| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yleA [C]
Identifier: 13473651
GI number: 13473651
Start: 3437210
End: 3438550
Strand: Direct
Name: yleA [C]
Synonym: mlr4319
Alternate gene names: 13473651
Gene position: 3437210-3438550 (Clockwise)
Preceding gene: 13473650
Following gene: 13473652
Centisome position: 48.85
GC content: 64.88
Gene sequence:
>1341_bases ATGTCGGTTGCTCTGCCCAGGAGCCCGGACGTCGACGGCTCCCTTTCCGAGGCCCCCAACCGCATTGACGTGGTGACATT CGGCTGCCGGCTGAACACCTATGAATCCGAAGTGATGCGACGCGAGGCCGAAAGCGCCGGTCTTGGCGCGCTGCAAGGCG GCGCCGTGATCTTCAACACCTGCGCCGTCACCGGCGAGGCGGTGCGCCAGGCCAGGCAGGCGATCCGCAAGGCGCGCCGC GACAACCCTGGGGCGCGCATCATCGTCACCGGCTGCGCCGCGCAGACCGAGCCGGAAAAATTCGCCGCCATGGACGAGGT CGATCTCGTGCTTGGCAATGAAGAGAAGCTGAAGGCAAACTCGTACCGCGCGCTGCCGGATTTCGGCGTCAACGACACCG AGAAGGCCCGCGTCAACGACATCTTCTCGGTGCGCGAGACCGCCGGCCACATGGTCGACGCCATAGAAGGCCGCGCCCGC GCCTTCGTGCAGGTGCAGAATGGCTGCGACCACCGCTGCACCTTCTGCATCATTCCTTACGGTCGCGGCAATTCGCGCTC GGTGCCGATGGGCGCCGTGGTCGAGCAGGTCAAGCGGCTCGCCGGCAACGGCTATGCCGAGATCGTGCTGACCGGCGTCG ACATGACCAGCTTCGGCGCCGATCTGCCGGGAGCGCCAAAACTCGGCAGACTGGTGAAGACCATTCTGAAGCAGGTGCCT GACGTGAAGCGCCTGCGGCTATCTTCGATCGATTCCATCGAGGCCGACGACGATTTGCTCGATGCCATCGCCACCGAACC CAGGCTGATGCCGCATTTGCATCTGTCGTTACAGTCCGGCGACGACATGATCCTGAAGCGCATGAAGCGAAGGCATCTGC GCGACCAGTCGATCCGTTTCTGCGAGGATGTGCGCAAATTGCGTCCTGAAATCGTCTTCGGCGCCGACATCATCGCCGGC TTCCCGACCGAGACCGACGCCATGTTCGAGAACTCGATAAAAATCGTCGAGGAATGTGGCCTGACCCATCTCCATGTTTT CCCGTTTTCACCGCGCGAGGGCACGCCCGCCGCGCGCATGCCACAGGTCCGCCGCGAGGTGGTCAAGCAGCGCGCCGCCC GTTTGCGCGCCGCCGGCGAAGCCGCCTATCGGCGCCATCTGTCCTCGCTGCCTGGAACCCGTCAGTCGATCCTGATCGAG CGCGATGGTCTCGGTCGCACCGAAGGATTTACCCTCGCCGCACTCGGCACCGGCGCGCCCGGCGAGATCGTCGAAGCGAC AATTACTGGCCACGATGGCGCCCGGCTCAACGCAGTGCCGCTTGCCGCACGCGCCGCCTGA
Upstream 100 bases:
>100_bases ACGACCACGTCATCCTGACCGGTGCCGCCGAGTGGGAATTTTCCGGCAGCTTCGATCCCTCGACCGGCACCTGGGCCCGC GACACCGAAAGCGCGGCCTG
Downstream 100 bases:
>100_bases GAAACGCAAAGCATGGCTGGTTTTTTCAAGAAGATATTTTCGTTCGGCAAGAAAGAGGTTGTCGAGGAGCGCGTCGACGA GACCGCCCCGCTGCCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSVALPRSPDVDGSLSEAPNRIDVVTFGCRLNTYESEVMRREAESAGLGALQGGAVIFNTCAVTGEAVRQARQAIRKARR DNPGARIIVTGCAAQTEPEKFAAMDEVDLVLGNEEKLKANSYRALPDFGVNDTEKARVNDIFSVRETAGHMVDAIEGRAR AFVQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVEQVKRLAGNGYAEIVLTGVDMTSFGADLPGAPKLGRLVKTILKQVP DVKRLRLSSIDSIEADDDLLDAIATEPRLMPHLHLSLQSGDDMILKRMKRRHLRDQSIRFCEDVRKLRPEIVFGADIIAG FPTETDAMFENSIKIVEECGLTHLHVFPFSPREGTPAARMPQVRREVVKQRAARLRAAGEAAYRRHLSSLPGTRQSILIE RDGLGRTEGFTLAALGTGAPGEIVEATITGHDGARLNAVPLAARAA
Sequences:
>Translated_446_residues MSVALPRSPDVDGSLSEAPNRIDVVTFGCRLNTYESEVMRREAESAGLGALQGGAVIFNTCAVTGEAVRQARQAIRKARR DNPGARIIVTGCAAQTEPEKFAAMDEVDLVLGNEEKLKANSYRALPDFGVNDTEKARVNDIFSVRETAGHMVDAIEGRAR AFVQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVEQVKRLAGNGYAEIVLTGVDMTSFGADLPGAPKLGRLVKTILKQVP DVKRLRLSSIDSIEADDDLLDAIATEPRLMPHLHLSLQSGDDMILKRMKRRHLRDQSIRFCEDVRKLRPEIVFGADIIAG FPTETDAMFENSIKIVEECGLTHLHVFPFSPREGTPAARMPQVRREVVKQRAARLRAAGEAAYRRHLSSLPGTRQSILIE RDGLGRTEGFTLAALGTGAPGEIVEATITGHDGARLNAVPLAARAA >Mature_445_residues SVALPRSPDVDGSLSEAPNRIDVVTFGCRLNTYESEVMRREAESAGLGALQGGAVIFNTCAVTGEAVRQARQAIRKARRD NPGARIIVTGCAAQTEPEKFAAMDEVDLVLGNEEKLKANSYRALPDFGVNDTEKARVNDIFSVRETAGHMVDAIEGRARA FVQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVEQVKRLAGNGYAEIVLTGVDMTSFGADLPGAPKLGRLVKTILKQVPD VKRLRLSSIDSIEADDDLLDAIATEPRLMPHLHLSLQSGDDMILKRMKRRHLRDQSIRFCEDVRKLRPEIVFGADIIAGF PTETDAMFENSIKIVEECGLTHLHVFPFSPREGTPAARMPQVRREVVKQRAARLRAAGEAAYRRHLSSLPGTRQSILIER DGLGRTEGFTLAALGTGAPGEIVEATITGHDGARLNAVPLAARAA
