| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473510
Identifier: 13473510
GI number: 13473510
Start: 3305506
End: 3306297
Strand: Direct
Name: 13473510
Synonym: mlr4134
Alternate gene names: NA
Gene position: 3305506-3306297 (Clockwise)
Preceding gene: 13473509
Following gene: 13473511
Centisome position: 46.98
GC content: 66.92
Gene sequence:
>792_bases GTGACCTCGGCCGGGGTGGTGCTCGTCGGCGCCGATGGCTGCAAGGCCGGCTGGATCGCCGTGCGGCGCGAACTCGGTTC CACACCTCGTAGCCCCGGTTCAGCACCCTCTGTCGAGATTTTCGCCAGTTTCGCGGCGCTGCTTGCGGCCAGTCCCGACG ATGCGGTTGTCGCGGTCGACATGCCGATCGGCCTGCCCGAATTCTCCAGCAAGGGCGGCCGCGGACCGGAGGCGCTGGTC AGGCCGCTGCTCGGCGCGCGCCAGTCCAGCGTGTTTTCGATCCCGTCCCGCGCCGCGCTCTATTCCGACATCAGCGACTT CACCACAATCGAAGCCTGGTATGCCGCGCATGGCAGGGCAAGCGAGGTGGCAAGGGCCACATCCGACCCGCCGCGCGGCG TTTCCATCCAGGCCTTCGGCATCTTTTCGAAGATCCGCGAGATCGACGCCCTGCTGATCGCGCGGCCCGATCTGCGCGGC CGCGTCTTCGAATCGCATCCTGAAGTCGCCTTCTGCCGCCTGAATGGCGACCAGGCAATGCAGCTGCCGAAGAAGATCAA GGGCAGCGTCAATCCAGCCGGCATGGCGGAACGCAAGGCGCTGCTGTGCCGGCACGGCTATGCCATGGACTTCCTCGACC AGCCACCGCCGCGTGGCGCGGCCGCCGACGATTTCCTCGATGCGGCGGTCATGATGCTGATTGCCGGCCGCATCGCCAGC GGCAGCGCGAAGCCATTTCCCAACCCGCCACTCGCTGACGGTTTTGGCATACCGGTCGCCATCTGGGCATGA
Upstream 100 bases:
>100_bases GCGACGAGCTGCAGCTCGAAACCGATGCGCAGAGCCTGTCGCACCCGATGGCCATGGTGCAGTTGCGCCACCTCACGCAT CCGGGGCGGGACCGCCGGGC
Downstream 100 bases:
>100_bases CAGTGTCGGCGGACGCACCGCTTATACGCATGGCATTTGTAGCCAGCCCCCACAATTCTGCATTGCTCGCAACGGGCTTT TGCCGTTAGAGCCTTTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Nudix Hydrolase
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTSAGVVLVGADGCKAGWIAVRRELGSTPRSPGSAPSVEIFASFAALLAASPDDAVVAVDMPIGLPEFSSKGGRGPEALV RPLLGARQSSVFSIPSRAALYSDISDFTTIEAWYAAHGRASEVARATSDPPRGVSIQAFGIFSKIREIDALLIARPDLRG RVFESHPEVAFCRLNGDQAMQLPKKIKGSVNPAGMAERKALLCRHGYAMDFLDQPPPRGAAADDFLDAAVMMLIAGRIAS GSAKPFPNPPLADGFGIPVAIWA
Sequences:
>Translated_263_residues MTSAGVVLVGADGCKAGWIAVRRELGSTPRSPGSAPSVEIFASFAALLAASPDDAVVAVDMPIGLPEFSSKGGRGPEALV RPLLGARQSSVFSIPSRAALYSDISDFTTIEAWYAAHGRASEVARATSDPPRGVSIQAFGIFSKIREIDALLIARPDLRG RVFESHPEVAFCRLNGDQAMQLPKKIKGSVNPAGMAERKALLCRHGYAMDFLDQPPPRGAAADDFLDAAVMMLIAGRIAS GSAKPFPNPPLADGFGIPVAIWA >Mature_262_residues TSAGVVLVGADGCKAGWIAVRRELGSTPRSPGSAPSVEIFASFAALLAASPDDAVVAVDMPIGLPEFSSKGGRGPEALVR PLLGARQSSVFSIPSRAALYSDISDFTTIEAWYAAHGRASEVARATSDPPRGVSIQAFGIFSKIREIDALLIARPDLRGR VFESHPEVAFCRLNGDQAMQLPKKIKGSVNPAGMAERKALLCRHGYAMDFLDQPPPRGAAADDFLDAAVMMLIAGRIASG SAKPFPNPPLADGFGIPVAIWA
Specific function: Unknown
COG id: COG4923
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27583; Mature: 27452
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAGVVLVGADGCKAGWIAVRRELGSTPRSPGSAPSVEIFASFAALLAASPDDAVVAVD CCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE MPIGLPEFSSKGGRGPEALVRPLLGARQSSVFSIPSRAALYSDISDFTTIEAWYAAHGRA CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCH SEVARATSDPPRGVSIQAFGIFSKIREIDALLIARPDLRGRVFESHPEVAFCRLNGDQAM HHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHEEECCCCCCCEECCCCCEEEEEECCHHHH QLPKKIKGSVNPAGMAERKALLCRHGYAMDFLDQPPPRGAAADDFLDAAVMMLIAGRIAS HHHHHHCCCCCCCCHHHHHHHHHHCCCEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC GSAKPFPNPPLADGFGIPVAIWA CCCCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure TSAGVVLVGADGCKAGWIAVRRELGSTPRSPGSAPSVEIFASFAALLAASPDDAVVAVD CCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE MPIGLPEFSSKGGRGPEALVRPLLGARQSSVFSIPSRAALYSDISDFTTIEAWYAAHGRA CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCH SEVARATSDPPRGVSIQAFGIFSKIREIDALLIARPDLRGRVFESHPEVAFCRLNGDQAM HHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHEEECCCCCCCEECCCCCEEEEEECCHHHH QLPKKIKGSVNPAGMAERKALLCRHGYAMDFLDQPPPRGAAADDFLDAAVMMLIAGRIAS HHHHHHCCCCCCCCHHHHHHHHHHCCCEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC GSAKPFPNPPLADGFGIPVAIWA CCCCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA