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The map label for this gene is ftsY [H]

Identifier: 13473652

GI number: 13473652

Start: 3439454

End: 3440395

Strand: Direct

Name: ftsY [H]

Synonym: mlr4320

Alternate gene names: 13473652

Gene position: 3439454-3440395 (Clockwise)

Preceding gene: 13473651

Following gene: 13473653

Centisome position: 48.88

GC content: 66.03

Gene sequence:

>942_bases
GTGAAGGCACCGGAGCCGGCACCGCGGCGCTCCTGGTTCCAGCGCATGCGGGACGGGCTTGCCCGTTCCTCGCGCGAGCT
CACCGGCAACATCGCCGGCGTCTTCACCAAGCGCAAGCTGGACGAGGACACGCTGCAGGACCTCGAAGACGTGCTGATCC
GCGCCGATCTCGGCATGGAAACGGCGCTTCGTATCACCGACGCGCTGGCCGCCAGCCGCTACGGCAAGGACGTCTCCGAT
ACGGATGTCCGCACCGTCATGGCAGCCGAGGTGGAGAAGGTGCTGACCCCTGTCGCCCGGCCGCTGGAACTCGACCTCTC
ACACAAGCCGCATGTCATCCTGGTGGTCGGCGTCAACGGCACCGGCAAGACCACCACCATCGGCAAATTGGCGGCAAAAC
TGACCGATGGCGGCCTGTCGGTGATGCTCGCCGCCGGCGACACCTTCCGCGCCGCCGCGATCGAACAGCTGAAGATCTGG
GGCGAACGGACGAAATCGCCCGTCATCGCCTCCAAGCTCGGCGCCGATGCGGCCGGCCTCGCCTATGACGCCTTCGAGAA
GGCGAAGGAAGCCGGCTCCGACGTGCTGATCATCGACACCGCCGGCCGCCTGCAGAACAAGACCGAACTGATGGCGGAAC
TCGAGAAGATCGTGCGCGTGCTCGGCAAGCTCGATCCGGAAGCGCCGCACACGGTGCTGCAGACGGTCGACGCCACCACC
GGCCAGAACGCGCTCAACCAGGTCGAGATCTTCCGCAACATCGCCGGCGTCAACGGCCTGGTGATGACCAAGCTGGACGG
CACGGCGCGCGGCGGTATTCTGGTGGCGATCGCGGCAAAGCACAAACTGCCGGTCTATTTCATCGGCGTCGGCGAGCAGG
TCGACGACCTCGAACCTTTCTCCGCGAGCGAATTCGCCAGGGCGATCGCTGGAGTGGCGTAA

Upstream 100 bases:

>100_bases
CGCGCCCGAGCCGCAGCCCGTCCCACGACCGAAGCCGGAACCGAAACCCGCTCCCGGCAAGGTGACCGTCACCAAAAAGG
TCGAGCAGAAGGCCGAGCCG

Downstream 100 bases:

>100_bases
CGGCATGATCCCTTTTCAAGGGGATCGTGCGTAAGAAGGAAGATCATGAACCCACCCATTCTCGAACGCGATCCGTCCGA
CCCGCAGAAAGAGAAGAAGG

Product: cell division protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKAPEPAPRRSWFQRMRDGLARSSRELTGNIAGVFTKRKLDEDTLQDLEDVLIRADLGMETALRITDALAASRYGKDVSD
TDVRTVMAAEVEKVLTPVARPLELDLSHKPHVILVVGVNGTGKTTTIGKLAAKLTDGGLSVMLAAGDTFRAAAIEQLKIW
GERTKSPVIASKLGADAAGLAYDAFEKAKEAGSDVLIIDTAGRLQNKTELMAELEKIVRVLGKLDPEAPHTVLQTVDATT
GQNALNQVEIFRNIAGVNGLVMTKLDGTARGGILVAIAAKHKLPVYFIGVGEQVDDLEPFSASEFARAIAGVA

Sequences:

