Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13473759

Identifier: 13473759

GI number: 13473759

Start: 3546598

End: 3547203

Strand: Direct

Name: 13473759

Synonym: mlr4460

Alternate gene names: NA

Gene position: 3546598-3547203 (Clockwise)

Preceding gene: 13473758

Following gene: 13473760

Centisome position: 50.41

GC content: 63.2

Gene sequence:

>606_bases
ATGAAAGACCTTTTTCGGAAAACCACCGGTATCTTGCCCGCTCTCGCCGTCGCGGCGTGCCTGGGCACGACAGCCCTCCT
GGCTCCGGTGCTTGGCAGCCTGCCGGCCTCGGCCGCCGAGAAGCCCATCCAGCCGGAGAAGAACCCGCCGGGCGACATCC
CCGATTCGCAGGTCTTCATCGACTACACCTCGCCGCTAGGGTTCACCCTGAAGGTGCCGGAAGGCTGGGCACGGTCGGAC
CGTGCCGACGGCGCAAGCTTCGTCGACAAGTTGGATGGCGTCGCGGTCACGGTTTCCAAGGCGGACGCCGCGCCCACTGT
CGACAGCGCCAAAGCGGACTATGTCGCCAAGCTCGAGGCGGCCGGGCGTGCTGTGAAGGTCAGCGCGGTCAAGCAGGTCA
AGCTGCCGGCCGGTACCGCGATCCGCATCGTCTACACATCGAACTCCGAGCCGAACGCGGTAACCAACCGGCAGGTTCGC
CTCGAAAACGAACGCTACCTCTATTTCAAGGACGGCAAGCTCGTTGCGCTCGAACTTTATGCACCCAAGGGCGCCGACAA
TGTCGATCAATGGCAATTGATGTCCAACTCGTTCCGGTGGAAGTGA

Upstream 100 bases:

>100_bases
GCGCCAATAGCTTACGAAAGGGTATGAGGCCGGCGACCCGCCCGTAAGCTTGCAGCGGCATAATGAATGGACCCAACCGT
CCATCGAAAGGCTGCGGAAA

Downstream 100 bases:

>100_bases
GATGCACGCGCTGGACGCGCATGAGATCTATCGCTTTTTCCATATAGGCGACGACGAGACGGCCGCCTTGCGAGGCGTCA
GTTTCCACATCGCCGCAGGC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKDLFRKTTGILPALAVAACLGTTALLAPVLGSLPASAAEKPIQPEKNPPGDIPDSQVFIDYTSPLGFTLKVPEGWARSD
RADGASFVDKLDGVAVTVSKADAAPTVDSAKADYVAKLEAAGRAVKVSAVKQVKLPAGTAIRIVYTSNSEPNAVTNRQVR
LENERYLYFKDGKLVALELYAPKGADNVDQWQLMSNSFRWK

Sequences:

>Translated_201_residues
MKDLFRKTTGILPALAVAACLGTTALLAPVLGSLPASAAEKPIQPEKNPPGDIPDSQVFIDYTSPLGFTLKVPEGWARSD
RADGASFVDKLDGVAVTVSKADAAPTVDSAKADYVAKLEAAGRAVKVSAVKQVKLPAGTAIRIVYTSNSEPNAVTNRQVR
LENERYLYFKDGKLVALELYAPKGADNVDQWQLMSNSFRWK
>Mature_201_residues
MKDLFRKTTGILPALAVAACLGTTALLAPVLGSLPASAAEKPIQPEKNPPGDIPDSQVFIDYTSPLGFTLKVPEGWARSD
RADGASFVDKLDGVAVTVSKADAAPTVDSAKADYVAKLEAAGRAVKVSAVKQVKLPAGTAIRIVYTSNSEPNAVTNRQVR
LENERYLYFKDGKLVALELYAPKGADNVDQWQLMSNSFRWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21535; Mature: 21535

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLFRKTTGILPALAVAACLGTTALLAPVLGSLPASAAEKPIQPEKNPPGDIPDSQVFI
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEE
DYTSPLGFTLKVPEGWARSDRADGASFVDKLDGVAVTVSKADAAPTVDSAKADYVAKLEA
EECCCCCEEEECCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
AGRAVKVSAVKQVKLPAGTAIRIVYTSNSEPNAVTNRQVRLENERYLYFKDGKLVALELY
CCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEE
APKGADNVDQWQLMSNSFRWK
CCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKDLFRKTTGILPALAVAACLGTTALLAPVLGSLPASAAEKPIQPEKNPPGDIPDSQVFI
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEE
DYTSPLGFTLKVPEGWARSDRADGASFVDKLDGVAVTVSKADAAPTVDSAKADYVAKLEA
EECCCCCEEEECCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
AGRAVKVSAVKQVKLPAGTAIRIVYTSNSEPNAVTNRQVRLENERYLYFKDGKLVALELY
CCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEE
APKGADNVDQWQLMSNSFRWK
CCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA