| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474925
Identifier: 13474925
GI number: 13474925
Start: 4779336
End: 4779815
Strand: Direct
Name: 13474925
Synonym: mlr5912
Alternate gene names: NA
Gene position: 4779336-4779815 (Clockwise)
Preceding gene: 13474924
Following gene: 13474926
Centisome position: 67.93
GC content: 62.08
Gene sequence:
>480_bases ATGTTTGAAGTCGCGATCAGCCCTGCTGTCAACGATGACGAGGCCGCCCTTGCCAGCCCATTCGTCAAATGCCTCGTGCG GCTGATCCGTGCTCAGGATACCCACGGGTCATGGGACGGCACAGCGGATGCCGAGTTGCTGGCCGACTTCATCGTCAGCA AGGAACGGCGTCGTACGATCCCAATCATCGGCGATCCCGATCCGGACGTGCTGTGGAGGCTCGACAAGTTTTACACTGCC GTCGCCCTTGCGATCGAGGAGCGCTCCGGCCTGATGGCATCGCCGATGATCGAAATGAGCCATGAGGGGTTCGGGCGCGT GCTTTTCACCGCCGGGCGGCTGGTCGTTTTGTCCAAGACCGTGCGCGACGTCCATCGGTTCGGCTTCGAGACGTTCTGCA AACTCGCCGCGGCCGGTACGAAACTGGTCGACGATGCCATCGCAGCCATCGACGCCTATCCCGAGGTGGCACGGGCATGA
Upstream 100 bases:
>100_bases ACGTGTCCTCCGCCCTGGCTGCGCAAGGTGCTGGCCGAAGCTGGTGTCGCCGAAAAGAAACCCTCCTTCGAGGACGAGGA CTAAAACGAGGAAGTGCAAA
Downstream 100 bases:
>100_bases AACCGATTTTCGAGCAAGAGGGTCATGTCAGGCCTTGAGGAGCCGCGATGGCCAGCCCACGCGGCCGACGCGGTCGAGGC CAATTTGGTTCTCGGGGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MFEVAISPAVNDDEAALASPFVKCLVRLIRAQDTHGSWDGTADAELLADFIVSKERRRTIPIIGDPDPDVLWRLDKFYTA VALAIEERSGLMASPMIEMSHEGFGRVLFTAGRLVVLSKTVRDVHRFGFETFCKLAAAGTKLVDDAIAAIDAYPEVARA
Sequences:
>Translated_159_residues MFEVAISPAVNDDEAALASPFVKCLVRLIRAQDTHGSWDGTADAELLADFIVSKERRRTIPIIGDPDPDVLWRLDKFYTA VALAIEERSGLMASPMIEMSHEGFGRVLFTAGRLVVLSKTVRDVHRFGFETFCKLAAAGTKLVDDAIAAIDAYPEVARA >Mature_159_residues MFEVAISPAVNDDEAALASPFVKCLVRLIRAQDTHGSWDGTADAELLADFIVSKERRRTIPIIGDPDPDVLWRLDKFYTA VALAIEERSGLMASPMIEMSHEGFGRVLFTAGRLVVLSKTVRDVHRFGFETFCKLAAAGTKLVDDAIAAIDAYPEVARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0460 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004952 [H]
Pfam domain/function: PF03270 DUF269 [H]
EC number: NA
Molecular weight: Translated: 17409; Mature: 17409
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEVAISPAVNDDEAALASPFVKCLVRLIRAQDTHGSWDGTADAELLADFIVSKERRRTI CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC PIIGDPDPDVLWRLDKFYTAVALAIEERSGLMASPMIEMSHEGFGRVLFTAGRLVVLSKT CEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHCCHHHHHHH VRDVHRFGFETFCKLAAAGTKLVDDAIAAIDAYPEVARA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure MFEVAISPAVNDDEAALASPFVKCLVRLIRAQDTHGSWDGTADAELLADFIVSKERRRTI CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC PIIGDPDPDVLWRLDKFYTAVALAIEERSGLMASPMIEMSHEGFGRVLFTAGRLVVLSKT CEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHCCHHHHHHH VRDVHRFGFETFCKLAAAGTKLVDDAIAAIDAYPEVARA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]