Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13474925

Identifier: 13474925

GI number: 13474925

Start: 4779336

End: 4779815

Strand: Direct

Name: 13474925

Synonym: mlr5912

Alternate gene names: NA

Gene position: 4779336-4779815 (Clockwise)

Preceding gene: 13474924

Following gene: 13474926

Centisome position: 67.93

GC content: 62.08

Gene sequence:

>480_bases
ATGTTTGAAGTCGCGATCAGCCCTGCTGTCAACGATGACGAGGCCGCCCTTGCCAGCCCATTCGTCAAATGCCTCGTGCG
GCTGATCCGTGCTCAGGATACCCACGGGTCATGGGACGGCACAGCGGATGCCGAGTTGCTGGCCGACTTCATCGTCAGCA
AGGAACGGCGTCGTACGATCCCAATCATCGGCGATCCCGATCCGGACGTGCTGTGGAGGCTCGACAAGTTTTACACTGCC
GTCGCCCTTGCGATCGAGGAGCGCTCCGGCCTGATGGCATCGCCGATGATCGAAATGAGCCATGAGGGGTTCGGGCGCGT
GCTTTTCACCGCCGGGCGGCTGGTCGTTTTGTCCAAGACCGTGCGCGACGTCCATCGGTTCGGCTTCGAGACGTTCTGCA
AACTCGCCGCGGCCGGTACGAAACTGGTCGACGATGCCATCGCAGCCATCGACGCCTATCCCGAGGTGGCACGGGCATGA

Upstream 100 bases:

>100_bases
ACGTGTCCTCCGCCCTGGCTGCGCAAGGTGCTGGCCGAAGCTGGTGTCGCCGAAAAGAAACCCTCCTTCGAGGACGAGGA
CTAAAACGAGGAAGTGCAAA

Downstream 100 bases:

>100_bases
AACCGATTTTCGAGCAAGAGGGTCATGTCAGGCCTTGAGGAGCCGCGATGGCCAGCCCACGCGGCCGACGCGGTCGAGGC
CAATTTGGTTCTCGGGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MFEVAISPAVNDDEAALASPFVKCLVRLIRAQDTHGSWDGTADAELLADFIVSKERRRTIPIIGDPDPDVLWRLDKFYTA
VALAIEERSGLMASPMIEMSHEGFGRVLFTAGRLVVLSKTVRDVHRFGFETFCKLAAAGTKLVDDAIAAIDAYPEVARA

Sequences:

>Translated_159_residues
MFEVAISPAVNDDEAALASPFVKCLVRLIRAQDTHGSWDGTADAELLADFIVSKERRRTIPIIGDPDPDVLWRLDKFYTA
VALAIEERSGLMASPMIEMSHEGFGRVLFTAGRLVVLSKTVRDVHRFGFETFCKLAAAGTKLVDDAIAAIDAYPEVARA
>Mature_159_residues
MFEVAISPAVNDDEAALASPFVKCLVRLIRAQDTHGSWDGTADAELLADFIVSKERRRTIPIIGDPDPDVLWRLDKFYTA
VALAIEERSGLMASPMIEMSHEGFGRVLFTAGRLVVLSKTVRDVHRFGFETFCKLAAAGTKLVDDAIAAIDAYPEVARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0460 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004952 [H]

Pfam domain/function: PF03270 DUF269 [H]

EC number: NA

Molecular weight: Translated: 17409; Mature: 17409

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEVAISPAVNDDEAALASPFVKCLVRLIRAQDTHGSWDGTADAELLADFIVSKERRRTI
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PIIGDPDPDVLWRLDKFYTAVALAIEERSGLMASPMIEMSHEGFGRVLFTAGRLVVLSKT
CEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHCCHHHHHHH
VRDVHRFGFETFCKLAAAGTKLVDDAIAAIDAYPEVARA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure
MFEVAISPAVNDDEAALASPFVKCLVRLIRAQDTHGSWDGTADAELLADFIVSKERRRTI
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PIIGDPDPDVLWRLDKFYTAVALAIEERSGLMASPMIEMSHEGFGRVLFTAGRLVVLSKT
CEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHCCHHHHHHH
VRDVHRFGFETFCKLAAAGTKLVDDAIAAIDAYPEVARA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]