC GSVYLTGGAEPEEGDGPADPTDFEVDWPLFEEVIWPVLATRIPAFEAIKPTRAWAGHYDY CCEEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCHHHCCCCCHHHCCCCCC NTLDQNAVIGPHPQVKNFFFANGFSGHGLQQAPAVGKALAELIVHGGYRTVDCSAFGYSR CCCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHH VAEGRAFRELNVI HHCCCCCEEECCC >Mature Secondary Structure TPAFIRRGGSIEIIDLTKSNEHEKHCSGGDARRKSLQSCARRRWDGQSVTSVSLDNGDR CCHHHCCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCE LEVGIVVNSAGPNAGTVAAMAGLVLPVEPRKRNVFVFEARDKYSDMPLLVDPSGIYVRPE EEEEEEEECCCCCCCHHHHHHCEEEECCCCCCCEEEEECCCCCCCCCEEECCCCEEECCC GSVYLTGGAEPEEGDGPADPTDFEVDWPLFEEVIWPVLATRIPAFEAIKPTRAWAGHYDY CCEEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCHHHCCCCCHHHCCCCCC NTLDQNAVIGPHPQVKNFFFANGFSGHGLQQAPAVGKALAELIVHGGYRTVDCSAFGYSR CCCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHH VAEGRAFRELNVI HHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA