| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474927
Identifier: 13474927
GI number: 13474927
Start: 4780724
End: 4781611
Strand: Direct
Name: 13474927
Synonym: mlr5914
Alternate gene names: NA
Gene position: 4780724-4781611 (Clockwise)
Preceding gene: 13474926
Following gene: 13474928
Centisome position: 67.95
GC content: 59.8
Gene sequence:
>888_bases ATGGGCTTTAAAACGGTACTCTGTTTGACCGGCGCTGACCATTCCGATCAGGACGTCAGAACTGCTGCCGGCTTGTGTGC GGAAATCGGCGCACACCTTTCCGTACTGATTATACCCGCTCCGATGCTCCTTATGTCGCATCGGCGGATCGGAGATGGTG TCTCCGAGTGGCCGGCAGGACGTGGACAGGCAATTGCCAGATTGAACGATCGGTTTCGGCAAATCGATCGATTTACACAG GACGCGGTCAGACTGGAAAGACACTCCAGAGATATCCAGAAACTGCTGGAATCTATGTCGCTCGCCTATGACGTTGACAC CGACTATTACGATCCGGCCAGCCTCGGTGAAGTGGCACGACAGCGGGCGCTCTGCGCCGACCTCACGATTGTCGGACCAG GGCTCCTCAACGACGAGAATCTCGGACCTCCTGTGGTCAACGGCTGCTTGTTCGATACGGGAAAGCCGGTGCTCGTTGTG CCGAAGGGGGCTGAGGCGACGCTGTGGCCACGGCGCGTCCTGGTCGGTTGGGATTCGCGAGTCGAGGCGTCCCGTGCGGT TCGAGAAGCGCTGGGCCTCCTATGCGTTGCTGAGGAAGTTCGTGTCGCCCTGGTCGATCCGAAGGCCAACTACAACGGGA ACGGCGCGGAGCCTGGAGCCGACATCGCTGCCTATCTCACTCGGCACGGTGCTCGGGTGTCGGTTGACCTCCTGCCAAGT GCCGGCAAATCGGCGGCCACGGTCCTTGCGCAGCACGCAATCGACATTTCTGCGGACATGATCGTCATGGGCGCCTATGG CAGCCGTCGGCTGCGTGAGCGGCTCTTTGGCGGTGTGACCAGATGGATCTTTGAAAAGCCGACATTGCCGCTGTTTTTGG CTCGATGA
Upstream 100 bases:
>100_bases GAATTGAGTGCCGAGTGTGGTTCCACTCCCTTTCCTCGCGCTGTGAGCCGGTCTTGCGGCCTGAAACGCCCTCAACGGAT ACTCAGGAAGAAACAGGAAA
Downstream 100 bases:
>100_bases CGGTTCCGGACCCGCACCGATGCTGTTCAAAGCTCTACTGTGACGCCTGCATTCATACGTAGAGGGGGCTCCATCGAAAT AATCGATCTTACGAAGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; Universal Stress Protein UspA Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MGFKTVLCLTGADHSDQDVRTAAGLCAEIGAHLSVLIIPAPMLLMSHRRIGDGVSEWPAGRGQAIARLNDRFRQIDRFTQ DAVRLERHSRDIQKLLESMSLAYDVDTDYYDPASLGEVARQRALCADLTIVGPGLLNDENLGPPVVNGCLFDTGKPVLVV PKGAEATLWPRRVLVGWDSRVEASRAVREALGLLCVAEEVRVALVDPKANYNGNGAEPGADIAAYLTRHGARVSVDLLPS AGKSAATVLAQHAIDISADMIVMGAYGSRRLRERLFGGVTRWIFEKPTLPLFLAR
Sequences:
>Translated_295_residues MGFKTVLCLTGADHSDQDVRTAAGLCAEIGAHLSVLIIPAPMLLMSHRRIGDGVSEWPAGRGQAIARLNDRFRQIDRFTQ DAVRLERHSRDIQKLLESMSLAYDVDTDYYDPASLGEVARQRALCADLTIVGPGLLNDENLGPPVVNGCLFDTGKPVLVV PKGAEATLWPRRVLVGWDSRVEASRAVREALGLLCVAEEVRVALVDPKANYNGNGAEPGADIAAYLTRHGARVSVDLLPS AGKSAATVLAQHAIDISADMIVMGAYGSRRLRERLFGGVTRWIFEKPTLPLFLAR >Mature_294_residues GFKTVLCLTGADHSDQDVRTAAGLCAEIGAHLSVLIIPAPMLLMSHRRIGDGVSEWPAGRGQAIARLNDRFRQIDRFTQD AVRLERHSRDIQKLLESMSLAYDVDTDYYDPASLGEVARQRALCADLTIVGPGLLNDENLGPPVVNGCLFDTGKPVLVVP KGAEATLWPRRVLVGWDSRVEASRAVREALGLLCVAEEVRVALVDPKANYNGNGAEPGADIAAYLTRHGARVSVDLLPSA GKSAATVLAQHAIDISADMIVMGAYGSRRLRERLFGGVTRWIFEKPTLPLFLAR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31960; Mature: 31829
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFKTVLCLTGADHSDQDVRTAAGLCAEIGAHLSVLIIPAPMLLMSHRRIGDGVSEWPAG CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCCHHHCCCC RGQAIARLNDRFRQIDRFTQDAVRLERHSRDIQKLLESMSLAYDVDTDYYDPASLGEVAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHH QRALCADLTIVGPGLLNDENLGPPVVNGCLFDTGKPVLVVPKGAEATLWPRRVLVGWDSR HHHHHHCEEEECCCCCCCCCCCCCHHCCEEECCCCCEEEEECCCCCCCCCCEEEECCCCH VEASRAVREALGLLCVAEEVRVALVDPKANYNGNGAEPGADIAAYLTRHGARVSVDLLPS HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC AGKSAATVLAQHAIDISADMIVMGAYGSRRLRERLFGGVTRWIFEKPTLPLFLAR CCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure GFKTVLCLTGADHSDQDVRTAAGLCAEIGAHLSVLIIPAPMLLMSHRRIGDGVSEWPAG CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCCHHHCCCC RGQAIARLNDRFRQIDRFTQDAVRLERHSRDIQKLLESMSLAYDVDTDYYDPASLGEVAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHH QRALCADLTIVGPGLLNDENLGPPVVNGCLFDTGKPVLVVPKGAEATLWPRRVLVGWDSR HHHHHHCEEEECCCCCCCCCCCCCHHCCEEECCCCCEEEEECCCCCCCCCCEEEECCCCH VEASRAVREALGLLCVAEEVRVALVDPKANYNGNGAEPGADIAAYLTRHGARVSVDLLPS HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC AGKSAATVLAQHAIDISADMIVMGAYGSRRLRERLFGGVTRWIFEKPTLPLFLAR CCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA