Click here to switch to the map view.

The map label for this gene is nifX [H]

Identifier: 13474924

GI number: 13474924

Start: 4778822

End: 4779319

Strand: Direct

Name: nifX [H]

Synonym: mlr5911

Alternate gene names: 13474924

Gene position: 4778822-4779319 (Clockwise)

Preceding gene: 13474923

Following gene: 13474925

Centisome position: 67.92

GC content: 60.64

Gene sequence:

>498_bases
ATGAGCTCCGTTCGTCGCCTCTCACTCGTCACTGACGAGGTTCACGCACCGATGACGGACCGACGGGCAGGCGCATTGCG
CGTAGCCATCGCCACGCAAGACATGACGAATCTCAATGCCCATTTCGGGTCGGCCAAGCGCTTTGCTGTCTACGACGTGA
CGCGCGAGGAGTGGCATCTCGTGGAAGCCGTGGCCTTCGATGACGTTTCCGATGAGAGCGGGAAGCGTCGGACCGAGGGC
GATGACCGCGTCACGCCGAAGGTGGAGGCGCTGAAGGGCTGCCATCTGCTGTTTTGTCTGGCCATCGGCGGGCCTTCGGC
AGCCAAGGTTATTTCGGCAAAAATCCATCCAATCAAGGTGCCGCAGCCACAAACCATCCAAGAGGTGCTGTTGCGCACGC
AGATGATGCTGAGAACGTGTCCTCCGCCCTGGCTGCGCAAGGTGCTGGCCGAAGCTGGTGTCGCCGAAAAGAAACCCTCC
TTCGAGGACGAGGACTAA

Upstream 100 bases:

>100_bases
ACCCGCGACCTGATCTTCGATGTTGCCAATATCTTTCAGGCCAACCAGCACGCGCCGACGCCTGAGGCGCTTGATCCATT
CCGGAAACGAGAAATGCCAG

Downstream 100 bases:

>100_bases
AACGAGGAAGTGCAAAATGTTTGAAGTCGCGATCAGCCCTGCTGTCAACGATGACGAGGCCGCCCTTGCCAGCCCATTCG
TCAAATGCCTCGTGCGGCTG

Product: nitrogenase molybdenum-iron protein nifX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSSVRRLSLVTDEVHAPMTDRRAGALRVAIATQDMTNLNAHFGSAKRFAVYDVTREEWHLVEAVAFDDVSDESGKRRTEG
DDRVTPKVEALKGCHLLFCLAIGGPSAAKVISAKIHPIKVPQPQTIQEVLLRTQMMLRTCPPPWLRKVLAEAGVAEKKPS
FEDED

Sequences:

>Translated_165_residues
MSSVRRLSLVTDEVHAPMTDRRAGALRVAIATQDMTNLNAHFGSAKRFAVYDVTREEWHLVEAVAFDDVSDESGKRRTEG
DDRVTPKVEALKGCHLLFCLAIGGPSAAKVISAKIHPIKVPQPQTIQEVLLRTQMMLRTCPPPWLRKVLAEAGVAEKKPS
FEDED
>Mature_164_residues
SSVRRLSLVTDEVHAPMTDRRAGALRVAIATQDMTNLNAHFGSAKRFAVYDVTREEWHLVEAVAFDDVSDESGKRRTEGD
DRVTPKVEALKGCHLLFCLAIGGPSAAKVISAKIHPIKVPQPQTIQEVLLRTQMMLRTCPPPWLRKVLAEAGVAEKKPSF
EDED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifX/nifY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003731
- InterPro:   IPR013480 [H]

Pfam domain/function: PF02579 Nitro_FeMo-Co [H]

EC number: NA

Molecular weight: Translated: 18288; Mature: 18157

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVRRLSLVTDEVHAPMTDRRAGALRVAIATQDMTNLNAHFGSAKRFAVYDVTREEWHL
CCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCEEEEEECCHHHHHH
VEAVAFDDVSDESGKRRTEGDDRVTPKVEALKGCHLLFCLAIGGPSAAKVISAKIHPIKV
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCHHHEEECCCCEEEC
PQPQTIQEVLLRTQMMLRTCPPPWLRKVLAEAGVAEKKPSFEDED
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSVRRLSLVTDEVHAPMTDRRAGALRVAIATQDMTNLNAHFGSAKRFAVYDVTREEWHL
CCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCEEEEEECCHHHHHH
VEAVAFDDVSDESGKRRTEGDDRVTPKVEALKGCHLLFCLAIGGPSAAKVISAKIHPIKV
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCHHHEEECCCCEEEC
PQPQTIQEVLLRTQMMLRTCPPPWLRKVLAEAGVAEKKPSFEDED
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]