>Translated_313_residues
MKAPEPAPRRSWFQRMRDGLARSSRELTGNIAGVFTKRKLDEDTLQDLEDVLIRADLGMETALRITDALAASRYGKDVSD
TDVRTVMAAEVEKVLTPVARPLELDLSHKPHVILVVGVNGTGKTTTIGKLAAKLTDGGLSVMLAAGDTFRAAAIEQLKIW
GERTKSPVIASKLGADAAGLAYDAFEKAKEAGSDVLIIDTAGRLQNKTELMAELEKIVRVLGKLDPEAPHTVLQTVDATT
GQNALNQVEIFRNIAGVNGLVMTKLDGTARGGILVAIAAKHKLPVYFIGVGEQVDDLEPFSASEFARAIAGVA
>Mature_313_residues
MKAPEPAPRRSWFQRMRDGLARSSRELTGNIAGVFTKRKLDEDTLQDLEDVLIRADLGMETALRITDALAASRYGKDVSD
TDVRTVMAAEVEKVLTPVARPLELDLSHKPHVILVVGVNGTGKTTTIGKLAAKLTDGGLSVMLAAGDTFRAAAIEQLKIW
GERTKSPVIASKLGADAAGLAYDAFEKAKEAGSDVLIIDTAGRLQNKTELMAELEKIVRVLGKLDPEAPHTVLQTVDATT
GQNALNQVEIFRNIAGVNGLVMTKLDGTARGGILVAIAAKHKLPVYFIGVGEQVDDLEPFSASEFARAIAGVA

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=205, Percent_Identity=34.1463414634146, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI4507215, Length=204, Percent_Identity=34.3137254901961, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI295424842, Length=296, Percent_Identity=29.0540540540541, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI23308697, Length=296, Percent_Identity=29.0540540540541, Blast_Score=118, Evalue=6e-27,
Organism=Homo sapiens, GI89061728, Length=137, Percent_Identity=31.3868613138686, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI1789874, Length=302, Percent_Identity=47.0198675496689, Blast_Score=273, Evalue=1e-74,
Organism=Escherichia coli, GI1788963, Length=314, Percent_Identity=30.5732484076433, Blast_Score=128, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI17539958, Length=231, Percent_Identity=30.7359307359307, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI193206261, Length=300, Percent_Identity=32, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6325345, Length=221, Percent_Identity=34.841628959276, Blast_Score=136, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=303, Percent_Identity=26.7326732673267, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI17647949, Length=231, Percent_Identity=30.7359307359307, Blast_Score=128, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24641198, Length=294, Percent_Identity=29.2517006802721, Blast_Score=119, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33406; Mature: 33406

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPEPAPRRSWFQRMRDGLARSSRELTGNIAGVFTKRKLDEDTLQDLEDVLIRADLGME
CCCCCCCHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH
TALRITDALAASRYGKDVSDTDVRTVMAAEVEKVLTPVARPLELDLSHKPHVILVVGVNG
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECC
TGKTTTIGKLAAKLTDGGLSVMLAAGDTFRAAAIEQLKIWGERTKSPVIASKLGADAAGL
CCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHH
AYDAFEKAKEAGSDVLIIDTAGRLQNKTELMAELEKIVRVLGKLDPEAPHTVLQTVDATT
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
GQNALNQVEIFRNIAGVNGLVMTKLDGTARGGILVAIAAKHKLPVYFIGVGEQVDDLEPF
CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCC
SASEFARAIAGVA
CHHHHHHHHHCCC
>Mature Secondary Structure
MKAPEPAPRRSWFQRMRDGLARSSRELTGNIAGVFTKRKLDEDTLQDLEDVLIRADLGME
CCCCCCCHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH
TALRITDALAASRYGKDVSDTDVRTVMAAEVEKVLTPVARPLELDLSHKPHVILVVGVNG
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECC
TGKTTTIGKLAAKLTDGGLSVMLAAGDTFRAAAIEQLKIWGERTKSPVIASKLGADAAGL
CCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHH
AYDAFEKAKEAGSDVLIIDTAGRLQNKTELMAELEKIVRVLGKLDPEAPHTVLQTVDATT
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
GQNALNQVEIFRNIAGVNGLVMTKLDGTARGGILVAIAAKHKLPVYFIGVGEQVDDLEPF
CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCC
SASEFARAIAGVA
CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]