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MTTase N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI93277076, Length=414, Percent_Identity=28.0193236714976, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI28872782, Length=375, Percent_Identity=24.8, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI28872784, Length=375, Percent_Identity=24.5333333333333, Blast_Score=122, Evalue=5e-28, Organism=Escherichia coli, GI1786882, Length=437, Percent_Identity=28.604118993135, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1787057, Length=367, Percent_Identity=29.700272479564, Blast_Score=145, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17553146, Length=463, Percent_Identity=28.5097192224622, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71996771, Length=367, Percent_Identity=26.158038147139, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI21356207, Length=426, Percent_Identity=26.7605633802817, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI19922432, Length=383, Percent_Identity=27.4151436031332, Blast_Score=141, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 48482; Mature: 48351
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVALPRSPDVDGSLSEAPNRIDVVTFGCRLNTYESEVMRREAESAGLGALQGGAVIFNT CCCCCCCCCCCCCCHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEE CAVTGEAVRQARQAIRKARRDNPGARIIVTGCAAQTEPEKFAAMDEVDLVLGNEEKLKAN HHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCEEEEECCCHHHCCC SYRALPDFGVNDTEKARVNDIFSVRETAGHMVDAIEGRARAFVQVQNGCDHRCTFCIIPY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCEEEEEEEC GRGNSRSVPMGAVVEQVKRLAGNGYAEIVLTGVDMTSFGADLPGAPKLGRLVKTILKQVP CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHCC DVKRLRLSSIDSIEADDDLLDAIATEPRLMPHLHLSLQSGDDMILKRMKRRHLRDQSIRF CHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHH CEDVRKLRPEIVFGADIIAGFPTETDAMFENSIKIVEECGLTHLHVFPFSPREGTPAARM HHHHHHHCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCC PQVRREVVKQRAARLRAAGEAAYRRHLSSLPGTRQSILIERDGLGRTEGFTLAALGTGAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCC GEIVEATITGHDGARLNAVPLAARAA CCEEEEEEECCCCCEEEEECCHHCCC >Mature Secondary Structure SVALPRSPDVDGSLSEAPNRIDVVTFGCRLNTYESEVMRREAESAGLGALQGGAVIFNT CCCCCCCCCCCCCHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEE CAVTGEAVRQARQAIRKARRDNPGARIIVTGCAAQTEPEKFAAMDEVDLVLGNEEKLKAN HHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCEEEEECCCHHHCCC SYRALPDFGVNDTEKARVNDIFSVRETAGHMVDAIEGRARAFVQVQNGCDHRCTFCIIPY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCEEEEEEEC GRGNSRSVPMGAVVEQVKRLAGNGYAEIVLTGVDMTSFGADLPGAPKLGRLVKTILKQVP CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHCC DVKRLRLSSIDSIEADDDLLDAIATEPRLMPHLHLSLQSGDDMILKRMKRRHLRDQSIRF CHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHH CEDVRKLRPEIVFGADIIAGFPTETDAMFENSIKIVEECGLTHLHVFPFSPREGTPAARM HHHHHHHCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCC PQVRREVVKQRAARLRAAGEAAYRRHLSSLPGTRQSILIERDGLGRTEGFTLAALGTGAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCC GEIVEATITGHDGARLNAVPLAARAA CCEEEEEEECCCCCEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]